RNA–Protein interactions for RNA: ENST00000421870.1

LINC01840-201, Transcript of long intergenic non-protein coding RNA 1840, humanhuman

TSL 4 BASIC

Gene LINC01840, Length 571 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01840-201ENST00000421870 SH3BGRL3Q9H299 93 aa10.38□□□□□ -0.75
LINC01840-201ENST00000421870 IGHV1OR15-1A0A075B7D0 117 aa10.37□□□□□ -0.75
LINC01840-201ENST00000421870 BORCS7-ASMTA0A0B4J1R7 106 aa10.37□□□□□ -0.75
LINC01840-201ENST00000421870 SPINK4O60575 86 aa10.37□□□□□ -0.75
LINC01840-201ENST00000421870 HOXA5P20719 270 aa10.37□□□□□ -0.75
LINC01840-201ENST00000421870 TCL1AP56279 114 aa10.37□□□□□ -0.75
LINC01840-201ENST00000421870 FAM3BP58499 235 aaPredicted RBP10.37□□□□□ -0.75
LINC01840-201ENST00000421870 Q6AWC8 147 aa10.37□□□□□ -0.75
LINC01840-201ENST00000421870 Q6ZTI0 123 aa10.37□□□□□ -0.75
LINC01840-201ENST00000421870 ST6GAL2Q96JF0 529 aa10.37□□□□□ -0.75
LINC01840-201ENST00000421870 TP53TG3Q9ULZ0 132 aa10.37□□□□□ -0.75
LINC01840-201ENST00000421870 KLF12Q9Y4X4 402 aa10.37□□□□□ -0.75
LINC01840-201ENST00000421870 DNAH17Q9UFH2 4485 aa10.36□□□□□ -0.75
LINC01840-201ENST00000421870 TAAR5O14804 337 aa10.36□□□□□ -0.75
LINC01840-201ENST00000421870 RGS13O14921 159 aa10.36□□□□□ -0.75
LINC01840-201ENST00000421870 GCHFRP30047 84 aa10.36□□□□□ -0.75
LINC01840-201ENST00000421870 UBE2DNLQ8IWF7 75 aa10.36□□□□□ -0.75
LINC01840-201ENST00000421870 ACTR3CQ9C0K3 210 aaPredicted RBP10.36□□□□□ -0.75
LINC01840-201ENST00000421870 H3BNG1 76 aa10.35□□□□□ -0.75
LINC01840-201ENST00000421870 NUDT3O95989 172 aa10.35□□□□□ -0.75
LINC01840-201ENST00000421870 CXorf1O96002 111 aa10.35□□□□□ -0.75
LINC01840-201ENST00000421870 OR5I1Q13606 314 aa10.35□□□□□ -0.75
LINC01840-201ENST00000421870 Q6ZR54 194 aa10.35□□□□□ -0.75
LINC01840-201ENST00000421870 GOLT1AQ6ZVE7 132 aa10.35□□□□□ -0.75
LINC01840-201ENST00000421870 TVP23CQ96ET8 276 aa10.35□□□□□ -0.75
LINC01840-201ENST00000421870 CYTL1Q9NRR1 136 aa10.35□□□□□ -0.75
LINC01840-201ENST00000421870 FAT2Q9NYQ8 4349 aa10.35□□□□□ -0.75
LINC01840-201ENST00000421870 TRAV26-1A0A087WT03 109 aa10.34□□□□□ -0.75
LINC01840-201ENST00000421870 SERTM2A0A1B0GWG4 89 aa10.34□□□□□ -0.75
LINC01840-201ENST00000421870 TMPRSS5Q9H3S3 457 aa10.34□□□□□ -0.75
LINC01840-201ENST00000421870 TMEM167BQ9NRX6 74 aa10.34□□□□□ -0.75
LINC01840-201ENST00000421870 MUC4Q99102 2169 aa10.33□□□□□ -0.76
LINC01840-201ENST00000421870 M0R2N4 97 aa10.33□□□□□ -0.76
LINC01840-201ENST00000421870 ARPC5O15511 151 aa10.33□□□□□ -0.76
LINC01840-201ENST00000421870 SUMO1P63165 101 aaKnown RBP10.33□□□□□ -0.76
LINC01840-201ENST00000421870 ZNF726P1Q15940 193 aa10.33□□□□□ -0.76
LINC01840-201ENST00000421870 TDRG1Q3Y452 100 aa10.33□□□□□ -0.76
LINC01840-201ENST00000421870 LINC00336Q6ZUF6 198 aa10.33□□□□□ -0.76
LINC01840-201ENST00000421870 SSX7Q7RTT5 188 aa10.33□□□□□ -0.76
LINC01840-201ENST00000421870 C5orf17Q8NAS9 161 aa10.33□□□□□ -0.76
LINC01840-201ENST00000421870 ARPC5LQ9BPX5 153 aa10.33□□□□□ -0.76
LINC01840-201ENST00000421870 MDFICQ9P1T7 246 aa10.33□□□□□ -0.76
LINC01840-201ENST00000421870 RPH3ALQ9UNE2 315 aa10.33□□□□□ -0.76
LINC01840-201ENST00000421870 TRGV2A0A075B6R0 118 aa10.32□□□□□ -0.76
LINC01840-201ENST00000421870 TRGV1A0A0A0MS02 117 aa10.32□□□□□ -0.76
LINC01840-201ENST00000421870 TRAV8-1A0A0A6YYK1 113 aa10.32□□□□□ -0.76
LINC01840-201ENST00000421870 TCRAP04437 139 aa10.32□□□□□ -0.76
LINC01840-201ENST00000421870 CCL18P55774 89 aa10.32□□□□□ -0.76
LINC01840-201ENST00000421870 GNG5P63218 68 aa10.32□□□□□ -0.76
LINC01840-201ENST00000421870 MUC21Q5SSG8 566 aa10.32□□□□□ -0.76
LINC01840-201ENST00000421870 FAM159AQ6UWV7 190 aa10.32□□□□□ -0.76
LINC01840-201ENST00000421870 ZNRF2Q8NHG8 242 aa10.32□□□□□ -0.76
LINC01840-201ENST00000421870 ATG101Q9BSB4 218 aa10.32□□□□□ -0.76
LINC01840-201ENST00000421870 TREM1Q9NP99 234 aa10.32□□□□□ -0.76
LINC01840-201ENST00000421870 EPDR1Q9UM22 224 aa10.32□□□□□ -0.76
LINC01840-201ENST00000421870 IGLV2-18A0A075B6J9 118 aa10.31□□□□□ -0.76
LINC01840-201ENST00000421870 TRAV21A0A0B4J279 112 aa10.31□□□□□ -0.76
LINC01840-201ENST00000421870 CTXND1A0A1B0GTU2 59 aa10.31□□□□□ -0.76
LINC01840-201ENST00000421870 A0A1W2PRE2 83 aa10.31□□□□□ -0.76
LINC01840-201ENST00000421870 HMSDA8MTL9 139 aa10.31□□□□□ -0.76
LINC01840-201ENST00000421870 SMLR1H3BR10 107 aa10.31□□□□□ -0.76
LINC01840-201ENST00000421870 IGLV2-11P01706 119 aa10.31□□□□□ -0.76
LINC01840-201ENST00000421870 ZNF415Q09FC8 603 aa10.31□□□□□ -0.76
LINC01840-201ENST00000421870 VSIG2Q96IQ7 327 aa10.31□□□□□ -0.76
LINC01840-201ENST00000421870 LINC00588Q9Y4M8 146 aa10.31□□□□□ -0.76
LINC01840-201ENST00000421870 HECTD4Q9Y4D8 3996 aa10.3□□□□□ -0.76
LINC01840-201ENST00000421870 A0A0J9YY99 117 aa10.3□□□□□ -0.76
LINC01840-201ENST00000421870 GGTLC3B5MD39 225 aa10.3□□□□□ -0.76
LINC01840-201ENST00000421870 RTL8CO15255 209 aa10.3□□□□□ -0.76
LINC01840-201ENST00000421870 ZNF345Q14585 488 aa10.3□□□□□ -0.76
LINC01840-201ENST00000421870 KCNRGQ8N5I3 272 aa10.3□□□□□ -0.76
LINC01840-201ENST00000421870 RASL10AQ92737 203 aa10.3□□□□□ -0.76
LINC01840-201ENST00000421870 SGK494Q96LW2 274 aa10.3□□□□□ -0.76
LINC01840-201ENST00000421870 SPXQ9BT56 116 aa10.3□□□□□ -0.76
LINC01840-201ENST00000421870 TRGV11A0A075B6L2 103 aa10.29□□□□□ -0.76
LINC01840-201ENST00000421870 K7EQM0 130 aa10.29□□□□□ -0.76
LINC01840-201ENST00000421870 GNRH2O43555 120 aa10.29□□□□□ -0.76
LINC01840-201ENST00000421870 AKR1C8PQ5T2L2 129 aa10.29□□□□□ -0.76
LINC01840-201ENST00000421870 OR11H4Q8NGC9 324 aa10.29□□□□□ -0.76
LINC01840-201ENST00000421870 MRPL16Q9NX20 251 aaKnown RBP10.29□□□□□ -0.76
LINC01840-201ENST00000421870 PSG8Q9UQ74 426 aa10.29□□□□□ -0.76
LINC01840-201ENST00000421870 A0A096LPF7 62 aa10.28□□□□□ -0.76
LINC01840-201ENST00000421870 FBLL1A6NHQ2 334 aaKnown RBP10.28□□□□□ -0.76
LINC01840-201ENST00000421870 SLAQ13239 276 aa10.28□□□□□ -0.76
LINC01840-201ENST00000421870 FHL2Q14192 279 aa10.28□□□□□ -0.76
LINC01840-201ENST00000421870 TMEM183BQ1AE95 376 aa10.28□□□□□ -0.76
LINC01840-201ENST00000421870 ESRGQ1W209 222 aa10.28□□□□□ -0.76
LINC01840-201ENST00000421870 IQCF2Q8IXL9 164 aa10.28□□□□□ -0.76
LINC01840-201ENST00000421870 TMEM183AQ8IXX5 376 aa10.28□□□□□ -0.76
LINC01840-201ENST00000421870 NDFIP1Q9BT67 221 aa10.28□□□□□ -0.76
LINC01840-201ENST00000421870 PKD1P98161 4303 aa10.27□□□□□ -0.76
LINC01840-201ENST00000421870 IGHV3-16A0A0C4DH30 117 aa10.27□□□□□ -0.77
LINC01840-201ENST00000421870 F6UZH7 168 aa10.27□□□□□ -0.77
LINC01840-201ENST00000421870 ZNF80P51504 273 aaPredicted RBP10.27□□□□□ -0.77
LINC01840-201ENST00000421870 FLI1Q01543 452 aaPredicted RBP10.27□□□□□ -0.77
LINC01840-201ENST00000421870 CYB561D1Q8N8Q1 229 aa10.27□□□□□ -0.77
LINC01840-201ENST00000421870 TMEM75Q8N9X5 138 aa10.27□□□□□ -0.77
LINC01840-201ENST00000421870 KCNS1Q96KK3 526 aa10.27□□□□□ -0.77
LINC01840-201ENST00000421870 NKX6-2Q9C056 277 aaPredicted RBP10.27□□□□□ -0.77
LINC01840-201ENST00000421870 PRO0255Q9UI72 69 aa10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 88.8 ms