RNA–Protein interactions for RNA: ENST00000418882.2

HMGB1P49-201, Transcript of high mobility group box 1 pseudogene 49, humanhuman

BASIC

Gene HMGB1P49, Length 569 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P49-201ENST00000418882 CPS1P31327 1500 aa1.41□□□□□ -2.18
HMGB1P49-201ENST00000418882 NRXN3Q9Y4C0 1643 aa1.41□□□□□ -2.18
HMGB1P49-201ENST00000418882 RICTORQ6R327 1708 aa1.41□□□□□ -2.18
HMGB1P49-201ENST00000418882 DOCK2Q92608 1830 aa1.41□□□□□ -2.18
HMGB1P49-201ENST00000418882 C5orf58C9J3I9 102 aa1.41□□□□□ -2.18
HMGB1P49-201ENST00000418882 SDCBPO00560 298 aaPredicted RBP1.41□□□□□ -2.18
HMGB1P49-201ENST00000418882 OR1I1O60431 355 aa1.41□□□□□ -2.18
HMGB1P49-201ENST00000418882 ZNF737O75373 536 aa1.41□□□□□ -2.18
HMGB1P49-201ENST00000418882 TCRAP04437 139 aa1.41□□□□□ -2.18
HMGB1P49-201ENST00000418882 SLC25A5P05141 298 aaKnown RBP1.41□□□□□ -2.18
HMGB1P49-201ENST00000418882 PAEPP09466 180 aa1.41□□□□□ -2.18
HMGB1P49-201ENST00000418882 IGLC6P0CF74 106 aa1.41□□□□□ -2.18
HMGB1P49-201ENST00000418882 MGST1P10620 155 aaKnown RBP1.41□□□□□ -2.18
HMGB1P49-201ENST00000418882 CRYGSP22914 178 aa1.41□□□□□ -2.18
HMGB1P49-201ENST00000418882 TMEM258P61165 79 aa1.41□□□□□ -2.18
HMGB1P49-201ENST00000418882 GNG11P61952 73 aa1.41□□□□□ -2.18
HMGB1P49-201ENST00000418882 ERHP84090 104 aaKnown RBP1.41□□□□□ -2.18
HMGB1P49-201ENST00000418882 MYL5Q02045 173 aa1.41□□□□□ -2.18
HMGB1P49-201ENST00000418882 KLRD1Q13241 179 aa1.41□□□□□ -2.18
HMGB1P49-201ENST00000418882 SPCS2Q15005 226 aa1.41□□□□□ -2.18
HMGB1P49-201ENST00000418882 TMEM155Q4W5P6 130 aa1.41□□□□□ -2.18
HMGB1P49-201ENST00000418882 C1orf134Q5TEV5 83 aa1.41□□□□□ -2.18
HMGB1P49-201ENST00000418882 IFT20Q8IY31 132 aa1.41□□□□□ -2.18
HMGB1P49-201ENST00000418882 MMGT1Q8N4V1 131 aa1.41□□□□□ -2.18
HMGB1P49-201ENST00000418882 MORN4Q8NDC4 146 aa1.41□□□□□ -2.18
HMGB1P49-201ENST00000418882 OR8B3Q8NGG8 313 aa1.41□□□□□ -2.18
HMGB1P49-201ENST00000418882 OR5H6Q8NGV6 325 aa1.41□□□□□ -2.18
HMGB1P49-201ENST00000418882 OR4C6Q8NH72 309 aa1.41□□□□□ -2.18
HMGB1P49-201ENST00000418882 CHCHD1Q96BP2 118 aaKnown RBP1.41□□□□□ -2.18
HMGB1P49-201ENST00000418882 LPAR5Q9H1C0 372 aa1.41□□□□□ -2.18
HMGB1P49-201ENST00000418882 CXCL16Q9H2A7 254 aa1.41□□□□□ -2.18
HMGB1P49-201ENST00000418882 SPANXCQ9NY87 97 aa1.41□□□□□ -2.18
HMGB1P49-201ENST00000418882 FKBP11Q9NYL4 201 aa1.41□□□□□ -2.18
HMGB1P49-201ENST00000418882 ERG28Q9UKR5 140 aa1.41□□□□□ -2.18
HMGB1P49-201ENST00000418882 A2ML1A8K2U0 1454 aa1.41□□□□□ -2.18
HMGB1P49-201ENST00000418882 C1orf167Q5SNV9 1468 aa1.41□□□□□ -2.18
HMGB1P49-201ENST00000418882 LTN1O94822 1766 aa1.41□□□□□ -2.18
HMGB1P49-201ENST00000418882 ANKRD36CQ5JPF3 1778 aa1.41□□□□□ -2.18
HMGB1P49-201ENST00000418882 ARFGEF2Q9Y6D5 1785 aa1.41□□□□□ -2.18
HMGB1P49-201ENST00000418882 CPAMD8Q8IZJ3 1885 aa1.41□□□□□ -2.18
HMGB1P49-201ENST00000418882 DSPPQ9NZW4 1301 aa1.4□□□□□ -2.18
HMGB1P49-201ENST00000418882 NFAT5O94916 1531 aa1.4□□□□□ -2.18
HMGB1P49-201ENST00000418882 TJP1Q07157 1748 aa1.4□□□□□ -2.18
HMGB1P49-201ENST00000418882 CDK5RAP2Q96SN8 1893 aa1.4□□□□□ -2.19
HMGB1P49-201ENST00000418882 A0A1B0GUL6 1792 aa1.4□□□□□ -2.19
HMGB1P49-201ENST00000418882 RREB1Q92766 1687 aa1.4□□□□□ -2.19
HMGB1P49-201ENST00000418882 A0A0D9SFI3 127 aa1.4□□□□□ -2.19
HMGB1P49-201ENST00000418882 A8MWV9 139 aa1.4□□□□□ -2.19
HMGB1P49-201ENST00000418882 MT-ND6P03923 174 aa1.4□□□□□ -2.19
HMGB1P49-201ENST00000418882 METTL15P1P0C7V9 234 aa1.4□□□□□ -2.19
HMGB1P49-201ENST00000418882 EVI2AP22794 236 aa1.4□□□□□ -2.19
HMGB1P49-201ENST00000418882 SSR2P43308 183 aa1.4□□□□□ -2.19
HMGB1P49-201ENST00000418882 NDUFA6P56556 154 aa1.4□□□□□ -2.19
HMGB1P49-201ENST00000418882 CDK5R1Q15078 307 aa1.4□□□□□ -2.19
HMGB1P49-201ENST00000418882 RPL13AP3Q6NVV1 102 aa1.4□□□□□ -2.19
HMGB1P49-201ENST00000418882 Q6ZTI0 123 aa1.4□□□□□ -2.19
HMGB1P49-201ENST00000418882 FAM216BQ8N7L0 139 aa1.4□□□□□ -2.19
HMGB1P49-201ENST00000418882 POP5Q969H6 163 aaKnown RBP1.4□□□□□ -2.19
HMGB1P49-201ENST00000418882 PRELID3AQ96N28 172 aa1.4□□□□□ -2.19
HMGB1P49-201ENST00000418882 SLC50A1Q9BRV3 221 aa1.4□□□□□ -2.19
HMGB1P49-201ENST00000418882 NDUFB11Q9NX14 153 aa1.4□□□□□ -2.19
HMGB1P49-201ENST00000418882 TAS2R4Q9NYW5 299 aa1.4□□□□□ -2.19
HMGB1P49-201ENST00000418882 NUP188Q5SRE5 1749 aa1.4□□□□□ -2.19
HMGB1P49-201ENST00000418882 PKD1L3Q7Z443 1732 aa1.4□□□□□ -2.19
HMGB1P49-201ENST00000418882 LRP6O75581 1613 aa1.4□□□□□ -2.19
HMGB1P49-201ENST00000418882 DISP2A7MBM2 1401 aa1.4□□□□□ -2.19
HMGB1P49-201ENST00000418882 ZNF609O15014 1411 aa1.4□□□□□ -2.19
HMGB1P49-201ENST00000418882 SCN8AQ9UQD0 1980 aa1.39□□□□□ -2.19
HMGB1P49-201ENST00000418882 OBSL1O75147 1896 aa1.39□□□□□ -2.19
HMGB1P49-201ENST00000418882 NUP210LQ5VU65 1888 aa1.39□□□□□ -2.19
HMGB1P49-201ENST00000418882 TANC1Q9C0D5 1861 aa1.39□□□□□ -2.19
HMGB1P49-201ENST00000418882 RGPD5Q99666 1765 aa1.39□□□□□ -2.19
HMGB1P49-201ENST00000418882 C5P01031 1676 aa1.39□□□□□ -2.19
HMGB1P49-201ENST00000418882 DIP2CQ9Y2E4 1556 aa1.39□□□□□ -2.19
HMGB1P49-201ENST00000418882 FAM236AA0A1B0GUQ0 79 aa1.39□□□□□ -2.19
HMGB1P49-201ENST00000418882 FAM236BA0A1B0GV22 79 aa1.39□□□□□ -2.19
HMGB1P49-201ENST00000418882 GNG7O60262 68 aa1.39□□□□□ -2.19
HMGB1P49-201ENST00000418882 TSPAN19P0C672 248 aa1.39□□□□□ -2.19
HMGB1P49-201ENST00000418882 ZNF705BP0CI00 300 aaPredicted RBP1.39□□□□□ -2.19
HMGB1P49-201ENST00000418882 ZNF93P35789 620 aaPredicted RBP1.39□□□□□ -2.19
HMGB1P49-201ENST00000418882 RPL26P61254 145 aaKnown RBP1.39□□□□□ -2.19
HMGB1P49-201ENST00000418882 GNGT1P63211 74 aa1.39□□□□□ -2.19
HMGB1P49-201ENST00000418882 OR5A2Q8NGI9 324 aa1.39□□□□□ -2.19
HMGB1P49-201ENST00000418882 OR5D16Q8NGK9 328 aa1.39□□□□□ -2.19
HMGB1P49-201ENST00000418882 CCL4L1Q8NHW4 92 aa1.39□□□□□ -2.19
HMGB1P49-201ENST00000418882 TP53RKQ96S44 253 aa1.39□□□□□ -2.19
HMGB1P49-201ENST00000418882 RPL26L1Q9UNX3 145 aaKnown RBP1.39□□□□□ -2.19
HMGB1P49-201ENST00000418882 TIAM2Q8IVF5 1701 aa1.39□□□□□ -2.19
HMGB1P49-201ENST00000418882 ARAP2Q8WZ64 1704 aa1.39□□□□□ -2.19
HMGB1P49-201ENST00000418882 EML6Q6ZMW3 1958 aa1.39□□□□□ -2.19
HMGB1P49-201ENST00000418882 UBR2Q8IWV8 1755 aa1.39□□□□□ -2.19
HMGB1P49-201ENST00000418882 KIAA2026Q5HYC2 2103 aa1.39□□□□□ -2.19
HMGB1P49-201ENST00000418882 ALS2Q96Q42 1657 aa1.39□□□□□ -2.19
HMGB1P49-201ENST00000418882 NUP98P52948 1817 aa1.38□□□□□ -2.19
HMGB1P49-201ENST00000418882 KIAA1551Q9HCM1 1747 aa1.38□□□□□ -2.19
HMGB1P49-201ENST00000418882 NUP210Q8TEM1 1887 aaPredicted RBP1.38□□□□□ -2.19
HMGB1P49-201ENST00000418882 TENM1Q9UKZ4 2725 aa1.38□□□□□ -2.19
HMGB1P49-201ENST00000418882 M0R2Z0 102 aa1.38□□□□□ -2.19
HMGB1P49-201ENST00000418882 MIFP14174 115 aa1.38□□□□□ -2.19
HMGB1P49-201ENST00000418882 AKR1D1P51857 326 aa1.38□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms