RNA–Protein interactions for RNA: ENST00000419220.1

LINC02539-202, Transcript of long intergenic non-protein coding RNA 2539, humanhuman

TSL 2

Gene LINC02539, Length 703 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02539-202ENST00000419220 ZNF705FA8MVS1 300 aaPredicted RBP4.91□□□□□ -1.62
LINC02539-202ENST00000419220 ZNF705EA8MWA4 302 aaPredicted RBP4.91□□□□□ -1.62
LINC02539-202ENST00000419220 F6UB75 175 aa4.91□□□□□ -1.62
LINC02539-202ENST00000419220 G3V3Q6 166 aa4.91□□□□□ -1.62
LINC02539-202ENST00000419220 H3BTX0 84 aa4.91□□□□□ -1.62
LINC02539-202ENST00000419220 SNRPCP09234 159 aaKnown RBP4.91□□□□□ -1.62
LINC02539-202ENST00000419220 SPART-AS1P0CW21 52 aa4.91□□□□□ -1.62
LINC02539-202ENST00000419220 FHITP49789 147 aa4.91□□□□□ -1.62
LINC02539-202ENST00000419220 TAS2R60P59551 318 aa4.91□□□□□ -1.62
LINC02539-202ENST00000419220 UBE2G1P62253 170 aa4.91□□□□□ -1.62
LINC02539-202ENST00000419220 SPINK13Q1W4C9 94 aa4.91□□□□□ -1.62
LINC02539-202ENST00000419220 CST9LP1Q5W188 147 aa4.91□□□□□ -1.62
LINC02539-202ENST00000419220 IGFL4Q6B9Z1 124 aa4.91□□□□□ -1.62
LINC02539-202ENST00000419220 C11orf45Q8TAV5 145 aa4.91□□□□□ -1.62
LINC02539-202ENST00000419220 MBD3L1Q8WWY6 194 aa4.91□□□□□ -1.62
LINC02539-202ENST00000419220 C16orf74Q96GX8 76 aa4.91□□□□□ -1.62
LINC02539-202ENST00000419220 PYGO2Q9BRQ0 406 aa4.91□□□□□ -1.62
LINC02539-202ENST00000419220 C11orf68Q9H3H3 251 aaKnown RBP4.91□□□□□ -1.62
LINC02539-202ENST00000419220 RPH3ALQ9UNE2 315 aa4.91□□□□□ -1.62
LINC02539-202ENST00000419220 AGRNO00468 2067 aa4.9□□□□□ -1.62
LINC02539-202ENST00000419220 NBEAL2Q6ZNJ1 2754 aa4.9□□□□□ -1.62
LINC02539-202ENST00000419220 GAGE12BA1L429 117 aa4.9□□□□□ -1.63
LINC02539-202ENST00000419220 GAGE12HA6NDE8 117 aa4.9□□□□□ -1.63
LINC02539-202ENST00000419220 NUPR2A6NF83 97 aa4.9□□□□□ -1.63
LINC02539-202ENST00000419220 SNURFLB1AK76 121 aa4.9□□□□□ -1.63
LINC02539-202ENST00000419220 SLC17A3O00476 420 aa4.9□□□□□ -1.63
LINC02539-202ENST00000419220 TRIAP1O43715 76 aa4.9□□□□□ -1.63
LINC02539-202ENST00000419220 NDUFB4O95168 129 aa4.9□□□□□ -1.63
LINC02539-202ENST00000419220 CT45A10P0DMU9 189 aa4.9□□□□□ -1.63
LINC02539-202ENST00000419220 SULT1A2P50226 295 aa4.9□□□□□ -1.63
LINC02539-202ENST00000419220 FXYD7P58549 80 aa4.9□□□□□ -1.63
LINC02539-202ENST00000419220 GDF5OSQ5U4N7 250 aa4.9□□□□□ -1.63
LINC02539-202ENST00000419220 FAM159AQ6UWV7 190 aa4.9□□□□□ -1.63
LINC02539-202ENST00000419220 CYB561D1Q8N8Q1 229 aa4.9□□□□□ -1.63
LINC02539-202ENST00000419220 ZNF680Q8NEM1 530 aa4.9□□□□□ -1.63
LINC02539-202ENST00000419220 MUC7Q8TAX7 377 aa4.9□□□□□ -1.63
LINC02539-202ENST00000419220 KCNS1Q96KK3 526 aa4.9□□□□□ -1.63
LINC02539-202ENST00000419220 ATG101Q9BSB4 218 aa4.9□□□□□ -1.63
LINC02539-202ENST00000419220 KRTAP3-1Q9BYR8 98 aa4.9□□□□□ -1.63
LINC02539-202ENST00000419220 SLC35B3Q9H1N7 401 aa4.9□□□□□ -1.63
LINC02539-202ENST00000419220 BIN3Q9NQY0 253 aa4.9□□□□□ -1.63
LINC02539-202ENST00000419220 ZNF492Q9P255 531 aa4.9□□□□□ -1.63
LINC02539-202ENST00000419220 EPDR1Q9UM22 224 aa4.9□□□□□ -1.63
LINC02539-202ENST00000419220 TRAV21A0A0B4J279 112 aa4.89□□□□□ -1.63
LINC02539-202ENST00000419220 A0A0J9YWU9 116 aa4.89□□□□□ -1.63
LINC02539-202ENST00000419220 C7orf71A4D174 169 aa4.89□□□□□ -1.63
LINC02539-202ENST00000419220 LYRM9A8MSI8 78 aa4.89□□□□□ -1.63
LINC02539-202ENST00000419220 M0R2Z0 102 aa4.89□□□□□ -1.63
LINC02539-202ENST00000419220 M0R3E3 92 aa4.89□□□□□ -1.63
LINC02539-202ENST00000419220 PDE6DO43924 150 aa4.89□□□□□ -1.63
LINC02539-202ENST00000419220 TNFRSF6BO95407 300 aa4.89□□□□□ -1.63
LINC02539-202ENST00000419220 TCRAP04437 139 aa4.89□□□□□ -1.63
LINC02539-202ENST00000419220 ZNF705DP0CH99 300 aaPredicted RBP4.89□□□□□ -1.63
LINC02539-202ENST00000419220 ZNF705BP0CI00 300 aaPredicted RBP4.89□□□□□ -1.63
LINC02539-202ENST00000419220 HTN1P15515 57 aa4.89□□□□□ -1.63
LINC02539-202ENST00000419220 CRISP2P16562 243 aa4.89□□□□□ -1.63
LINC02539-202ENST00000419220 HLA-DMBP28068 263 aa4.89□□□□□ -1.63
LINC02539-202ENST00000419220 RNASE4P34096 147 aaKnown RBP4.89□□□□□ -1.63
LINC02539-202ENST00000419220 TCTAP57738 103 aa4.89□□□□□ -1.63
LINC02539-202ENST00000419220 SMUG1Q53HV7 270 aa4.89□□□□□ -1.63
LINC02539-202ENST00000419220 ZNF705AQ6ZN79 300 aaPredicted RBP4.89□□□□□ -1.63
LINC02539-202ENST00000419220 GOLT1AQ6ZVE7 132 aa4.89□□□□□ -1.63
LINC02539-202ENST00000419220 TMEM75Q8N9X5 138 aa4.89□□□□□ -1.63
LINC02539-202ENST00000419220 FMC1Q96HJ9 113 aa4.89□□□□□ -1.63
LINC02539-202ENST00000419220 AGPAT4-IT1Q9H0P7 198 aa4.89□□□□□ -1.63
LINC02539-202ENST00000419220 TREM1Q9NP99 234 aa4.89□□□□□ -1.63
LINC02539-202ENST00000419220 ZFP30Q9Y2G7 519 aa4.89□□□□□ -1.63
LINC02539-202ENST00000419220 TIMM8BQ9Y5J9 83 aaPredicted RBP4.89□□□□□ -1.63
LINC02539-202ENST00000419220 PRKDCP78527 4128 aaKnown RBP4.88□□□□□ -1.63
LINC02539-202ENST00000419220 COL7A1Q02388 2944 aa4.88□□□□□ -1.63
LINC02539-202ENST00000419220 TRAV1-1A0A0B4J248 108 aa4.88□□□□□ -1.63
LINC02539-202ENST00000419220 TRAV12-3A0A0B4J271 114 aa4.88□□□□□ -1.63
LINC02539-202ENST00000419220 CBY3A6NI87 242 aa4.88□□□□□ -1.63
LINC02539-202ENST00000419220 FAM74A7A6NL05 159 aa4.88□□□□□ -1.63
LINC02539-202ENST00000419220 AKR1C3P42330 323 aa4.88□□□□□ -1.63
LINC02539-202ENST00000419220 FGF8P55075 233 aaPredicted RBP4.88□□□□□ -1.63
LINC02539-202ENST00000419220 UBE2G2P60604 165 aa4.88□□□□□ -1.63
LINC02539-202ENST00000419220 RAB14P61106 215 aa4.88□□□□□ -1.63
LINC02539-202ENST00000419220 FLI1Q01543 452 aaPredicted RBP4.88□□□□□ -1.63
LINC02539-202ENST00000419220 AMTNQ6UX39 209 aa4.88□□□□□ -1.63
LINC02539-202ENST00000419220 C9orf62Q8N4C0 152 aa4.88□□□□□ -1.63
LINC02539-202ENST00000419220 EIF4E3Q8N5X7 224 aaKnown RBP4.88□□□□□ -1.63
LINC02539-202ENST00000419220 CSNK1G2-AS1Q8NCQ2 148 aa4.88□□□□□ -1.63
LINC02539-202ENST00000419220 TMEM263Q8WUH6 116 aaKnown RBP4.88□□□□□ -1.63
LINC02539-202ENST00000419220 ZNF503Q96F45 646 aa4.88□□□□□ -1.63
LINC02539-202ENST00000419220 RETNQ9HD89 108 aa4.88□□□□□ -1.63
LINC02539-202ENST00000419220 TRAV12-2A0A075B6T6 113 aa4.87□□□□□ -1.63
LINC02539-202ENST00000419220 IGKV2-40A0A087WW87 121 aaPredicted RBP4.87□□□□□ -1.63
LINC02539-202ENST00000419220 TRAV10A0A0B4J240 114 aa4.87□□□□□ -1.63
LINC02539-202ENST00000419220 IGHV4-28A0A0C4DH34 117 aa4.87□□□□□ -1.63
LINC02539-202ENST00000419220 FABP5P3A8MUU1 101 aa4.87□□□□□ -1.63
LINC02539-202ENST00000419220 PRAC2D3DTV9 90 aa4.87□□□□□ -1.63
LINC02539-202ENST00000419220 J3KRW8 73 aa4.87□□□□□ -1.63
LINC02539-202ENST00000419220 PEX7O00628 323 aa4.87□□□□□ -1.63
LINC02539-202ENST00000419220 PAGE4O60829 102 aa4.87□□□□□ -1.63
LINC02539-202ENST00000419220 IGKV2D-40P01614 121 aaPredicted RBP4.87□□□□□ -1.63
LINC02539-202ENST00000419220 EMP1P54849 157 aa4.87□□□□□ -1.63
LINC02539-202ENST00000419220 DAD1P61803 113 aa4.87□□□□□ -1.63
LINC02539-202ENST00000419220 ERCC8Q13216 396 aa4.87□□□□□ -1.63
LINC02539-202ENST00000419220 PRNTQ86SH4 94 aa4.87□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms