RNA–Protein interactions for RNA: ENST00000416159.5

PDLIM2-208, Transcript of PDZ and LIM domain 2, humanhuman

TSL 5

Gene PDLIM2, Length 880 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-208ENST00000416159 SMIM3Q9BZL3 60 aa12.18□□□□□ -0.46
PDLIM2-208ENST00000416159 Q9H3A6 140 aa12.18□□□□□ -0.46
PDLIM2-208ENST00000416159 TP53TG3Q9ULZ0 132 aa12.18□□□□□ -0.46
PDLIM2-208ENST00000416159 MRPS16Q9Y3D3 137 aaKnown RBP12.18□□□□□ -0.46
PDLIM2-208ENST00000416159 MBD2Q9UBB5 411 aa12.17□□□□□ -0.46
PDLIM2-208ENST00000416159 A0A096LPF7 62 aa12.16□□□□□ -0.46
PDLIM2-208ENST00000416159 A0A1W2PPQ1 181 aa12.16□□□□□ -0.46
PDLIM2-208ENST00000416159 ZNF266Q14584 549 aa12.16□□□□□ -0.46
PDLIM2-208ENST00000416159 Q8TAT8 98 aa12.16□□□□□ -0.46
PDLIM2-208ENST00000416159 ST6GAL2Q96JF0 529 aa12.16□□□□□ -0.46
PDLIM2-208ENST00000416159 LENEPQ9Y5L5 61 aa12.16□□□□□ -0.46
PDLIM2-208ENST00000416159 PKD1P98161 4303 aa12.15□□□□□ -0.46
PDLIM2-208ENST00000416159 DIRC3C9JPN6 131 aa12.15□□□□□ -0.46
PDLIM2-208ENST00000416159 ZNF415Q09FC8 603 aa12.15□□□□□ -0.46
PDLIM2-208ENST00000416159 SLAQ13239 276 aa12.15□□□□□ -0.46
PDLIM2-208ENST00000416159 Q6ZQT7 251 aa12.15□□□□□ -0.46
PDLIM2-208ENST00000416159 PAX4O43316 350 aa12.14□□□□□ -0.47
PDLIM2-208ENST00000416159 BTF3P20290 206 aaKnown RBP12.14□□□□□ -0.47
PDLIM2-208ENST00000416159 ACOT6Q3I5F7 207 aaPredicted RBP12.14□□□□□ -0.47
PDLIM2-208ENST00000416159 OTORQ9NRC9 128 aa12.14□□□□□ -0.47
PDLIM2-208ENST00000416159 MRPL16Q9NX20 251 aaKnown RBP12.14□□□□□ -0.47
PDLIM2-208ENST00000416159 C16orf90A8MZG2 172 aa12.13□□□□□ -0.47
PDLIM2-208ENST00000416159 FAM74A1Q5RGS3 127 aa12.13□□□□□ -0.47
PDLIM2-208ENST00000416159 Q6AWC8 147 aa12.13□□□□□ -0.47
PDLIM2-208ENST00000416159 PQLC2Q6ZP29 291 aa12.13□□□□□ -0.47
PDLIM2-208ENST00000416159 TMED6Q8WW62 240 aa12.13□□□□□ -0.47
PDLIM2-208ENST00000416159 WFDC1Q9HC57 220 aa12.13□□□□□ -0.47
PDLIM2-208ENST00000416159 PRO0255Q9UI72 69 aa12.13□□□□□ -0.47
PDLIM2-208ENST00000416159 ICOSQ9Y6W8 199 aa12.13□□□□□ -0.47
PDLIM2-208ENST00000416159 A0A1W2PPV4 95 aa12.12□□□□□ -0.47
PDLIM2-208ENST00000416159 PGPA6NDG6 321 aa12.12□□□□□ -0.47
PDLIM2-208ENST00000416159 IGHV3-53P01767 116 aa12.12□□□□□ -0.47
PDLIM2-208ENST00000416159 MUC21Q5SSG8 566 aa12.12□□□□□ -0.47
PDLIM2-208ENST00000416159 ARL6IP6Q8N6S5 226 aa12.12□□□□□ -0.47
PDLIM2-208ENST00000416159 CMTM2Q8TAZ6 248 aa12.12□□□□□ -0.47
PDLIM2-208ENST00000416159 HYLS1Q96M11 299 aa12.12□□□□□ -0.47
PDLIM2-208ENST00000416159 SPXQ9BT56 116 aa12.12□□□□□ -0.47
PDLIM2-208ENST00000416159 KRTAP1-5Q9BYS1 174 aa12.12□□□□□ -0.47
PDLIM2-208ENST00000416159 FAM159AQ6UWV7 190 aa12.11□□□□□ -0.47
PDLIM2-208ENST00000416159 BATF3Q9NR55 127 aa12.11□□□□□ -0.47
PDLIM2-208ENST00000416159 HHLA3Q9XRX5 114 aa12.11□□□□□ -0.47
PDLIM2-208ENST00000416159 TRGV11A0A075B6L2 103 aa12.1□□□□□ -0.47
PDLIM2-208ENST00000416159 EIF3GO75821 320 aaKnown RBP eCLIP12.1□□□□□ -0.47
PDLIM2-208ENST00000416159 CRYBA4P53673 196 aa12.1□□□□□ -0.47
PDLIM2-208ENST00000416159 FHL2Q14192 279 aa12.1□□□□□ -0.47
PDLIM2-208ENST00000416159 MDFICQ9P1T7 246 aa12.1□□□□□ -0.47
PDLIM2-208ENST00000416159 SIVA1O15304 175 aa12.09□□□□□ -0.47
PDLIM2-208ENST00000416159 RAB2AP61019 212 aa12.09□□□□□ -0.47
PDLIM2-208ENST00000416159 MRPL23Q16540 153 aaKnown RBP12.09□□□□□ -0.47
PDLIM2-208ENST00000416159 TMEM183BQ1AE95 376 aa12.09□□□□□ -0.47
PDLIM2-208ENST00000416159 TMEM183AQ8IXX5 376 aa12.09□□□□□ -0.47
PDLIM2-208ENST00000416159 OR10G4Q8NGN3 311 aa12.09□□□□□ -0.47
PDLIM2-208ENST00000416159 OR10G9Q8NGN4 311 aa12.09□□□□□ -0.47
PDLIM2-208ENST00000416159 OR10G7Q8NGN6 311 aa12.09□□□□□ -0.47
PDLIM2-208ENST00000416159 C8orf49Q96NF6 230 aa12.09□□□□□ -0.47
PDLIM2-208ENST00000416159 RPH3ALQ9UNE2 315 aa12.09□□□□□ -0.47
PDLIM2-208ENST00000416159 ALG5Q9Y673 324 aa12.09□□□□□ -0.47
PDLIM2-208ENST00000416159 TRGV4A0A0C4DH28 118 aa12.08□□□□□ -0.48
PDLIM2-208ENST00000416159 GOLT1AQ6ZVE7 132 aa12.08□□□□□ -0.48
PDLIM2-208ENST00000416159 IQCF2Q8IXL9 164 aa12.08□□□□□ -0.48
PDLIM2-208ENST00000416159 RASL10AQ92737 203 aa12.08□□□□□ -0.48
PDLIM2-208ENST00000416159 RYR1P21817 5038 aa12.07□□□□□ -0.48
PDLIM2-208ENST00000416159 TDRG1Q3Y452 100 aa12.07□□□□□ -0.48
PDLIM2-208ENST00000416159 TRAV21A0A0B4J279 112 aa12.06□□□□□ -0.48
PDLIM2-208ENST00000416159 CDK2AP2O75956 126 aa12.06□□□□□ -0.48
PDLIM2-208ENST00000416159 NXPH4O95158 308 aa12.06□□□□□ -0.48
PDLIM2-208ENST00000416159 CDC34P49427 236 aaPredicted RBP12.06□□□□□ -0.48
PDLIM2-208ENST00000416159 LYPD5Q6UWN5 251 aa12.06□□□□□ -0.48
PDLIM2-208ENST00000416159 NEGR1Q7Z3B1 354 aa12.06□□□□□ -0.48
PDLIM2-208ENST00000416159 SPATA12Q7Z6I5 190 aa12.06□□□□□ -0.48
PDLIM2-208ENST00000416159 OR2G3Q8NGZ4 309 aa12.06□□□□□ -0.48
PDLIM2-208ENST00000416159 ZNF479Q96JC4 524 aa12.06□□□□□ -0.48
PDLIM2-208ENST00000416159 NAGKQ9UJ70 344 aa12.06□□□□□ -0.48
PDLIM2-208ENST00000416159 HMGB3O15347 200 aaKnown RBP12.05□□□□□ -0.48
PDLIM2-208ENST00000416159 SFTA3P0C7M3 94 aa12.05□□□□□ -0.48
PDLIM2-208ENST00000416159 MED28Q9H204 178 aa12.05□□□□□ -0.48
PDLIM2-208ENST00000416159 TREM1Q9NP99 234 aa12.05□□□□□ -0.48
PDLIM2-208ENST00000416159 PCLOQ9Y6V0 5065 aa12.05□□□□□ -0.48
PDLIM2-208ENST00000416159 SERTM2A0A1B0GWG4 89 aa12.04□□□□□ -0.48
PDLIM2-208ENST00000416159 M0R2P5 195 aa12.04□□□□□ -0.48
PDLIM2-208ENST00000416159 GNRH2O43555 120 aa12.04□□□□□ -0.48
PDLIM2-208ENST00000416159 PTTG1O95997 202 aa12.04□□□□□ -0.48
PDLIM2-208ENST00000416159 ORM1P02763 201 aa12.04□□□□□ -0.48
PDLIM2-208ENST00000416159 STAG3L2P0CL84 134 aa12.04□□□□□ -0.48
PDLIM2-208ENST00000416159 STAG3L3P0CL85 134 aa12.04□□□□□ -0.48
PDLIM2-208ENST00000416159 ARL14EPLP0DKL9 152 aa12.04□□□□□ -0.48
PDLIM2-208ENST00000416159 LINC00315P59091 139 aa12.04□□□□□ -0.48
PDLIM2-208ENST00000416159 HSD17B11Q8NBQ5 300 aa12.04□□□□□ -0.48
PDLIM2-208ENST00000416159 TVP23CQ96ET8 276 aa12.04□□□□□ -0.48
PDLIM2-208ENST00000416159 KCNS1Q96KK3 526 aa12.04□□□□□ -0.48
PDLIM2-208ENST00000416159 AQP10Q96PS8 301 aa12.04□□□□□ -0.48
PDLIM2-208ENST00000416159 PSMG3Q9BT73 122 aaPredicted RBP12.04□□□□□ -0.48
PDLIM2-208ENST00000416159 TRAV8-1A0A0A6YYK1 113 aa12.03□□□□□ -0.48
PDLIM2-208ENST00000416159 TRAV4A0A0B4J268 109 aa12.03□□□□□ -0.48
PDLIM2-208ENST00000416159 IGHV3-16A0A0C4DH30 117 aa12.03□□□□□ -0.48
PDLIM2-208ENST00000416159 MBP02144 154 aa12.03□□□□□ -0.48
PDLIM2-208ENST00000416159 SRIP30626 198 aa12.03□□□□□ -0.48
PDLIM2-208ENST00000416159 GNG5P63218 68 aa12.03□□□□□ -0.48
PDLIM2-208ENST00000416159 SERF2P84101 59 aa12.03□□□□□ -0.48
PDLIM2-208ENST00000416159 PCNPQ8WW12 178 aaKnown RBP12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms