RNA–Protein interactions for RNA: ENST00000416769.2

LINC00339-202, long intergenic non-protein coding RNA 339, humanhuman

TSL 1 (best) BASIC

Gene LINC00339, Length 1,077 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-202ENST00000416769 CST9LP1Q5W188 147 aa9.13□□□□□ -0.95
LINC00339-202ENST00000416769 EBLN2Q6P2I7 272 aa9.13□□□□□ -0.95
LINC00339-202ENST00000416769 C5orf17Q8NAS9 161 aa9.13□□□□□ -0.95
LINC00339-202ENST00000416769 CMTM2Q8TAZ6 248 aa9.13□□□□□ -0.95
LINC00339-202ENST00000416769 SLC35B3Q9H1N7 401 aa9.13□□□□□ -0.95
LINC00339-202ENST00000416769 SAV1Q9H4B6 383 aaPredicted RBP9.13□□□□□ -0.95
LINC00339-202ENST00000416769 DKK2Q9UBU2 259 aa9.13□□□□□ -0.95
LINC00339-202ENST00000416769 EPDR1Q9UM22 224 aa9.13□□□□□ -0.95
LINC00339-202ENST00000416769 HLA-DRB4X5D2U9 266 aa9.13□□□□□ -0.95
LINC00339-202ENST00000416769 A0A0J9YX75 114 aa9.12□□□□□ -0.95
LINC00339-202ENST00000416769 RBFOX3A6NFN3 312 aa9.12□□□□□ -0.95
LINC00339-202ENST00000416769 GGTLC3B5MD39 225 aa9.12□□□□□ -0.95
LINC00339-202ENST00000416769 DIRC3C9JPN6 131 aa9.12□□□□□ -0.95
LINC00339-202ENST00000416769 PRAC2D3DTV9 90 aa9.12□□□□□ -0.95
LINC00339-202ENST00000416769 DUSP14O95147 198 aaKnown RBP9.12□□□□□ -0.95
LINC00339-202ENST00000416769 SPART-AS1P0CW21 52 aa9.12□□□□□ -0.95
LINC00339-202ENST00000416769 TMEM88Q6PEY1 159 aa9.12□□□□□ -0.95
LINC00339-202ENST00000416769 OR8A1Q8NGG7 326 aa9.12□□□□□ -0.95
LINC00339-202ENST00000416769 TCEAL7Q9BRU2 100 aa9.12□□□□□ -0.95
LINC00339-202ENST00000416769 VAX2Q9UIW0 290 aa9.12□□□□□ -0.95
LINC00339-202ENST00000416769 SERTM2A0A1B0GWG4 89 aa9.11□□□□□ -0.95
LINC00339-202ENST00000416769 RBAKDNA6NC62 111 aa9.11□□□□□ -0.95
LINC00339-202ENST00000416769 F6UZH7 168 aa9.11□□□□□ -0.95
LINC00339-202ENST00000416769 NDUFS6O75380 124 aaKnown RBP9.11□□□□□ -0.95
LINC00339-202ENST00000416769 BCL2P10415 239 aa9.11□□□□□ -0.95
LINC00339-202ENST00000416769 ATP5G3P48201 142 aa9.11□□□□□ -0.95
LINC00339-202ENST00000416769 C1orf158Q8N1D5 194 aa9.11□□□□□ -0.95
LINC00339-202ENST00000416769 OR10J6PQ8NGY7 276 aa9.11□□□□□ -0.95
LINC00339-202ENST00000416769 HIST1H2BAQ96A08 127 aa9.11□□□□□ -0.95
LINC00339-202ENST00000416769 LINC00477Q96M19 166 aa9.11□□□□□ -0.95
LINC00339-202ENST00000416769 FAM210AQ96ND0 272 aa9.11□□□□□ -0.95
LINC00339-202ENST00000416769 CLUHP3Q96NS8 147 aa9.11□□□□□ -0.95
LINC00339-202ENST00000416769 LOC102723971A0A1B0GUV8 181 aa9.1□□□□□ -0.95
LINC00339-202ENST00000416769 LCE2BO14633 110 aa9.1□□□□□ -0.95
LINC00339-202ENST00000416769 TCRAP04437 139 aa9.1□□□□□ -0.95
LINC00339-202ENST00000416769 MEF2BQ02080 365 aaPredicted RBP9.1□□□□□ -0.95
LINC00339-202ENST00000416769 ZNF506Q5JVG8 444 aa9.1□□□□□ -0.95
LINC00339-202ENST00000416769 C1orf134Q5TEV5 83 aa9.1□□□□□ -0.95
LINC00339-202ENST00000416769 C9orf47Q6ZRZ4 202 aa9.1□□□□□ -0.95
LINC00339-202ENST00000416769 NEU1Q99519 415 aa9.1□□□□□ -0.95
LINC00339-202ENST00000416769 NIPSNAP3BQ9BS92 247 aa9.1□□□□□ -0.95
LINC00339-202ENST00000416769 C1QTNF4Q9BXJ3 329 aa9.1□□□□□ -0.95
LINC00339-202ENST00000416769 PPP1R14DQ9NXH3 145 aa9.1□□□□□ -0.95
LINC00339-202ENST00000416769 FBLL1A6NHQ2 334 aaKnown RBP9.09□□□□□ -0.95
LINC00339-202ENST00000416769 A8MTW9 85 aa9.09□□□□□ -0.95
LINC00339-202ENST00000416769 C16orf90A8MZG2 172 aa9.09□□□□□ -0.95
LINC00339-202ENST00000416769 K7EQM0 130 aa9.09□□□□□ -0.95
LINC00339-202ENST00000416769 GNG5P63218 68 aa9.09□□□□□ -0.95
LINC00339-202ENST00000416769 OR4B1Q8NGF8 309 aa9.09□□□□□ -0.95
LINC00339-202ENST00000416769 ATG101Q9BSB4 218 aa9.09□□□□□ -0.95
LINC00339-202ENST00000416769 EIF5A2Q9GZV4 153 aaKnown RBP9.09□□□□□ -0.95
LINC00339-202ENST00000416769 AGPAT4-IT1Q9H0P7 198 aa9.09□□□□□ -0.95
LINC00339-202ENST00000416769 SMDT1Q9H4I9 107 aa9.09□□□□□ -0.95
LINC00339-202ENST00000416769 NPIPB6E9PJ23 425 aa9.08□□□□□ -0.96
LINC00339-202ENST00000416769 PEX7O00628 323 aa9.08□□□□□ -0.96
LINC00339-202ENST00000416769 PDE6DO43924 150 aa9.08□□□□□ -0.96
LINC00339-202ENST00000416769 PRB4P10163 310 aaPredicted RBP9.08□□□□□ -0.96
LINC00339-202ENST00000416769 CNN1P51911 297 aaKnown RBP9.08□□□□□ -0.96
LINC00339-202ENST00000416769 NUTF2P61970 127 aaKnown RBP9.08□□□□□ -0.96
LINC00339-202ENST00000416769 HIST1H1AQ02539 215 aaPredicted RBP9.08□□□□□ -0.96
LINC00339-202ENST00000416769 GOLT1AQ6ZVE7 132 aa9.08□□□□□ -0.96
LINC00339-202ENST00000416769 MAPKAPK5-AS1Q8N8E1 139 aa9.08□□□□□ -0.96
LINC00339-202ENST00000416769 CYB561D1Q8N8Q1 229 aa9.08□□□□□ -0.96
LINC00339-202ENST00000416769 VGLL1Q99990 258 aa9.08□□□□□ -0.96
LINC00339-202ENST00000416769 MED9Q9NWA0 146 aa9.08□□□□□ -0.96
LINC00339-202ENST00000416769 RPH3ALQ9UNE2 315 aa9.08□□□□□ -0.96
LINC00339-202ENST00000416769 DNAH5Q8TE73 4624 aa9.07□□□□□ -0.96
LINC00339-202ENST00000416769 HERC1Q15751 4861 aa9.07□□□□□ -0.96
LINC00339-202ENST00000416769 IGKV2-40A0A087WW87 121 aaPredicted RBP9.07□□□□□ -0.96
LINC00339-202ENST00000416769 RAB19A4D1S5 217 aa9.07□□□□□ -0.96
LINC00339-202ENST00000416769 IGKV2D-40P01614 121 aaPredicted RBP9.07□□□□□ -0.96
LINC00339-202ENST00000416769 S100A9P06702 114 aaKnown RBP9.07□□□□□ -0.96
LINC00339-202ENST00000416769 ERCC8Q13216 396 aa9.07□□□□□ -0.96
LINC00339-202ENST00000416769 PEA15Q15121 130 aa9.07□□□□□ -0.96
LINC00339-202ENST00000416769 C4orf48Q5BLP8 95 aa9.07□□□□□ -0.96
LINC00339-202ENST00000416769 TOR2AQ5JU69 321 aa9.07□□□□□ -0.96
LINC00339-202ENST00000416769 TMEM78Q5T7P6 136 aa9.07□□□□□ -0.96
LINC00339-202ENST00000416769 TMEM75Q8N9X5 138 aa9.07□□□□□ -0.96
LINC00339-202ENST00000416769 C11orf52Q96A22 123 aa9.07□□□□□ -0.96
LINC00339-202ENST00000416769 ODF3Q96PU9 254 aa9.07□□□□□ -0.96
LINC00339-202ENST00000416769 ZNF492Q9P255 531 aa9.07□□□□□ -0.96
LINC00339-202ENST00000416769 KLF12Q9Y4X4 402 aa9.07□□□□□ -0.96
LINC00339-202ENST00000416769 TRBV7-9A0A0J9YWB2 115 aa9.06□□□□□ -0.96
LINC00339-202ENST00000416769 CT45A10P0DMU9 189 aa9.06□□□□□ -0.96
LINC00339-202ENST00000416769 ZNF138P52744 262 aa9.06□□□□□ -0.96
LINC00339-202ENST00000416769 TMEM183BQ1AE95 376 aa9.06□□□□□ -0.96
LINC00339-202ENST00000416769 AMTNQ6UX39 209 aa9.06□□□□□ -0.96
LINC00339-202ENST00000416769 PSG8Q9UQ74 426 aa9.06□□□□□ -0.96
LINC00339-202ENST00000416769 LENEPQ9Y5L5 61 aa9.06□□□□□ -0.96
LINC00339-202ENST00000416769 TRBV6-1A0A0K0K1D8 114 aa9.05□□□□□ -0.96
LINC00339-202ENST00000416769 SCO2A0A1W2PP80 73 aa9.05□□□□□ -0.96
LINC00339-202ENST00000416769 TMEM189A5PLL7 270 aa9.05□□□□□ -0.96
LINC00339-202ENST00000416769 LINC00862A6NCI5 91 aa9.05□□□□□ -0.96
LINC00339-202ENST00000416769 SMIM9A6NGZ8 99 aa9.05□□□□□ -0.96
LINC00339-202ENST00000416769 ZNF705GA8MUZ8 300 aaPredicted RBP9.05□□□□□ -0.96
LINC00339-202ENST00000416769 TMEM250H0YL14 139 aa9.05□□□□□ -0.96
LINC00339-202ENST00000416769 IGLV2-11P01706 119 aa9.05□□□□□ -0.96
LINC00339-202ENST00000416769 SRP19P09132 144 aaKnown RBP9.05□□□□□ -0.96
LINC00339-202ENST00000416769 AKR1C3P42330 323 aa9.05□□□□□ -0.96
LINC00339-202ENST00000416769 TAS2R60P59551 318 aa9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms