RNA–Protein interactions for RNA: ENST00000415772.5

SBDSP1-201, Transcript of SBDS, ribosome maturation factor pseudogene 1, humanhuman

TSL 2

Gene SBDSP1, Length 733 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SBDSP1-201ENST00000415772 LINC00477Q96M19 166 aa10.72□□□□□ -0.69
SBDSP1-201ENST00000415772 PSMG3Q9BT73 122 aaPredicted RBP10.72□□□□□ -0.69
SBDSP1-201ENST00000415772 A0A1W2PPV4 95 aa10.71□□□□□ -0.69
SBDSP1-201ENST00000415772 OR7C2O60412 319 aa10.71□□□□□ -0.69
SBDSP1-201ENST00000415772 NXPH4O95158 308 aa10.71□□□□□ -0.69
SBDSP1-201ENST00000415772 GPX1P07203 203 aa10.71□□□□□ -0.69
SBDSP1-201ENST00000415772 SERF2P84101 59 aa10.71□□□□□ -0.69
SBDSP1-201ENST00000415772 CDPF1Q6NVV7 123 aa10.71□□□□□ -0.69
SBDSP1-201ENST00000415772 PQLC2Q6ZP29 291 aa10.71□□□□□ -0.69
SBDSP1-201ENST00000415772 OR2G3Q8NGZ4 309 aa10.71□□□□□ -0.69
SBDSP1-201ENST00000415772 BLNKQ8WV28 456 aa10.71□□□□□ -0.69
SBDSP1-201ENST00000415772 FXYD5Q96DB9 178 aa10.71□□□□□ -0.69
SBDSP1-201ENST00000415772 LRP1BQ9NZR2 4599 aa10.71□□□□□ -0.69
SBDSP1-201ENST00000415772 RGS13O14921 159 aa10.7□□□□□ -0.7
SBDSP1-201ENST00000415772 MBP02144 154 aa10.7□□□□□ -0.7
SBDSP1-201ENST00000415772 RNASE4P34096 147 aaKnown RBP10.7□□□□□ -0.7
SBDSP1-201ENST00000415772 SLAQ13239 276 aa10.7□□□□□ -0.7
SBDSP1-201ENST00000415772 VSIG2Q96IQ7 327 aa10.7□□□□□ -0.7
SBDSP1-201ENST00000415772 ARPC5LQ9BPX5 153 aa10.7□□□□□ -0.7
SBDSP1-201ENST00000415772 TNFSF18Q9UNG2 199 aa10.7□□□□□ -0.7
SBDSP1-201ENST00000415772 BORCS7-ASMTA0A0B4J1R7 106 aa10.69□□□□□ -0.7
SBDSP1-201ENST00000415772 IGHV3-53P01767 116 aa10.69□□□□□ -0.7
SBDSP1-201ENST00000415772 NMBP08949 121 aa10.69□□□□□ -0.7
SBDSP1-201ENST00000415772 ERCC8Q13216 396 aa10.69□□□□□ -0.7
SBDSP1-201ENST00000415772 ICAM4Q14773 271 aa10.69□□□□□ -0.7
SBDSP1-201ENST00000415772 Q5BKY6 102 aa10.69□□□□□ -0.7
SBDSP1-201ENST00000415772 C9orf47Q6ZRZ4 202 aa10.69□□□□□ -0.7
SBDSP1-201ENST00000415772 PRO0255Q9UI72 69 aa10.69□□□□□ -0.7
SBDSP1-201ENST00000415772 FXYD6-FXYD2A0A087WZ82 144 aa10.68□□□□□ -0.7
SBDSP1-201ENST00000415772 TRBV7-9A0A0J9YWB2 115 aa10.68□□□□□ -0.7
SBDSP1-201ENST00000415772 M0R3E3 92 aa10.68□□□□□ -0.7
SBDSP1-201ENST00000415772 TAAR5O14804 337 aa10.68□□□□□ -0.7
SBDSP1-201ENST00000415772 OR10J4P0C629 311 aa10.68□□□□□ -0.7
SBDSP1-201ENST00000415772 CSN1S1P47710 185 aa10.68□□□□□ -0.7
SBDSP1-201ENST00000415772 UBE2L3P68036 154 aaKnown RBP10.68□□□□□ -0.7
SBDSP1-201ENST00000415772 BTN1A1Q13410 526 aa10.68□□□□□ -0.7
SBDSP1-201ENST00000415772 MRPL23Q16540 153 aaKnown RBP10.68□□□□□ -0.7
SBDSP1-201ENST00000415772 ANXA2RQ3ZCQ2 193 aa10.68□□□□□ -0.7
SBDSP1-201ENST00000415772 TMEM78Q5T7P6 136 aa10.68□□□□□ -0.7
SBDSP1-201ENST00000415772 EXOC3-AS1Q8N2X6 119 aa10.68□□□□□ -0.7
SBDSP1-201ENST00000415772 ARL6IP6Q8N6S5 226 aa10.68□□□□□ -0.7
SBDSP1-201ENST00000415772 PCNPQ8WW12 178 aaKnown RBP10.68□□□□□ -0.7
SBDSP1-201ENST00000415772 C18orf15Q96N68 181 aa10.68□□□□□ -0.7
SBDSP1-201ENST00000415772 RBAKDNA6NC62 111 aa10.67□□□□□ -0.7
SBDSP1-201ENST00000415772 RNF222A6NCQ9 220 aa10.67□□□□□ -0.7
SBDSP1-201ENST00000415772 ZNF324O75467 553 aaPredicted RBP10.67□□□□□ -0.7
SBDSP1-201ENST00000415772 FUSP35637 526 aaKnown RBP eCLIP10.67□□□□□ -0.7
SBDSP1-201ENST00000415772 TCL1AP56279 114 aa10.67□□□□□ -0.7
SBDSP1-201ENST00000415772 FAM74A1Q5RGS3 127 aa10.67□□□□□ -0.7
SBDSP1-201ENST00000415772 HSD17B11Q8NBQ5 300 aa10.67□□□□□ -0.7
SBDSP1-201ENST00000415772 OR10G4Q8NGN3 311 aa10.67□□□□□ -0.7
SBDSP1-201ENST00000415772 OR10G9Q8NGN4 311 aa10.67□□□□□ -0.7
SBDSP1-201ENST00000415772 OR10G7Q8NGN6 311 aa10.67□□□□□ -0.7
SBDSP1-201ENST00000415772 ST6GAL2Q96JF0 529 aa10.67□□□□□ -0.7
SBDSP1-201ENST00000415772 MRPL16Q9NX20 251 aaKnown RBP10.67□□□□□ -0.7
SBDSP1-201ENST00000415772 KLF12Q9Y4X4 402 aa10.67□□□□□ -0.7
SBDSP1-201ENST00000415772 LY96Q9Y6Y9 160 aa10.67□□□□□ -0.7
SBDSP1-201ENST00000415772 TRGV4A0A0C4DH28 118 aa10.66□□□□□ -0.7
SBDSP1-201ENST00000415772 SPINK4O60575 86 aa10.66□□□□□ -0.7
SBDSP1-201ENST00000415772 CRISP2P16562 243 aa10.66□□□□□ -0.7
SBDSP1-201ENST00000415772 ATP6V0CP27449 155 aa10.66□□□□□ -0.7
SBDSP1-201ENST00000415772 RANP62826 216 aaKnown RBP10.66□□□□□ -0.7
SBDSP1-201ENST00000415772 CD300CQ08708 224 aa10.66□□□□□ -0.7
SBDSP1-201ENST00000415772 IBA57Q5T440 356 aaKnown RBP10.66□□□□□ -0.7
SBDSP1-201ENST00000415772 Q6ZRN7 208 aaPredicted RBP10.66□□□□□ -0.7
SBDSP1-201ENST00000415772 NEGR1Q7Z3B1 354 aa10.66□□□□□ -0.7
SBDSP1-201ENST00000415772 C11orf72Q8NBR9 251 aa10.66□□□□□ -0.7
SBDSP1-201ENST00000415772 FAM19A4Q96LR4 140 aa10.66□□□□□ -0.7
SBDSP1-201ENST00000415772 LINC00467Q9BRT7 94 aa10.66□□□□□ -0.7
SBDSP1-201ENST00000415772 AGPAT4-IT1Q9H0P7 198 aa10.66□□□□□ -0.7
SBDSP1-201ENST00000415772 HHLA3Q9XRX5 114 aa10.66□□□□□ -0.7
SBDSP1-201ENST00000415772 DNAH5Q8TE73 4624 aa10.65□□□□□ -0.7
SBDSP1-201ENST00000415772 KLLNB2CW77 178 aa10.65□□□□□ -0.7
SBDSP1-201ENST00000415772 EVI2AP22794 236 aa10.65□□□□□ -0.7
SBDSP1-201ENST00000415772 CDC34P49427 236 aaPredicted RBP10.65□□□□□ -0.7
SBDSP1-201ENST00000415772 RAB2AP61019 212 aa10.65□□□□□ -0.7
SBDSP1-201ENST00000415772 ZNF415Q09FC8 603 aa10.65□□□□□ -0.7
SBDSP1-201ENST00000415772 Q5VSD8 79 aa10.65□□□□□ -0.7
SBDSP1-201ENST00000415772 FAM122CQ6P4D5 195 aa10.65□□□□□ -0.7
SBDSP1-201ENST00000415772 PHYHIPLQ96FC7 376 aa10.65□□□□□ -0.7
SBDSP1-201ENST00000415772 C8orf49Q96NF6 230 aa10.65□□□□□ -0.7
SBDSP1-201ENST00000415772 OTORQ9NRC9 128 aa10.65□□□□□ -0.7
SBDSP1-201ENST00000415772 APOBP04114 4563 aaKnown RBP10.65□□□□□ -0.7
SBDSP1-201ENST00000415772 IGHV1OR15-1A0A075B7D0 117 aa10.64□□□□□ -0.71
SBDSP1-201ENST00000415772 G3V3Q6 166 aa10.64□□□□□ -0.71
SBDSP1-201ENST00000415772 STAG3L2P0CL84 134 aa10.64□□□□□ -0.71
SBDSP1-201ENST00000415772 STAG3L3P0CL85 134 aa10.64□□□□□ -0.71
SBDSP1-201ENST00000415772 SRIP30626 198 aa10.64□□□□□ -0.71
SBDSP1-201ENST00000415772 LYPD5Q6UWN5 251 aa10.64□□□□□ -0.71
SBDSP1-201ENST00000415772 VGLL1Q99990 258 aa10.64□□□□□ -0.71
SBDSP1-201ENST00000415772 ZNF492Q9P255 531 aa10.64□□□□□ -0.71
SBDSP1-201ENST00000415772 LENEPQ9Y5L5 61 aa10.64□□□□□ -0.71
SBDSP1-201ENST00000415772 FAM229AH3BQW9 127 aa10.63□□□□□ -0.71
SBDSP1-201ENST00000415772 DNAH10OSP0CZ25 163 aa10.63□□□□□ -0.71
SBDSP1-201ENST00000415772 CRYBA4P53673 196 aa10.63□□□□□ -0.71
SBDSP1-201ENST00000415772 ZNF345Q14585 488 aa10.63□□□□□ -0.71
SBDSP1-201ENST00000415772 RPL7L1Q6DKI1 246 aaKnown RBP10.63□□□□□ -0.71
SBDSP1-201ENST00000415772 CMTM2Q8TAZ6 248 aa10.63□□□□□ -0.71
SBDSP1-201ENST00000415772 TMED6Q8WW62 240 aa10.63□□□□□ -0.71
SBDSP1-201ENST00000415772 RAB24Q969Q5 203 aa10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 137.5 ms