RNA–Protein interactions for RNA: ENST00000423271.7

USB1-202, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2 BASIC

Gene USB1, Length 1,217 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-202ENST00000423271 H7BYZ3 331 aa10.68□□□□□ -0.7
USB1-202ENST00000423271 RTL8CO15255 209 aa10.68□□□□□ -0.7
USB1-202ENST00000423271 CSN1S1P47710 185 aa10.68□□□□□ -0.7
USB1-202ENST00000423271 LINC00336Q6ZUF6 198 aa10.68□□□□□ -0.7
USB1-202ENST00000423271 VGLL1Q99990 258 aa10.68□□□□□ -0.7
USB1-202ENST00000423271 RPH3ALQ9UNE2 315 aa10.68□□□□□ -0.7
USB1-202ENST00000423271 DIRC3C9JPN6 131 aa10.67□□□□□ -0.7
USB1-202ENST00000423271 F5H768 121 aa10.67□□□□□ -0.7
USB1-202ENST00000423271 LGALS9BQ3B8N2 356 aa10.67□□□□□ -0.7
USB1-202ENST00000423271 FAM74A1Q5RGS3 127 aa10.67□□□□□ -0.7
USB1-202ENST00000423271 C9orf47Q6ZRZ4 202 aa10.67□□□□□ -0.7
USB1-202ENST00000423271 C15orf53Q8NAA6 179 aa10.67□□□□□ -0.7
USB1-202ENST00000423271 RXFP4Q8TDU9 374 aa10.67□□□□□ -0.7
USB1-202ENST00000423271 TMEM263Q8WUH6 116 aaKnown RBP10.67□□□□□ -0.7
USB1-202ENST00000423271 ODF3Q96PU9 254 aa10.67□□□□□ -0.7
USB1-202ENST00000423271 NOP10Q9NPE3 64 aaKnown RBP10.67□□□□□ -0.7
USB1-202ENST00000423271 TIMM8BQ9Y5J9 83 aaPredicted RBP10.67□□□□□ -0.7
USB1-202ENST00000423271 A0A1B0GVY2 172 aa10.66□□□□□ -0.7
USB1-202ENST00000423271 SLC25A5P05141 298 aaKnown RBP10.66□□□□□ -0.7
USB1-202ENST00000423271 ATP5G1P05496 136 aa10.66□□□□□ -0.7
USB1-202ENST00000423271 LEPP41159 167 aa10.66□□□□□ -0.7
USB1-202ENST00000423271 ATP5G3P48201 142 aa10.66□□□□□ -0.7
USB1-202ENST00000423271 GNG5P63218 68 aa10.66□□□□□ -0.7
USB1-202ENST00000423271 RNF212Q495C1 297 aa10.66□□□□□ -0.7
USB1-202ENST00000423271 TMEM78Q5T7P6 136 aa10.66□□□□□ -0.7
USB1-202ENST00000423271 DPPA3Q6W0C5 159 aa10.66□□□□□ -0.7
USB1-202ENST00000423271 ZNF493Q6ZR52 646 aa10.66□□□□□ -0.7
USB1-202ENST00000423271 Q6ZR54 194 aa10.66□□□□□ -0.7
USB1-202ENST00000423271 CMTM2Q8TAZ6 248 aa10.66□□□□□ -0.7
USB1-202ENST00000423271 LINC00477Q96M19 166 aa10.66□□□□□ -0.7
USB1-202ENST00000423271 C20orf144Q9BQM9 153 aa10.66□□□□□ -0.7
USB1-202ENST00000423271 PCLOQ9Y6V0 5065 aa10.65□□□□□ -0.7
USB1-202ENST00000423271 TRAV12-3A0A0B4J271 114 aa10.65□□□□□ -0.7
USB1-202ENST00000423271 RBAKDNA6NC62 111 aa10.65□□□□□ -0.7
USB1-202ENST00000423271 CBY3A6NI87 242 aa10.65□□□□□ -0.7
USB1-202ENST00000423271 GGTLC3B5MD39 225 aa10.65□□□□□ -0.7
USB1-202ENST00000423271 UBE2G2P60604 165 aa10.65□□□□□ -0.7
USB1-202ENST00000423271 EIF5AL1Q6IS14 154 aaKnown RBP10.65□□□□□ -0.7
USB1-202ENST00000423271 Q8TAT8 98 aa10.65□□□□□ -0.7
USB1-202ENST00000423271 SFT2D1Q8WV19 159 aa10.65□□□□□ -0.7
USB1-202ENST00000423271 MBD3L1Q8WWY6 194 aa10.65□□□□□ -0.7
USB1-202ENST00000423271 FAM19A4Q96LR4 140 aa10.65□□□□□ -0.7
USB1-202ENST00000423271 ZNF492Q9P255 531 aa10.65□□□□□ -0.7
USB1-202ENST00000423271 RYR1P21817 5038 aa10.65□□□□□ -0.7
USB1-202ENST00000423271 A0A1B0GV50 99 aa10.64□□□□□ -0.71
USB1-202ENST00000423271 A0A1W2PRE2 83 aa10.64□□□□□ -0.71
USB1-202ENST00000423271 PRSS29PA6NIE9 313 aa10.64□□□□□ -0.71
USB1-202ENST00000423271 NUDT3O95989 172 aa10.64□□□□□ -0.71
USB1-202ENST00000423271 SULT1A2P50226 295 aa10.64□□□□□ -0.71
USB1-202ENST00000423271 SUMO1P63165 101 aaKnown RBP10.64□□□□□ -0.71
USB1-202ENST00000423271 GOLT1AQ6ZVE7 132 aa10.64□□□□□ -0.71
USB1-202ENST00000423271 ARL6IP6Q8N6S5 226 aa10.64□□□□□ -0.71
USB1-202ENST00000423271 C5orf17Q8NAS9 161 aa10.64□□□□□ -0.71
USB1-202ENST00000423271 FAM74A7A6NL05 159 aa10.63□□□□□ -0.71
USB1-202ENST00000423271 H2AFB1P0C5Y9 115 aa10.63□□□□□ -0.71
USB1-202ENST00000423271 RAB5CP51148 216 aa10.63□□□□□ -0.71
USB1-202ENST00000423271 ZNF138P52744 262 aa10.63□□□□□ -0.71
USB1-202ENST00000423271 LINC00612Q8N6U2 182 aa10.63□□□□□ -0.71
USB1-202ENST00000423271 TCRAP04437 139 aa10.62□□□□□ -0.71
USB1-202ENST00000423271 CRISP2P16562 243 aa10.62□□□□□ -0.71
USB1-202ENST00000423271 PRR9Q5T870 116 aa10.62□□□□□ -0.71
USB1-202ENST00000423271 CCDC28AQ8IWP9 274 aa10.62□□□□□ -0.71
USB1-202ENST00000423271 ZFAND2AQ8N6M9 145 aa10.62□□□□□ -0.71
USB1-202ENST00000423271 ATG101Q9BSB4 218 aa10.62□□□□□ -0.71
USB1-202ENST00000423271 LRP1BQ9NZR2 4599 aa10.61□□□□□ -0.71
USB1-202ENST00000423271 TRAV8-1A0A0A6YYK1 113 aa10.61□□□□□ -0.71
USB1-202ENST00000423271 GAGE12BA1L429 117 aa10.61□□□□□ -0.71
USB1-202ENST00000423271 C7orf71A4D174 169 aa10.61□□□□□ -0.71
USB1-202ENST00000423271 KLLNB2CW77 178 aa10.61□□□□□ -0.71
USB1-202ENST00000423271 GAGE7O76087 117 aa10.61□□□□□ -0.71
USB1-202ENST00000423271 GAGE12FP0CL80 117 aa10.61□□□□□ -0.71
USB1-202ENST00000423271 GAGE12GP0CL81 117 aa10.61□□□□□ -0.71
USB1-202ENST00000423271 GAGE12IP0CL82 117 aa10.61□□□□□ -0.71
USB1-202ENST00000423271 BTN1A1Q13410 526 aa10.61□□□□□ -0.71
USB1-202ENST00000423271 PYGO2Q9BRQ0 406 aa10.61□□□□□ -0.71
USB1-202ENST00000423271 EPDR1Q9UM22 224 aa10.61□□□□□ -0.71
USB1-202ENST00000423271 SNURFLB1AK76 121 aa10.6□□□□□ -0.71
USB1-202ENST00000423271 GPX1P07203 203 aa10.6□□□□□ -0.71
USB1-202ENST00000423271 HOXA5P20719 270 aa10.6□□□□□ -0.71
USB1-202ENST00000423271 RNASE4P34096 147 aaKnown RBP10.6□□□□□ -0.71
USB1-202ENST00000423271 ALKAL2Q6UX46 152 aa10.6□□□□□ -0.71
USB1-202ENST00000423271 SGK494Q96LW2 274 aa10.6□□□□□ -0.71
USB1-202ENST00000423271 TRBV7-9A0A0J9YWB2 115 aa10.59□□□□□ -0.71
USB1-202ENST00000423271 SERTM2A0A1B0GWG4 89 aa10.59□□□□□ -0.71
USB1-202ENST00000423271 PAGE4O60829 102 aa10.59□□□□□ -0.71
USB1-202ENST00000423271 IFNA7P01567 189 aa10.59□□□□□ -0.71
USB1-202ENST00000423271 NMBP08949 121 aa10.59□□□□□ -0.71
USB1-202ENST00000423271 FAM3BP58499 235 aaPredicted RBP10.59□□□□□ -0.71
USB1-202ENST00000423271 CCL20P78556 96 aa10.59□□□□□ -0.71
USB1-202ENST00000423271 OR5I1Q13606 314 aa10.59□□□□□ -0.71
USB1-202ENST00000423271 CST9LP1Q5W188 147 aa10.59□□□□□ -0.71
USB1-202ENST00000423271 Q6ZTI0 123 aa10.59□□□□□ -0.71
USB1-202ENST00000423271 CYB561D1Q8N8Q1 229 aa10.59□□□□□ -0.71
USB1-202ENST00000423271 ZNRF2Q8NHG8 242 aa10.59□□□□□ -0.71
USB1-202ENST00000423271 NKX6-2Q9C056 277 aaPredicted RBP10.59□□□□□ -0.71
USB1-202ENST00000423271 LINC00588Q9Y4M8 146 aa10.59□□□□□ -0.71
USB1-202ENST00000423271 LENEPQ9Y5L5 61 aa10.59□□□□□ -0.71
USB1-202ENST00000423271 TRAV26-1A0A087WT03 109 aa10.58□□□□□ -0.72
USB1-202ENST00000423271 TRAV1-1A0A0B4J248 108 aa10.58□□□□□ -0.72
USB1-202ENST00000423271 A0A0J9YY99 117 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms