RNA–Protein interactions for RNA: ENST00000414411.3

DDB1-202, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 1,904 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-202ENST00000414411 NDUFA11Q86Y39 141 aa7.6□□□□□ -1.19
DDB1-202ENST00000414411 ZNF414Q96IQ9 312 aa7.6□□□□□ -1.19
DDB1-202ENST00000414411 PEF1Q9UBV8 284 aaKnown RBP7.6□□□□□ -1.19
DDB1-202ENST00000414411 TRBV6-1A0A0K0K1D8 114 aa7.6□□□□□ -1.19
DDB1-202ENST00000414411 A0A1B0GXF2 115 aa7.6□□□□□ -1.19
DDB1-202ENST00000414411 A8MWP6 167 aa7.6□□□□□ -1.19
DDB1-202ENST00000414411 MRPS12O15235 138 aaKnown RBP7.6□□□□□ -1.19
DDB1-202ENST00000414411 P01737 135 aa7.6□□□□□ -1.19
DDB1-202ENST00000414411 GDF5OSQ5U4N7 250 aa7.6□□□□□ -1.19
DDB1-202ENST00000414411 SIGLEC15Q6ZMC9 328 aa7.6□□□□□ -1.19
DDB1-202ENST00000414411 GOLT1AQ6ZVE7 132 aa7.6□□□□□ -1.19
DDB1-202ENST00000414411 LYPD1Q8N2G4 141 aa7.6□□□□□ -1.19
DDB1-202ENST00000414411 KCNS1Q96KK3 526 aa7.6□□□□□ -1.19
DDB1-202ENST00000414411 RCHY1Q96PM5 261 aa7.6□□□□□ -1.19
DDB1-202ENST00000414411 SAMD10Q9BYL1 202 aa7.6□□□□□ -1.19
DDB1-202ENST00000414411 OR2T8A6NH00 312 aa7.59□□□□□ -1.19
DDB1-202ENST00000414411 A8MWL6 223 aa7.59□□□□□ -1.19
DDB1-202ENST00000414411 NPIPB6E9PJ23 425 aa7.59□□□□□ -1.19
DDB1-202ENST00000414411 ZNF253O75346 499 aa7.59□□□□□ -1.19
DDB1-202ENST00000414411 GPR183P32249 361 aa7.59□□□□□ -1.19
DDB1-202ENST00000414411 KRTAP21-3Q3LHN1 58 aa7.59□□□□□ -1.19
DDB1-202ENST00000414411 Q56UQ5 140 aa7.59□□□□□ -1.19
DDB1-202ENST00000414411 C12orf54Q6X4T0 127 aa7.59□□□□□ -1.19
DDB1-202ENST00000414411 S100A7AQ86SG5 101 aa7.59□□□□□ -1.19
DDB1-202ENST00000414411 C3orf56Q8N813 242 aa7.59□□□□□ -1.19
DDB1-202ENST00000414411 KLHL30-AS1Q8NEE0 82 aa7.59□□□□□ -1.19
DDB1-202ENST00000414411 ZNF479Q96JC4 524 aa7.59□□□□□ -1.19
DDB1-202ENST00000414411 C17orf77Q96MU5 243 aa7.59□□□□□ -1.19
DDB1-202ENST00000414411 A0A1W2PRX2 142 aa7.58□□□□□ -1.2
DDB1-202ENST00000414411 GPX1P07203 203 aa7.58□□□□□ -1.2
DDB1-202ENST00000414411 DEFB136Q30KP8 78 aa7.58□□□□□ -1.2
DDB1-202ENST00000414411 TCF24Q7RTU0 167 aa7.58□□□□□ -1.2
DDB1-202ENST00000414411 PRNTQ86SH4 94 aa7.58□□□□□ -1.2
DDB1-202ENST00000414411 TMEM75Q8N9X5 138 aa7.58□□□□□ -1.2
DDB1-202ENST00000414411 GTSF1Q8WW33 167 aa7.58□□□□□ -1.2
DDB1-202ENST00000414411 GFRA4Q9GZZ7 299 aa7.58□□□□□ -1.2
DDB1-202ENST00000414411 IGHV4OR15-8A0A075B7B6 117 aa7.58□□□□□ -1.2
DDB1-202ENST00000414411 A0A087WW49 117 aa7.58□□□□□ -1.2
DDB1-202ENST00000414411 KIR2DL5BA0A0G2JN68 375 aa7.58□□□□□ -1.2
DDB1-202ENST00000414411 KIR2DL5BA0A0G2JPC4 375 aa7.58□□□□□ -1.2
DDB1-202ENST00000414411 ZNF561-AS1K7EIQ3 104 aa7.58□□□□□ -1.2
DDB1-202ENST00000414411 HBBP68871 147 aa7.58□□□□□ -1.2
DDB1-202ENST00000414411 FHL3Q13643 280 aa7.58□□□□□ -1.2
DDB1-202ENST00000414411 PDE6HQ13956 83 aa7.58□□□□□ -1.2
DDB1-202ENST00000414411 SHISA2Q6UWI4 295 aa7.58□□□□□ -1.2
DDB1-202ENST00000414411 KIR2DL5AQ8N109 375 aa7.58□□□□□ -1.2
DDB1-202ENST00000414411 OR11H1Q8NG94 326 aa7.58□□□□□ -1.2
DDB1-202ENST00000414411 OR1N2Q8NGR9 330 aa7.58□□□□□ -1.2
DDB1-202ENST00000414411 C18orf32Q8TCD1 76 aa7.58□□□□□ -1.2
DDB1-202ENST00000414411 DAZAP1Q96EP5 407 aaKnown RBP7.58□□□□□ -1.2
DDB1-202ENST00000414411 NOTCH3Q9UM47 2321 aa7.57□□□□□ -1.2
DDB1-202ENST00000414411 A0A1W2PS18 150 aa7.57□□□□□ -1.2
DDB1-202ENST00000414411 FAM231BA6NCW3 169 aa7.57□□□□□ -1.2
DDB1-202ENST00000414411 ZNF324O75467 553 aaPredicted RBP7.57□□□□□ -1.2
DDB1-202ENST00000414411 AMTP48728 403 aa7.57□□□□□ -1.2
DDB1-202ENST00000414411 CAMPP49913 170 aa7.57□□□□□ -1.2
DDB1-202ENST00000414411 NSUN5P1Q3KNT7 163 aa7.57□□□□□ -1.2
DDB1-202ENST00000414411 C1orf194Q5T5A4 169 aa7.57□□□□□ -1.2
DDB1-202ENST00000414411 TOMM20LQ6UXN7 152 aa7.57□□□□□ -1.2
DDB1-202ENST00000414411 OR4B1Q8NGF8 309 aa7.57□□□□□ -1.2
DDB1-202ENST00000414411 NDUFAF3Q9BU61 184 aa7.57□□□□□ -1.2
DDB1-202ENST00000414411 SSBP4Q9BWG4 385 aaPredicted RBP7.57□□□□□ -1.2
DDB1-202ENST00000414411 ZNF705FA8MVS1 300 aaPredicted RBP7.56□□□□□ -1.2
DDB1-202ENST00000414411 K7EQM0 130 aa7.56□□□□□ -1.2
DDB1-202ENST00000414411 CCL24O00175 119 aa7.56□□□□□ -1.2
DDB1-202ENST00000414411 ZNF705DP0CH99 300 aaPredicted RBP7.56□□□□□ -1.2
DDB1-202ENST00000414411 ZNF705BP0CI00 300 aaPredicted RBP7.56□□□□□ -1.2
DDB1-202ENST00000414411 KLF5Q13887 457 aaPredicted RBP7.56□□□□□ -1.2
DDB1-202ENST00000414411 PSG3Q16557 428 aa7.56□□□□□ -1.2
DDB1-202ENST00000414411 TEX43Q6ZNM6 134 aa7.56□□□□□ -1.2
DDB1-202ENST00000414411 GPHB5Q86YW7 130 aa7.56□□□□□ -1.2
DDB1-202ENST00000414411 ZC2HC1AQ96GY0 325 aa7.56□□□□□ -1.2
DDB1-202ENST00000414411 DUX3Q96PT4 197 aa7.56□□□□□ -1.2
DDB1-202ENST00000414411 ALKBH7Q9BT30 221 aaPredicted RBP7.56□□□□□ -1.2
DDB1-202ENST00000414411 ZFP30Q9Y2G7 519 aa7.56□□□□□ -1.2
DDB1-202ENST00000414411 IGHV3-35A0A0C4DH35 117 aa7.56□□□□□ -1.2
DDB1-202ENST00000414411 ZNF785A8K8V0 405 aa7.56□□□□□ -1.2
DDB1-202ENST00000414411 DIRC3C9JPN6 131 aa7.56□□□□□ -1.2
DDB1-202ENST00000414411 LINC01619G3V211 115 aa7.56□□□□□ -1.2
DDB1-202ENST00000414411 M0R3E3 92 aa7.56□□□□□ -1.2
DDB1-202ENST00000414411 PMCHP20382 165 aa7.56□□□□□ -1.2
DDB1-202ENST00000414411 HOXD3P31249 432 aaPredicted RBP7.56□□□□□ -1.2
DDB1-202ENST00000414411 OR2D3Q8NGH3 330 aa7.56□□□□□ -1.2
DDB1-202ENST00000414411 PGLYRP4Q96LB8 373 aa7.56□□□□□ -1.2
DDB1-202ENST00000414411 NRN1Q9NPD7 142 aa7.56□□□□□ -1.2
DDB1-202ENST00000414411 PSG8Q9UQ74 426 aa7.56□□□□□ -1.2
DDB1-202ENST00000414411 A8MZ25 164 aa7.55□□□□□ -1.2
DDB1-202ENST00000414411 RPL7P18124 248 aaKnown RBP7.55□□□□□ -1.2
DDB1-202ENST00000414411 AAMDCQ9H7C9 122 aa7.55□□□□□ -1.2
DDB1-202ENST00000414411 CMYA5Q8N3K9 4069 aa7.55□□□□□ -1.2
DDB1-202ENST00000414411 NDUFA4O00483 81 aa7.54□□□□□ -1.2
DDB1-202ENST00000414411 SLURP1P55000 103 aa7.54□□□□□ -1.2
DDB1-202ENST00000414411 FOXA3P55318 350 aaPredicted RBP7.54□□□□□ -1.2
DDB1-202ENST00000414411 TIRAPP58753 221 aa7.54□□□□□ -1.2
DDB1-202ENST00000414411 KRTDAPP60985 99 aa7.54□□□□□ -1.2
DDB1-202ENST00000414411 UNQ9165/PRO28630Q6UXU0 137 aa7.54□□□□□ -1.2
DDB1-202ENST00000414411 NIT1Q86X76 327 aa7.54□□□□□ -1.2
DDB1-202ENST00000414411 ASCL2Q99929 193 aa7.54□□□□□ -1.2
DDB1-202ENST00000414411 DNHD1Q96M86 4753 aa7.54□□□□□ -1.2
DDB1-202ENST00000414411 LGALS9O00182 355 aa7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 75.2 ms