RNA–Protein interactions for RNA: ENST00000422245.5

SQSTM1-203, Transcript of sequestosome 1, humanhuman

TSL 4

Gene SQSTM1, Length 628 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-203ENST00000422245 SPATA12Q7Z6I5 190 aa7.96□□□□□ -1.14
SQSTM1-203ENST00000422245 Q8TAT8 98 aa7.96□□□□□ -1.14
SQSTM1-203ENST00000422245 PPP1R1CQ8WVI7 109 aa7.96□□□□□ -1.14
SQSTM1-203ENST00000422245 MRPL16Q9NX20 251 aaKnown RBP7.96□□□□□ -1.14
SQSTM1-203ENST00000422245 LRP1BQ9NZR2 4599 aa7.95□□□□□ -1.14
SQSTM1-203ENST00000422245 H2BFSP57053 126 aa7.95□□□□□ -1.14
SQSTM1-203ENST00000422245 TAS2R45P59539 299 aa7.95□□□□□ -1.14
SQSTM1-203ENST00000422245 ZNF266Q14584 549 aa7.95□□□□□ -1.14
SQSTM1-203ENST00000422245 PRO0255Q9UI72 69 aa7.95□□□□□ -1.14
SQSTM1-203ENST00000422245 TP53TG3Q9ULZ0 132 aa7.95□□□□□ -1.14
SQSTM1-203ENST00000422245 HSPB11Q9Y547 144 aa7.95□□□□□ -1.14
SQSTM1-203ENST00000422245 LENEPQ9Y5L5 61 aa7.95□□□□□ -1.14
SQSTM1-203ENST00000422245 SIVA1O15304 175 aa7.94□□□□□ -1.14
SQSTM1-203ENST00000422245 SSNA1O43805 119 aa7.94□□□□□ -1.14
SQSTM1-203ENST00000422245 NXPH4O95158 308 aa7.94□□□□□ -1.14
SQSTM1-203ENST00000422245 IFNA5P01569 189 aa7.94□□□□□ -1.14
SQSTM1-203ENST00000422245 IGHV3-53P01767 116 aa7.94□□□□□ -1.14
SQSTM1-203ENST00000422245 LINC00315P59091 139 aa7.94□□□□□ -1.14
SQSTM1-203ENST00000422245 RANP62826 216 aaKnown RBP7.94□□□□□ -1.14
SQSTM1-203ENST00000422245 FFAR4Q5NUL3 377 aa7.94□□□□□ -1.14
SQSTM1-203ENST00000422245 MARVELD1Q9BSK0 173 aa7.94□□□□□ -1.14
SQSTM1-203ENST00000422245 HSPG2P98160 4391 aa7.93□□□□□ -1.14
SQSTM1-203ENST00000422245 TRGV11A0A075B6L2 103 aa7.93□□□□□ -1.14
SQSTM1-203ENST00000422245 MPC2O95563 127 aa7.93□□□□□ -1.14
SQSTM1-203ENST00000422245 DEFA1P59665 94 aa7.93□□□□□ -1.14
SQSTM1-203ENST00000422245 DEFA3P59666 94 aa7.93□□□□□ -1.14
SQSTM1-203ENST00000422245 IFITM3Q01628 133 aa7.93□□□□□ -1.14
SQSTM1-203ENST00000422245 Q6AWC8 147 aa7.93□□□□□ -1.14
SQSTM1-203ENST00000422245 Q6ZQT7 251 aa7.93□□□□□ -1.14
SQSTM1-203ENST00000422245 MAPKAPK5-AS1Q8N8E1 139 aa7.93□□□□□ -1.14
SQSTM1-203ENST00000422245 SCGB1C1Q8TD33 95 aa7.93□□□□□ -1.14
SQSTM1-203ENST00000422245 TMED6Q8WW62 240 aa7.93□□□□□ -1.14
SQSTM1-203ENST00000422245 PTTG2Q9NZH5 202 aa7.93□□□□□ -1.14
SQSTM1-203ENST00000422245 DIRC3C9JPN6 131 aa7.92□□□□□ -1.14
SQSTM1-203ENST00000422245 RPL12P30050 165 aaKnown RBP7.92□□□□□ -1.14
SQSTM1-203ENST00000422245 CRYBA4P53673 196 aa7.92□□□□□ -1.14
SQSTM1-203ENST00000422245 MRPL23Q16540 153 aaKnown RBP7.92□□□□□ -1.14
SQSTM1-203ENST00000422245 MUC21Q5SSG8 566 aa7.92□□□□□ -1.14
SQSTM1-203ENST00000422245 FAM159AQ6UWV7 190 aa7.92□□□□□ -1.14
SQSTM1-203ENST00000422245 C8orf49Q96NF6 230 aa7.92□□□□□ -1.14
SQSTM1-203ENST00000422245 SPXQ9BT56 116 aa7.92□□□□□ -1.14
SQSTM1-203ENST00000422245 KRTAP4-5Q9BYR2 181 aa7.92□□□□□ -1.14
SQSTM1-203ENST00000422245 OTORQ9NRC9 128 aa7.92□□□□□ -1.14
SQSTM1-203ENST00000422245 MBD2Q9UBB5 411 aa7.92□□□□□ -1.14
SQSTM1-203ENST00000422245 HHLA3Q9XRX5 114 aa7.92□□□□□ -1.14
SQSTM1-203ENST00000422245 DNAH5Q8TE73 4624 aa7.92□□□□□ -1.14
SQSTM1-203ENST00000422245 TRGV4A0A0C4DH28 118 aa7.91□□□□□ -1.14
SQSTM1-203ENST00000422245 KRTAP10-2P60368 255 aa7.91□□□□□ -1.14
SQSTM1-203ENST00000422245 FHL2Q14192 279 aa7.91□□□□□ -1.14
SQSTM1-203ENST00000422245 TMEM183BQ1AE95 376 aa7.91□□□□□ -1.14
SQSTM1-203ENST00000422245 FAM74A1Q5RGS3 127 aa7.91□□□□□ -1.14
SQSTM1-203ENST00000422245 PQLC2Q6ZP29 291 aa7.91□□□□□ -1.14
SQSTM1-203ENST00000422245 Q6ZRN7 208 aaPredicted RBP7.91□□□□□ -1.14
SQSTM1-203ENST00000422245 NEGR1Q7Z3B1 354 aa7.91□□□□□ -1.14
SQSTM1-203ENST00000422245 TMEM183AQ8IXX5 376 aa7.91□□□□□ -1.14
SQSTM1-203ENST00000422245 OR10G4Q8NGN3 311 aa7.91□□□□□ -1.14
SQSTM1-203ENST00000422245 CMTM2Q8TAZ6 248 aa7.91□□□□□ -1.14
SQSTM1-203ENST00000422245 PCNPQ8WW12 178 aaKnown RBP7.91□□□□□ -1.14
SQSTM1-203ENST00000422245 RASL10AQ92737 203 aa7.91□□□□□ -1.14
SQSTM1-203ENST00000422245 SMIM3Q9BZL3 60 aa7.91□□□□□ -1.14
SQSTM1-203ENST00000422245 ORM1P02763 201 aa7.9□□□□□ -1.14
SQSTM1-203ENST00000422245 SRIP30626 198 aa7.9□□□□□ -1.14
SQSTM1-203ENST00000422245 ERVFC1-1P60608 527 aa7.9□□□□□ -1.14
SQSTM1-203ENST00000422245 ACOT6Q3I5F7 207 aaPredicted RBP7.9□□□□□ -1.14
SQSTM1-203ENST00000422245 TDRG1Q3Y452 100 aa7.9□□□□□ -1.14
SQSTM1-203ENST00000422245 NFE4Q86UQ8 179 aa7.9□□□□□ -1.14
SQSTM1-203ENST00000422245 IQCF2Q8IXL9 164 aa7.9□□□□□ -1.14
SQSTM1-203ENST00000422245 Q8N1X5 172 aa7.9□□□□□ -1.14
SQSTM1-203ENST00000422245 ARL6IP6Q8N6S5 226 aa7.9□□□□□ -1.14
SQSTM1-203ENST00000422245 HYLS1Q96M11 299 aa7.9□□□□□ -1.14
SQSTM1-203ENST00000422245 MDFICQ9P1T7 246 aa7.9□□□□□ -1.14
SQSTM1-203ENST00000422245 TRAV9-2A0A087WT02 112 aa7.89□□□□□ -1.15
SQSTM1-203ENST00000422245 A6NHS1 94 aa7.89□□□□□ -1.15
SQSTM1-203ENST00000422245 K7EP13 123 aa7.89□□□□□ -1.15
SQSTM1-203ENST00000422245 EREGO14944 169 aa7.89□□□□□ -1.15
SQSTM1-203ENST00000422245 LYPD5Q6UWN5 251 aa7.89□□□□□ -1.15
SQSTM1-203ENST00000422245 ZNF479Q96JC4 524 aa7.89□□□□□ -1.15
SQSTM1-203ENST00000422245 NAGKQ9UJ70 344 aa7.89□□□□□ -1.15
SQSTM1-203ENST00000422245 RPH3ALQ9UNE2 315 aa7.89□□□□□ -1.15
SQSTM1-203ENST00000422245 APOBP04114 4563 aaKnown RBP7.89□□□□□ -1.15
SQSTM1-203ENST00000422245 TRAV4A0A0B4J268 109 aa7.88□□□□□ -1.15
SQSTM1-203ENST00000422245 TRAV21A0A0B4J279 112 aa7.88□□□□□ -1.15
SQSTM1-203ENST00000422245 A0A1W2PPV4 95 aa7.88□□□□□ -1.15
SQSTM1-203ENST00000422245 PGPA6NDG6 321 aa7.88□□□□□ -1.15
SQSTM1-203ENST00000422245 C9JCJ5 164 aa7.88□□□□□ -1.15
SQSTM1-203ENST00000422245 K7EQD1 137 aa7.88□□□□□ -1.15
SQSTM1-203ENST00000422245 SFTA3P0C7M3 94 aa7.88□□□□□ -1.15
SQSTM1-203ENST00000422245 GYPEP15421 78 aa7.88□□□□□ -1.15
SQSTM1-203ENST00000422245 CDPF1Q6NVV7 123 aa7.88□□□□□ -1.15
SQSTM1-203ENST00000422245 GOLT1AQ6ZVE7 132 aa7.88□□□□□ -1.15
SQSTM1-203ENST00000422245 TXNDC17Q9BRA2 123 aa7.88□□□□□ -1.15
SQSTM1-203ENST00000422245 WFDC1Q9HC57 220 aa7.88□□□□□ -1.15
SQSTM1-203ENST00000422245 LY96Q9Y6Y9 160 aa7.88□□□□□ -1.15
SQSTM1-203ENST00000422245 IGHV3-16A0A0C4DH30 117 aa7.87□□□□□ -1.15
SQSTM1-203ENST00000422245 SERTM2A0A1B0GWG4 89 aa7.87□□□□□ -1.15
SQSTM1-203ENST00000422245 M0R2P5 195 aa7.87□□□□□ -1.15
SQSTM1-203ENST00000422245 RAB2AP61019 212 aa7.87□□□□□ -1.15
SQSTM1-203ENST00000422245 OR4C5Q8NGB2 326 aa7.87□□□□□ -1.15
SQSTM1-203ENST00000422245 SDF2L1Q9HCN8 221 aa7.87□□□□□ -1.15
SQSTM1-203ENST00000422245 TREM1Q9NP99 234 aa7.87□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms