RNA–Protein interactions for RNA: ENST00000417448.1

VCP-202, Transcript of valosin containing protein, humanhuman

TSL 3

Gene VCP, Length 722 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-202ENST00000417448 DEFB131BA0A096LNP1 70 aa12.75□□□□□ -0.37
VCP-202ENST00000417448 TRAV12-3A0A0B4J271 114 aa12.75□□□□□ -0.37
VCP-202ENST00000417448 AZU1P20160 251 aa12.75□□□□□ -0.37
VCP-202ENST00000417448 SUMO1P63165 101 aaKnown RBP12.75□□□□□ -0.37
VCP-202ENST00000417448 C12orf74Q32Q52 190 aa12.75□□□□□ -0.37
VCP-202ENST00000417448 PRR9Q5T870 116 aa12.75□□□□□ -0.37
VCP-202ENST00000417448 C9orf47Q6ZRZ4 202 aa12.75□□□□□ -0.37
VCP-202ENST00000417448 GOLT1AQ6ZVE7 132 aa12.75□□□□□ -0.37
VCP-202ENST00000417448 LINC00477Q96M19 166 aa12.75□□□□□ -0.37
VCP-202ENST00000417448 LINC01587Q99440 93 aa12.75□□□□□ -0.37
VCP-202ENST00000417448 TRAV8-1A0A0A6YYK1 113 aa12.74□□□□□ -0.37
VCP-202ENST00000417448 RNASE4P34096 147 aaKnown RBP12.74□□□□□ -0.37
VCP-202ENST00000417448 LEPP41159 167 aa12.74□□□□□ -0.37
VCP-202ENST00000417448 BTN1A1Q13410 526 aa12.74□□□□□ -0.37
VCP-202ENST00000417448 TMEM78Q5T7P6 136 aa12.74□□□□□ -0.37
VCP-202ENST00000417448 STOML3Q8TAV4 291 aa12.74□□□□□ -0.37
VCP-202ENST00000417448 CMTM2Q8TAZ6 248 aa12.74□□□□□ -0.37
VCP-202ENST00000417448 NDUFAF3Q9BU61 184 aa12.74□□□□□ -0.37
VCP-202ENST00000417448 TMEM167BQ9NRX6 74 aa12.74□□□□□ -0.37
VCP-202ENST00000417448 GGTLC3B5MD39 225 aa12.73□□□□□ -0.37
VCP-202ENST00000417448 TSPOP30536 169 aa12.73□□□□□ -0.37
VCP-202ENST00000417448 EIF5AP63241 154 aaKnown RBP12.73□□□□□ -0.37
VCP-202ENST00000417448 SFT2D1Q8WV19 159 aa12.73□□□□□ -0.37
VCP-202ENST00000417448 FAM19A4Q96LR4 140 aa12.73□□□□□ -0.37
VCP-202ENST00000417448 SCRT2Q9NQ03 307 aa12.73□□□□□ -0.37
VCP-202ENST00000417448 LOC102723971A0A1B0GUV8 181 aa12.72□□□□□ -0.37
VCP-202ENST00000417448 HBE1P02100 147 aa12.72□□□□□ -0.37
VCP-202ENST00000417448 ZNF138P52744 262 aa12.72□□□□□ -0.37
VCP-202ENST00000417448 FAM74A1Q5RGS3 127 aa12.72□□□□□ -0.37
VCP-202ENST00000417448 RXFP4Q8TDU9 374 aa12.72□□□□□ -0.37
VCP-202ENST00000417448 NEU1Q99519 415 aa12.72□□□□□ -0.37
VCP-202ENST00000417448 ZNF492Q9P255 531 aa12.72□□□□□ -0.37
VCP-202ENST00000417448 TNP2Q05952 138 aa12.71□□□□□ -0.37
VCP-202ENST00000417448 RRN3P1Q2M238 152 aa12.71□□□□□ -0.37
VCP-202ENST00000417448 SOHLH1Q5JUK2 328 aa12.71□□□□□ -0.37
VCP-202ENST00000417448 SLC51BQ86UW2 128 aa12.71□□□□□ -0.37
VCP-202ENST00000417448 ZFAND2AQ8N6M9 145 aa12.71□□□□□ -0.37
VCP-202ENST00000417448 UMAD1C9J7I0 102 aa12.7□□□□□ -0.38
VCP-202ENST00000417448 GPX1P07203 203 aa12.7□□□□□ -0.38
VCP-202ENST00000417448 CCL20P78556 96 aa12.7□□□□□ -0.38
VCP-202ENST00000417448 C1orf134Q5TEV5 83 aa12.7□□□□□ -0.38
VCP-202ENST00000417448 MBD3L1Q8WWY6 194 aa12.7□□□□□ -0.38
VCP-202ENST00000417448 TVP23CQ96ET8 276 aa12.7□□□□□ -0.38
VCP-202ENST00000417448 LINC00479Q96M42 142 aa12.7□□□□□ -0.38
VCP-202ENST00000417448 ODF3Q96PU9 254 aa12.7□□□□□ -0.38
VCP-202ENST00000417448 C7orf71A4D174 169 aa12.69□□□□□ -0.38
VCP-202ENST00000417448 RBAKDNA6NC62 111 aa12.69□□□□□ -0.38
VCP-202ENST00000417448 SMIM9A6NGZ8 99 aa12.69□□□□□ -0.38
VCP-202ENST00000417448 FAM74A7A6NL05 159 aa12.69□□□□□ -0.38
VCP-202ENST00000417448 H2AFB1P0C5Y9 115 aa12.69□□□□□ -0.38
VCP-202ENST00000417448 EPDR1Q9UM22 224 aa12.69□□□□□ -0.38
VCP-202ENST00000417448 TRAV34A0A0B4J273 112 aa12.68□□□□□ -0.38
VCP-202ENST00000417448 A0A1W2PRE2 83 aa12.68□□□□□ -0.38
VCP-202ENST00000417448 KLLNB2CW77 178 aa12.68□□□□□ -0.38
VCP-202ENST00000417448 IFNA7P01567 189 aa12.68□□□□□ -0.38
VCP-202ENST00000417448 TCRAP04437 139 aa12.68□□□□□ -0.38
VCP-202ENST00000417448 CRISP2P16562 243 aa12.68□□□□□ -0.38
VCP-202ENST00000417448 UBE2DNLQ8IWF7 75 aa12.68□□□□□ -0.38
VCP-202ENST00000417448 C5orf17Q8NAS9 161 aa12.68□□□□□ -0.38
VCP-202ENST00000417448 F6UZH7 168 aa12.67□□□□□ -0.38
VCP-202ENST00000417448 PAGE4O60829 102 aa12.67□□□□□ -0.38
VCP-202ENST00000417448 ZNF324O75467 553 aaPredicted RBP12.67□□□□□ -0.38
VCP-202ENST00000417448 ATP5G3P48201 142 aa12.67□□□□□ -0.38
VCP-202ENST00000417448 SULT1A2P50226 295 aa12.67□□□□□ -0.38
VCP-202ENST00000417448 FAM222AQ5U5X8 452 aa12.67□□□□□ -0.38
VCP-202ENST00000417448 CST9LP1Q5W188 147 aa12.67□□□□□ -0.38
VCP-202ENST00000417448 PLAC8L1A1L4L8 177 aa12.66□□□□□ -0.38
VCP-202ENST00000417448 H7BYZ3 331 aa12.66□□□□□ -0.38
VCP-202ENST00000417448 TAS2R60P59551 318 aa12.66□□□□□ -0.38
VCP-202ENST00000417448 ALKAL2Q6UX46 152 aa12.66□□□□□ -0.38
VCP-202ENST00000417448 DPPA3Q6W0C5 159 aa12.66□□□□□ -0.38
VCP-202ENST00000417448 PRNTQ86SH4 94 aa12.66□□□□□ -0.38
VCP-202ENST00000417448 TMEM256Q8N2U0 113 aa12.66□□□□□ -0.38
VCP-202ENST00000417448 C8orf49Q96NF6 230 aa12.66□□□□□ -0.38
VCP-202ENST00000417448 NIPSNAP3BQ9BS92 247 aa12.66□□□□□ -0.38
VCP-202ENST00000417448 TP53TG3Q9ULZ0 132 aa12.66□□□□□ -0.38
VCP-202ENST00000417448 IGLV2-11P01706 119 aa12.65□□□□□ -0.38
VCP-202ENST00000417448 MUC21Q5SSG8 566 aa12.65□□□□□ -0.38
VCP-202ENST00000417448 DKK2Q9UBU2 259 aa12.65□□□□□ -0.38
VCP-202ENST00000417448 PSG8Q9UQ74 426 aa12.65□□□□□ -0.38
VCP-202ENST00000417448 EIF5AL1Q6IS14 154 aaKnown RBP12.64□□□□□ -0.39
VCP-202ENST00000417448 TREM1Q9NP99 234 aa12.64□□□□□ -0.39
VCP-202ENST00000417448 MYCBP2O75592 4640 aa12.64□□□□□ -0.39
VCP-202ENST00000417448 PEX7O00628 323 aa12.63□□□□□ -0.39
VCP-202ENST00000417448 SPART-AS1P0CW21 52 aa12.63□□□□□ -0.39
VCP-202ENST00000417448 CCDC28AQ8IWP9 274 aa12.63□□□□□ -0.39
VCP-202ENST00000417448 CYB561D1Q8N8Q1 229 aa12.63□□□□□ -0.39
VCP-202ENST00000417448 C20orf144Q9BQM9 153 aa12.63□□□□□ -0.39
VCP-202ENST00000417448 ATG101Q9BSB4 218 aa12.63□□□□□ -0.39
VCP-202ENST00000417448 TMEM189A5PLL7 270 aa12.62□□□□□ -0.39
VCP-202ENST00000417448 NMBP08949 121 aa12.62□□□□□ -0.39
VCP-202ENST00000417448 ZNF80P51504 273 aaPredicted RBP12.62□□□□□ -0.39
VCP-202ENST00000417448 FLI1Q01543 452 aaPredicted RBP12.62□□□□□ -0.39
VCP-202ENST00000417448 ARL6IP6Q8N6S5 226 aa12.62□□□□□ -0.39
VCP-202ENST00000417448 RNASE8Q8TDE3 154 aaKnown RBP12.62□□□□□ -0.39
VCP-202ENST00000417448 NOP10Q9NPE3 64 aaKnown RBP12.62□□□□□ -0.39
VCP-202ENST00000417448 GNG13Q9P2W3 67 aa12.62□□□□□ -0.39
VCP-202ENST00000417448 CBY3A6NI87 242 aa12.61□□□□□ -0.39
VCP-202ENST00000417448 RGS13O14921 159 aa12.61□□□□□ -0.39
VCP-202ENST00000417448 DEFB130BP0DP73 79 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms