RNA–Protein interactions for RNA: ENST00000420503.1

LINC00339-203, long intergenic non-protein coding RNA 339, humanhuman

TSL 3

Gene LINC00339, Length 771 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-203ENST00000420503 HBG2P69892 147 aa8.68□□□□□ -1.02
LINC00339-203ENST00000420503 BAXQ07812 192 aa8.68□□□□□ -1.02
LINC00339-203ENST00000420503 Q5BKY6 102 aa8.68□□□□□ -1.02
LINC00339-203ENST00000420503 PXDC1Q5TGL8 231 aa8.68□□□□□ -1.02
LINC00339-203ENST00000420503 ZNF680Q8NEM1 530 aa8.68□□□□□ -1.02
LINC00339-203ENST00000420503 Q8TAT8 98 aa8.68□□□□□ -1.02
LINC00339-203ENST00000420503 CHAC2Q8WUX2 184 aa8.68□□□□□ -1.02
LINC00339-203ENST00000420503 SLC25A31Q9H0C2 315 aa8.68□□□□□ -1.02
LINC00339-203ENST00000420503 DNAJC4Q9NNZ3 241 aa8.68□□□□□ -1.02
LINC00339-203ENST00000420503 FAM30AQ9NZY2 134 aa8.68□□□□□ -1.02
LINC00339-203ENST00000420503 WDR83OSQ9Y284 106 aa8.68□□□□□ -1.02
LINC00339-203ENST00000420503 TRBV19A0A075B6N1 114 aa8.67□□□□□ -1.02
LINC00339-203ENST00000420503 G3V3Q6 166 aa8.67□□□□□ -1.02
LINC00339-203ENST00000420503 IFNA5P01569 189 aa8.67□□□□□ -1.02
LINC00339-203ENST00000420503 GCSHP23434 173 aa8.67□□□□□ -1.02
LINC00339-203ENST00000420503 ATP6V1FQ16864 119 aa8.67□□□□□ -1.02
LINC00339-203ENST00000420503 ANXA2RQ3ZCQ2 193 aa8.67□□□□□ -1.02
LINC00339-203ENST00000420503 OR5C1Q8NGR4 320 aa8.67□□□□□ -1.02
LINC00339-203ENST00000420503 BLNKQ8WV28 456 aa8.67□□□□□ -1.02
LINC00339-203ENST00000420503 UQCC1Q9NVA1 299 aa8.67□□□□□ -1.02
LINC00339-203ENST00000420503 MSRB1Q9NZV6 116 aa8.67□□□□□ -1.02
LINC00339-203ENST00000420503 LOC100131303A0A0U1RQF7 123 aa8.66□□□□□ -1.02
LINC00339-203ENST00000420503 UBE2L5PA0A1B0GUS4 154 aa8.66□□□□□ -1.02
LINC00339-203ENST00000420503 K7EQD1 137 aa8.66□□□□□ -1.02
LINC00339-203ENST00000420503 MPDU1O75352 247 aa8.66□□□□□ -1.02
LINC00339-203ENST00000420503 RPL12P30050 165 aaKnown RBP8.66□□□□□ -1.02
LINC00339-203ENST00000420503 MUC21Q5SSG8 566 aa8.66□□□□□ -1.02
LINC00339-203ENST00000420503 S100A7AQ86SG5 101 aa8.66□□□□□ -1.02
LINC00339-203ENST00000420503 ZNF479Q96JC4 524 aa8.66□□□□□ -1.02
LINC00339-203ENST00000420503 PRO0255Q9UI72 69 aa8.66□□□□□ -1.02
LINC00339-203ENST00000420503 HHLA3Q9XRX5 114 aa8.66□□□□□ -1.02
LINC00339-203ENST00000420503 HSPB11Q9Y547 144 aa8.66□□□□□ -1.02
LINC00339-203ENST00000420503 LY96Q9Y6Y9 160 aa8.66□□□□□ -1.02
LINC00339-203ENST00000420503 RGS13O14921 159 aa8.65□□□□□ -1.02
LINC00339-203ENST00000420503 CRISP2P16562 243 aa8.65□□□□□ -1.02
LINC00339-203ENST00000420503 FAM122CQ6P4D5 195 aa8.65□□□□□ -1.02
LINC00339-203ENST00000420503 Q6ZNX1 250 aa8.65□□□□□ -1.02
LINC00339-203ENST00000420503 THAP6Q8TBB0 222 aa8.65□□□□□ -1.02
LINC00339-203ENST00000420503 SLC39A9Q9NUM3 307 aa8.65□□□□□ -1.02
LINC00339-203ENST00000420503 IGHV1OR15-1A0A075B7D0 117 aa8.64□□□□□ -1.03
LINC00339-203ENST00000420503 LRCOL1A6NCL2 159 aa8.64□□□□□ -1.03
LINC00339-203ENST00000420503 GPX1P07203 203 aa8.64□□□□□ -1.03
LINC00339-203ENST00000420503 ZNF415Q09FC8 603 aa8.64□□□□□ -1.03
LINC00339-203ENST00000420503 MRPL23Q16540 153 aaKnown RBP8.64□□□□□ -1.03
LINC00339-203ENST00000420503 GUK1Q16774 197 aa8.64□□□□□ -1.03
LINC00339-203ENST00000420503 IBA57Q5T440 356 aaKnown RBP8.64□□□□□ -1.03
LINC00339-203ENST00000420503 Q6ZSN1 163 aa8.64□□□□□ -1.03
LINC00339-203ENST00000420503 NEGR1Q7Z3B1 354 aa8.64□□□□□ -1.03
LINC00339-203ENST00000420503 OR2T35Q8NGX2 323 aa8.64□□□□□ -1.03
LINC00339-203ENST00000420503 MRPL53Q96EL3 112 aaKnown RBP8.64□□□□□ -1.03
LINC00339-203ENST00000420503 AQP10Q96PS8 301 aa8.64□□□□□ -1.03
LINC00339-203ENST00000420503 SLC25A2Q9BXI2 301 aa8.64□□□□□ -1.03
LINC00339-203ENST00000420503 RNF24Q9Y225 148 aa8.64□□□□□ -1.03
LINC00339-203ENST00000420503 LRP1Q07954 4544 aaKnown RBP8.63□□□□□ -1.03
LINC00339-203ENST00000420503 IGLV5-52A0A0A0MRZ9 124 aa8.63□□□□□ -1.03
LINC00339-203ENST00000420503 ZNF253O75346 499 aa8.63□□□□□ -1.03
LINC00339-203ENST00000420503 GYPEP15421 78 aa8.63□□□□□ -1.03
LINC00339-203ENST00000420503 RPL29P47914 159 aaKnown RBP8.63□□□□□ -1.03
LINC00339-203ENST00000420503 WFDC2Q14508 124 aa8.63□□□□□ -1.03
LINC00339-203ENST00000420503 Q6ZRG5 221 aa8.63□□□□□ -1.03
LINC00339-203ENST00000420503 C9orf47Q6ZRZ4 202 aa8.63□□□□□ -1.03
LINC00339-203ENST00000420503 MIR17HGQ75NE6 70 aa8.63□□□□□ -1.03
LINC00339-203ENST00000420503 NFE4Q86UQ8 179 aa8.63□□□□□ -1.03
LINC00339-203ENST00000420503 ATP5SQ99766 215 aa8.63□□□□□ -1.03
LINC00339-203ENST00000420503 NPCDR1Q9BY65 106 aa8.63□□□□□ -1.03
LINC00339-203ENST00000420503 WDR61Q9GZS3 305 aaKnown RBP8.63□□□□□ -1.03
LINC00339-203ENST00000420503 HMCN2Q8NDA2 5059 aa8.62□□□□□ -1.03
LINC00339-203ENST00000420503 TRGV4A0A0C4DH28 118 aa8.62□□□□□ -1.03
LINC00339-203ENST00000420503 RNF222A6NCQ9 220 aa8.62□□□□□ -1.03
LINC00339-203ENST00000420503 J3QL48 77 aa8.62□□□□□ -1.03
LINC00339-203ENST00000420503 CRYGDP07320 174 aa8.62□□□□□ -1.03
LINC00339-203ENST00000420503 HIST1H1EP10412 219 aaKnown RBP8.62□□□□□ -1.03
LINC00339-203ENST00000420503 FGF7P21781 194 aa8.62□□□□□ -1.03
LINC00339-203ENST00000420503 SRIP30626 198 aa8.62□□□□□ -1.03
LINC00339-203ENST00000420503 RAB31Q13636 194 aa8.62□□□□□ -1.03
LINC00339-203ENST00000420503 OR1L4Q8NGR5 311 aa8.62□□□□□ -1.03
LINC00339-203ENST00000420503 FAM167A-AS1Q96KT0 104 aa8.62□□□□□ -1.03
LINC00339-203ENST00000420503 LINC00477Q96M19 166 aa8.62□□□□□ -1.03
LINC00339-203ENST00000420503 ARPC5LQ9BPX5 153 aa8.62□□□□□ -1.03
LINC00339-203ENST00000420503 MRPL32Q9BYC8 188 aaKnown RBP8.62□□□□□ -1.03
LINC00339-203ENST00000420503 WFDC1Q9HC57 220 aa8.62□□□□□ -1.03
LINC00339-203ENST00000420503 TMEM14CQ9P0S9 112 aa8.62□□□□□ -1.03
LINC00339-203ENST00000420503 ZNF492Q9P255 531 aa8.62□□□□□ -1.03
LINC00339-203ENST00000420503 TNFSF18Q9UNG2 199 aa8.62□□□□□ -1.03
LINC00339-203ENST00000420503 TIMM9Q9Y5J7 89 aa8.62□□□□□ -1.03
LINC00339-203ENST00000420503 PHYHIPLQ96FC7 376 aa8.61□□□□□ -1.03
LINC00339-203ENST00000420503 SMIM3Q9BZL3 60 aa8.61□□□□□ -1.03
LINC00339-203ENST00000420503 IGHV3-16A0A0C4DH30 117 aa8.6□□□□□ -1.03
LINC00339-203ENST00000420503 FAM229AH3BQW9 127 aa8.6□□□□□ -1.03
LINC00339-203ENST00000420503 SMLR1H3BR10 107 aa8.6□□□□□ -1.03
LINC00339-203ENST00000420503 EIF3GO75821 320 aaKnown RBP eCLIP8.6□□□□□ -1.03
LINC00339-203ENST00000420503 OR10J4P0C629 311 aa8.6□□□□□ -1.03
LINC00339-203ENST00000420503 TMEM183BQ1AE95 376 aa8.6□□□□□ -1.03
LINC00339-203ENST00000420503 TMEM183AQ8IXX5 376 aa8.6□□□□□ -1.03
LINC00339-203ENST00000420503 Q8N3U1 123 aa8.6□□□□□ -1.03
LINC00339-203ENST00000420503 PFDN5Q99471 154 aa8.6□□□□□ -1.03
LINC00339-203ENST00000420503 Q9HAA7 133 aa8.6□□□□□ -1.03
LINC00339-203ENST00000420503 UBR4Q5T4S7 5183 aa8.6□□□□□ -1.03
LINC00339-203ENST00000420503 FXYD6-FXYD2A0A087WZ82 144 aa8.59□□□□□ -1.03
LINC00339-203ENST00000420503 EVI2AP22794 236 aa8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms