RNA–Protein interactions for RNA: ENST00000417702.5

NUP50-204, Transcript of nucleoporin 50, humanhuman

TSL 4

Gene NUP50, Length 584 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-204ENST00000417702 ANXA2RQ3ZCQ2 193 aa10.77□□□□□ -0.69
NUP50-204ENST00000417702 AKR1C8PQ5T2L2 129 aa10.77□□□□□ -0.69
NUP50-204ENST00000417702 TMUB2Q71RG4 321 aa10.77□□□□□ -0.69
NUP50-204ENST00000417702 LINC00612Q8N6U2 182 aa10.77□□□□□ -0.69
NUP50-204ENST00000417702 CMTM2Q8TAZ6 248 aa10.77□□□□□ -0.69
NUP50-204ENST00000417702 RAB24Q969Q5 203 aa10.77□□□□□ -0.69
NUP50-204ENST00000417702 HYLS1Q96M11 299 aa10.77□□□□□ -0.69
NUP50-204ENST00000417702 ATG101Q9BSB4 218 aa10.77□□□□□ -0.69
NUP50-204ENST00000417702 ZNF471Q9BX82 626 aaPredicted RBP10.77□□□□□ -0.69
NUP50-204ENST00000417702 OTORQ9NRC9 128 aa10.77□□□□□ -0.69
NUP50-204ENST00000417702 DIRC3C9JPN6 131 aa10.76□□□□□ -0.69
NUP50-204ENST00000417702 M0R2N4 97 aa10.76□□□□□ -0.69
NUP50-204ENST00000417702 HMGB3O15347 200 aaKnown RBP10.76□□□□□ -0.69
NUP50-204ENST00000417702 OR5I1Q13606 314 aa10.76□□□□□ -0.69
NUP50-204ENST00000417702 Q8TAT8 98 aa10.76□□□□□ -0.69
NUP50-204ENST00000417702 GSN-AS1Q9NRJ2 163 aa10.76□□□□□ -0.69
NUP50-204ENST00000417702 PGPA6NDG6 321 aa10.75□□□□□ -0.69
NUP50-204ENST00000417702 FAM3BP58499 235 aaPredicted RBP10.75□□□□□ -0.69
NUP50-204ENST00000417702 LGALS9BQ3B8N2 356 aa10.75□□□□□ -0.69
NUP50-204ENST00000417702 IGLV2-18A0A075B6J9 118 aa10.74□□□□□ -0.69
NUP50-204ENST00000417702 TRGV2A0A075B6R0 118 aa10.74□□□□□ -0.69
NUP50-204ENST00000417702 IGHV1OR15-1A0A075B7D0 117 aa10.74□□□□□ -0.69
NUP50-204ENST00000417702 CTXND1A0A1B0GTU2 59 aa10.74□□□□□ -0.69
NUP50-204ENST00000417702 CXorf1O96002 111 aa10.74□□□□□ -0.69
NUP50-204ENST00000417702 SEC11BP0C7V7 166 aa10.74□□□□□ -0.69
NUP50-204ENST00000417702 ARL14EPLP0DKL9 152 aa10.74□□□□□ -0.69
NUP50-204ENST00000417702 PRR9Q5T870 116 aa10.74□□□□□ -0.69
NUP50-204ENST00000417702 Q6ZTI0 123 aa10.74□□□□□ -0.69
NUP50-204ENST00000417702 LINC00336Q6ZUF6 198 aa10.74□□□□□ -0.69
NUP50-204ENST00000417702 C11orf72Q8NBR9 251 aa10.74□□□□□ -0.69
NUP50-204ENST00000417702 RPH3ALQ9UNE2 315 aa10.74□□□□□ -0.69
NUP50-204ENST00000417702 LENEPQ9Y5L5 61 aa10.74□□□□□ -0.69
NUP50-204ENST00000417702 TRGV1A0A0A0MS02 117 aa10.73□□□□□ -0.69
NUP50-204ENST00000417702 A0A1B0GVG6 124 aa10.73□□□□□ -0.69
NUP50-204ENST00000417702 TPT1P13693 172 aaKnown RBP10.73□□□□□ -0.69
NUP50-204ENST00000417702 CCL18P55774 89 aa10.73□□□□□ -0.69
NUP50-204ENST00000417702 TCL1AP56279 114 aa10.73□□□□□ -0.69
NUP50-204ENST00000417702 LGALSLQ3ZCW2 172 aaPredicted RBP10.73□□□□□ -0.69
NUP50-204ENST00000417702 IBA57Q5T440 356 aaKnown RBP10.73□□□□□ -0.69
NUP50-204ENST00000417702 ARL6IP6Q8N6S5 226 aa10.73□□□□□ -0.69
NUP50-204ENST00000417702 TMED6Q8WW62 240 aa10.73□□□□□ -0.69
NUP50-204ENST00000417702 TMEM167BQ9NRX6 74 aa10.73□□□□□ -0.69
NUP50-204ENST00000417702 TRAV26-1A0A087WT03 109 aa10.72□□□□□ -0.69
NUP50-204ENST00000417702 GCHFRP30047 84 aa10.72□□□□□ -0.69
NUP50-204ENST00000417702 GOLT1AQ6ZVE7 132 aa10.72□□□□□ -0.69
NUP50-204ENST00000417702 TMPRSS5Q9H3S3 457 aa10.72□□□□□ -0.69
NUP50-204ENST00000417702 KLF12Q9Y4X4 402 aa10.72□□□□□ -0.69
NUP50-204ENST00000417702 DNAH6Q9C0G6 4158 aa10.72□□□□□ -0.69
NUP50-204ENST00000417702 A0A0J9YY99 117 aa10.71□□□□□ -0.69
NUP50-204ENST00000417702 UMAD1C9J7I0 102 aa10.71□□□□□ -0.69
NUP50-204ENST00000417702 ZNF726P1Q15940 193 aa10.71□□□□□ -0.69
NUP50-204ENST00000417702 ZFP69Q49AA0 526 aa10.71□□□□□ -0.69
NUP50-204ENST00000417702 Q6ZQT7 251 aa10.71□□□□□ -0.69
NUP50-204ENST00000417702 SSX7Q7RTT5 188 aa10.71□□□□□ -0.69
NUP50-204ENST00000417702 IQCF2Q8IXL9 164 aa10.71□□□□□ -0.69
NUP50-204ENST00000417702 STOML3Q8TAV4 291 aa10.71□□□□□ -0.69
NUP50-204ENST00000417702 SUN5Q8TC36 379 aa10.71□□□□□ -0.69
NUP50-204ENST00000417702 C18orf15Q96N68 181 aa10.71□□□□□ -0.69
NUP50-204ENST00000417702 TP53TG3Q9ULZ0 132 aa10.71□□□□□ -0.69
NUP50-204ENST00000417702 NACAE9PAV3 2078 aa10.7□□□□□ -0.7
NUP50-204ENST00000417702 SPINK4O60575 86 aa10.7□□□□□ -0.7
NUP50-204ENST00000417702 HOXA5P20719 270 aa10.7□□□□□ -0.7
NUP50-204ENST00000417702 ZNF415Q09FC8 603 aa10.7□□□□□ -0.7
NUP50-204ENST00000417702 MUC21Q5SSG8 566 aa10.7□□□□□ -0.7
NUP50-204ENST00000417702 Q6AWC8 147 aa10.7□□□□□ -0.7
NUP50-204ENST00000417702 EIF5AL1Q6IS14 154 aaKnown RBP10.7□□□□□ -0.7
NUP50-204ENST00000417702 Q6ZR54 194 aa10.7□□□□□ -0.7
NUP50-204ENST00000417702 MUC4Q99102 2169 aa10.69□□□□□ -0.7
NUP50-204ENST00000417702 SERTM2A0A1B0GWG4 89 aa10.69□□□□□ -0.7
NUP50-204ENST00000417702 MAP1LC3B2A6NCE7 125 aa10.69□□□□□ -0.7
NUP50-204ENST00000417702 H3BNG1 76 aa10.69□□□□□ -0.7
NUP50-204ENST00000417702 SOHLH1Q5JUK2 328 aa10.69□□□□□ -0.7
NUP50-204ENST00000417702 FAM159AQ6UWV7 190 aa10.69□□□□□ -0.7
NUP50-204ENST00000417702 DPPA3Q6W0C5 159 aa10.69□□□□□ -0.7
NUP50-204ENST00000417702 SLC51BQ86UW2 128 aa10.69□□□□□ -0.7
NUP50-204ENST00000417702 MAP1LC3BQ9GZQ8 125 aa10.69□□□□□ -0.7
NUP50-204ENST00000417702 DNAH10Q8IVF4 4471 aa10.68□□□□□ -0.7
NUP50-204ENST00000417702 TRGV11A0A075B6L2 103 aa10.68□□□□□ -0.7
NUP50-204ENST00000417702 K7EQM0 130 aa10.68□□□□□ -0.7
NUP50-204ENST00000417702 GNG5P63218 68 aa10.68□□□□□ -0.7
NUP50-204ENST00000417702 C5orf17Q8NAS9 161 aa10.68□□□□□ -0.7
NUP50-204ENST00000417702 NDFIP1Q9BT67 221 aa10.68□□□□□ -0.7
NUP50-204ENST00000417702 TREM1Q9NP99 234 aa10.68□□□□□ -0.7
NUP50-204ENST00000417702 MRPL16Q9NX20 251 aaKnown RBP10.68□□□□□ -0.7
NUP50-204ENST00000417702 NAGKQ9UJ70 344 aa10.68□□□□□ -0.7
NUP50-204ENST00000417702 LINC00588Q9Y4M8 146 aa10.68□□□□□ -0.7
NUP50-204ENST00000417702 TRAV8-1A0A0A6YYK1 113 aa10.67□□□□□ -0.7
NUP50-204ENST00000417702 A0A1W2PRE2 83 aa10.67□□□□□ -0.7
NUP50-204ENST00000417702 PRSS29PA6NIE9 313 aa10.67□□□□□ -0.7
NUP50-204ENST00000417702 RTL8CO15255 209 aa10.67□□□□□ -0.7
NUP50-204ENST00000417702 FHITP49789 147 aa10.67□□□□□ -0.7
NUP50-204ENST00000417702 FGF8P55075 233 aaPredicted RBP10.67□□□□□ -0.7
NUP50-204ENST00000417702 TMEM183BQ1AE95 376 aa10.67□□□□□ -0.7
NUP50-204ENST00000417702 TMEM183AQ8IXX5 376 aa10.67□□□□□ -0.7
NUP50-204ENST00000417702 C9orf62Q8N4C0 152 aa10.67□□□□□ -0.7
NUP50-204ENST00000417702 ZNRF2Q8NHG8 242 aa10.67□□□□□ -0.7
NUP50-204ENST00000417702 FAM213BQ8TBF2 198 aa10.67□□□□□ -0.7
NUP50-204ENST00000417702 FRAS1Q86XX4 4008 aa10.66□□□□□ -0.7
NUP50-204ENST00000417702 TRAV21A0A0B4J279 112 aa10.66□□□□□ -0.7
NUP50-204ENST00000417702 SUMO1P63165 101 aaKnown RBP10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms