RNA–Protein interactions for RNA: ENST00000420973.5

CHRD-204, Transcript of chordin, humanhuman

TSL 1 (best)

Gene CHRD, Length 3,492 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRD-204ENST00000420973 TMEM167BQ9NRX6 74 aa11.48□□□□□ -0.57
CHRD-204ENST00000420973 FASNP49327 2511 aaKnown RBP11.48□□□□□ -0.57
CHRD-204ENST00000420973 C12orf74Q32Q52 190 aa11.48□□□□□ -0.57
CHRD-204ENST00000420973 PPP1R27Q86WC6 154 aa11.48□□□□□ -0.57
CHRD-204ENST00000420973 WIPF2Q8TF74 440 aaPredicted RBP11.48□□□□□ -0.57
CHRD-204ENST00000420973 TMEM262E9PQX1 116 aa11.48□□□□□ -0.57
CHRD-204ENST00000420973 ZNF688P0C7X2 276 aa11.48□□□□□ -0.57
CHRD-204ENST00000420973 LINC00694P0DN24 101 aa11.48□□□□□ -0.57
CHRD-204ENST00000420973 NRGNQ92686 78 aa11.48□□□□□ -0.57
CHRD-204ENST00000420973 ANKRD17O75179 2603 aaKnown RBP11.48□□□□□ -0.57
CHRD-204ENST00000420973 TIMM23O14925 209 aa11.47□□□□□ -0.57
CHRD-204ENST00000420973 A0A1W2PPR1 153 aa11.47□□□□□ -0.57
CHRD-204ENST00000420973 COX7A2P2O60397 106 aa11.47□□□□□ -0.57
CHRD-204ENST00000420973 IL4P05112 153 aa11.47□□□□□ -0.57
CHRD-204ENST00000420973 RPL7P18124 248 aaKnown RBP11.47□□□□□ -0.57
CHRD-204ENST00000420973 WT1-ASQ06250 92 aa11.47□□□□□ -0.57
CHRD-204ENST00000420973 SRSF1Q07955 248 aaKnown RBP eCLIP11.47□□□□□ -0.575e-7■□□□□ 10.1
CHRD-204ENST00000420973 TMEM155Q4W5P6 130 aa11.47□□□□□ -0.57
CHRD-204ENST00000420973 KLF12Q9Y4X4 402 aa11.47□□□□□ -0.57
CHRD-204ENST00000420973 ZANQ9Y493 2812 aa11.47□□□□□ -0.57
CHRD-204ENST00000420973 RHODO00212 210 aa11.47□□□□□ -0.57
CHRD-204ENST00000420973 PYYP10082 97 aa11.47□□□□□ -0.57
CHRD-204ENST00000420973 CEND1Q8N111 149 aa11.47□□□□□ -0.57
CHRD-204ENST00000420973 TMEM14BQ9NUH8 114 aa11.47□□□□□ -0.57
CHRD-204ENST00000420973 C19orf84I3L1E1 186 aa11.46□□□□□ -0.57
CHRD-204ENST00000420973 RPL27AP46776 148 aaKnown RBP11.46□□□□□ -0.57
CHRD-204ENST00000420973 DLX4Q92988 240 aaPredicted RBP11.46□□□□□ -0.57
CHRD-204ENST00000420973 SORL1Q92673 2214 aa11.46□□□□□ -0.58
CHRD-204ENST00000420973 GGTLC3B5MD39 225 aa11.46□□□□□ -0.58
CHRD-204ENST00000420973 PRCDQ00LT1 54 aa11.45□□□□□ -0.58
CHRD-204ENST00000420973 C3orf36Q3SXR2 165 aa11.45□□□□□ -0.58
CHRD-204ENST00000420973 IGKV1OR2-108A0A075B7D4 117 aa11.45□□□□□ -0.58
CHRD-204ENST00000420973 MPDU1O75352 247 aa11.45□□□□□ -0.58
CHRD-204ENST00000420973 PRSS1P07477 247 aa11.45□□□□□ -0.58
CHRD-204ENST00000420973 SCGB1C2P0DMR2 95 aa11.45□□□□□ -0.58
CHRD-204ENST00000420973 LYZP61626 148 aa11.45□□□□□ -0.58
CHRD-204ENST00000420973 UBE2L3P68036 154 aaKnown RBP11.45□□□□□ -0.58
CHRD-204ENST00000420973 RRN3P1Q2M238 152 aa11.45□□□□□ -0.58
CHRD-204ENST00000420973 GTSCR1Q86UQ5 136 aa11.45□□□□□ -0.58
CHRD-204ENST00000420973 SLC25A33Q9BSK2 321 aa11.45□□□□□ -0.58
CHRD-204ENST00000420973 AMMECR1Q9Y4X0 333 aaPredicted RBP11.45□□□□□ -0.58
CHRD-204ENST00000420973 CENPVL3A0A0U1RRI6 287 aa11.45□□□□□ -0.58
CHRD-204ENST00000420973 ASCL2Q99929 193 aa11.45□□□□□ -0.58
CHRD-204ENST00000420973 DKK2Q9UBU2 259 aa11.45□□□□□ -0.58
CHRD-204ENST00000420973 FOXA2Q9Y261 457 aaPredicted RBP11.45□□□□□ -0.58
CHRD-204ENST00000420973 A0A1W2PPI3 338 aa11.44□□□□□ -0.58
CHRD-204ENST00000420973 IGLV2-8P01709 118 aa11.44□□□□□ -0.58
CHRD-204ENST00000420973 P01737 135 aa11.44□□□□□ -0.58
CHRD-204ENST00000420973 MRPL36Q9P0J6 103 aaKnown RBP11.44□□□□□ -0.58
CHRD-204ENST00000420973 EDA2RQ9HAV5 297 aa11.44□□□□□ -0.58
CHRD-204ENST00000420973 TRBV25-1A0A075B6N4 114 aa11.44□□□□□ -0.58
CHRD-204ENST00000420973 IGHV1-3A0A0C4DH29 117 aa11.44□□□□□ -0.58
CHRD-204ENST00000420973 MORN5Q5VZ52 161 aa11.44□□□□□ -0.58
CHRD-204ENST00000420973 C10orf126Q8N4M7 172 aa11.44□□□□□ -0.58
CHRD-204ENST00000420973 PRO0461Q9UI25 63 aa11.44□□□□□ -0.58
CHRD-204ENST00000420973 LINC00527Q9UJ94 153 aa11.44□□□□□ -0.58
CHRD-204ENST00000420973 RNASE2P10153 161 aaKnown RBP11.43□□□□□ -0.58
CHRD-204ENST00000420973 Q6ZQT7 251 aa11.43□□□□□ -0.58
CHRD-204ENST00000420973 FAM106CPP0CH98 169 aa11.43□□□□□ -0.58
CHRD-204ENST00000420973 IFI27P40305 119 aaPredicted RBP11.43□□□□□ -0.58
CHRD-204ENST00000420973 SUB1P53999 127 aaKnown RBP eCLIP11.43□□□□□ -0.58
CHRD-204ENST00000420973 FAM106AQ4KMX7 169 aa11.43□□□□□ -0.58
CHRD-204ENST00000420973 RASL11BQ9BPW5 248 aa11.43□□□□□ -0.58
CHRD-204ENST00000420973 CELSR2Q9HCU4 2923 aa11.43□□□□□ -0.58
CHRD-204ENST00000420973 LINC01548A6NM66 108 aa11.43□□□□□ -0.58
CHRD-204ENST00000420973 A8MWV9 139 aa11.43□□□□□ -0.58
CHRD-204ENST00000420973 ZNF833PQ6ZTB9 187 aa11.43□□□□□ -0.58
CHRD-204ENST00000420973 ATP5L2Q7Z4Y8 100 aa11.43□□□□□ -0.58
CHRD-204ENST00000420973 BPESC1Q9GZL8 116 aa11.43□□□□□ -0.58
CHRD-204ENST00000420973 IGHV3OR16-13A0A075B7E8 117 aa11.42□□□□□ -0.58
CHRD-204ENST00000420973 IGHV3-74A0A0B4J1X5 117 aa11.42□□□□□ -0.58
CHRD-204ENST00000420973 CRLF1O75462 422 aa11.42□□□□□ -0.58
CHRD-204ENST00000420973 TMEM126AQ9H061 195 aa11.42□□□□□ -0.58
CHRD-204ENST00000420973 IGKV2D-26A0A0A0MRZ7 120 aa11.42□□□□□ -0.58
CHRD-204ENST00000420973 F5H768 121 aa11.42□□□□□ -0.58
CHRD-204ENST00000420973 FAM19A5Q7Z5A7 132 aaPredicted RBP11.42□□□□□ -0.58
CHRD-204ENST00000420973 TEN1Q86WV5 123 aa11.42□□□□□ -0.58
CHRD-204ENST00000420973 MAPK1IP1LQ8NDC0 245 aa11.42□□□□□ -0.58
CHRD-204ENST00000420973 PHLDA1Q8WV24 401 aaPredicted RBP11.42□□□□□ -0.58
CHRD-204ENST00000420973 IFI27L1Q96BM0 104 aa11.42□□□□□ -0.58
CHRD-204ENST00000420973 BUB1B-PAK6H3BSN5 160 aa11.41□□□□□ -0.58
CHRD-204ENST00000420973 RUSC1-AS1Q66K80 236 aa11.41□□□□□ -0.58
CHRD-204ENST00000420973 Q8N7P7 452 aa11.41□□□□□ -0.58
CHRD-204ENST00000420973 CHCHD5Q9BSY4 110 aa11.41□□□□□ -0.58
CHRD-204ENST00000420973 CIARTQ8N365 385 aaPredicted RBP11.41□□□□□ -0.58
CHRD-204ENST00000420973 CD69Q07108 199 aa11.41□□□□□ -0.58
CHRD-204ENST00000420973 LOXL1Q08397 574 aaPredicted RBP11.41□□□□□ -0.58
CHRD-204ENST00000420973 ECSCRQ19T08 205 aa11.41□□□□□ -0.58
CHRD-204ENST00000420973 PDPNQ86YL7 162 aa11.41□□□□□ -0.58
CHRD-204ENST00000420973 OR13C6PQ8NH95 151 aa11.41□□□□□ -0.58
CHRD-204ENST00000420973 CSMD2Q7Z408 3487 aa11.41□□□□□ -0.58
CHRD-204ENST00000420973 HOXA3O43365 443 aaPredicted RBP11.4□□□□□ -0.58
CHRD-204ENST00000420973 GNG5P63218 68 aa11.4□□□□□ -0.58
CHRD-204ENST00000420973 CFAP126Q5VTH2 177 aa11.4□□□□□ -0.58
CHRD-204ENST00000420973 ATP6V0E2Q8NHE4 81 aa11.4□□□□□ -0.58
CHRD-204ENST00000420973 SRSF12Q8WXF0 261 aaKnown RBP11.4□□□□□ -0.58
CHRD-204ENST00000420973 EPDR1Q9UM22 224 aa11.4□□□□□ -0.58
CHRD-204ENST00000420973 LGALS9BQ3B8N2 356 aa11.4□□□□□ -0.58
CHRD-204ENST00000420973 C9orf153Q5TBE3 101 aa11.4□□□□□ -0.58
CHRD-204ENST00000420973 LGALS9CQ6DKI2 356 aa11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 77.4 ms