RNA–Protein interactions for RNA: ENST00000414174.1

SF3B1-203, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 4

Gene SF3B1, Length 593 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-203ENST00000414174 NMES1Q9C002 83 aa2.6□□□□□ -1.99
SF3B1-203ENST00000414174 ZNF71Q9NQZ8 489 aaPredicted RBP2.6□□□□□ -1.99
SF3B1-203ENST00000414174 KLK13Q9UKR3 277 aa2.6□□□□□ -1.99
SF3B1-203ENST00000414174 PATJQ8NI35 1801 aa2.6□□□□□ -1.99
SF3B1-203ENST00000414174 CLTCQ00610 1675 aaKnown RBP2.6□□□□□ -1.99
SF3B1-203ENST00000414174 DOCK4Q8N1I0 1966 aa2.6□□□□□ -1.99
SF3B1-203ENST00000414174 CRYBG1Q9Y4K1 1723 aa2.59□□□□□ -1.99
SF3B1-203ENST00000414174 PTPRMP28827 1452 aa2.59□□□□□ -1.99
SF3B1-203ENST00000414174 ARFGEF2Q9Y6D5 1785 aa2.59□□□□□ -1.99
SF3B1-203ENST00000414174 IGLV3-9A0A075B6K5 115 aa2.59□□□□□ -1.99
SF3B1-203ENST00000414174 LY6G6EA0A0G2JKS1 128 aa2.59□□□□□ -1.99
SF3B1-203ENST00000414174 C3orf84H3BNL1 204 aa2.59□□□□□ -1.99
SF3B1-203ENST00000414174 J3QLW9 94 aa2.59□□□□□ -1.99
SF3B1-203ENST00000414174 CHTF8P0CG12 524 aa2.59□□□□□ -1.99
SF3B1-203ENST00000414174 RNASE2P10153 161 aaKnown RBP2.59□□□□□ -1.99
SF3B1-203ENST00000414174 BSPH1Q075Z2 132 aa2.59□□□□□ -1.99
SF3B1-203ENST00000414174 FAM72AQ5TYM5 149 aa2.59□□□□□ -1.99
SF3B1-203ENST00000414174 LYPD5Q6UWN5 251 aa2.59□□□□□ -1.99
SF3B1-203ENST00000414174 MIR17HGQ75NE6 70 aa2.59□□□□□ -1.99
SF3B1-203ENST00000414174 NABP2Q9BQ15 211 aa2.59□□□□□ -1.99
SF3B1-203ENST00000414174 SLC50A1Q9BRV3 221 aa2.59□□□□□ -1.99
SF3B1-203ENST00000414174 XAGE1AQ9HD64 81 aa2.59□□□□□ -1.99
SF3B1-203ENST00000414174 LINC00474Q9P2X8 69 aa2.59□□□□□ -1.99
SF3B1-203ENST00000414174 ARL2-SNX15V9GYD0 113 aa2.59□□□□□ -1.99
SF3B1-203ENST00000414174 RAI1Q7Z5J4 1906 aaPredicted RBP2.59□□□□□ -1.99
SF3B1-203ENST00000414174 ALS2Q96Q42 1657 aa2.59□□□□□ -2
SF3B1-203ENST00000414174 RGPD3A6NKT7 1758 aaPredicted RBP2.59□□□□□ -2
SF3B1-203ENST00000414174 SIPA1L3O60292 1781 aaPredicted RBP2.59□□□□□ -2
SF3B1-203ENST00000414174 TULP4Q9NRJ4 1543 aa2.58□□□□□ -2
SF3B1-203ENST00000414174 MED1Q15648 1581 aaPredicted RBP2.58□□□□□ -2
SF3B1-203ENST00000414174 GCC2Q8IWJ2 1684 aa2.58□□□□□ -2
SF3B1-203ENST00000414174 TRAV13-2A0A0B4J235 113 aa2.58□□□□□ -2
SF3B1-203ENST00000414174 TRAV3A0A0B4J244 114 aa2.58□□□□□ -2
SF3B1-203ENST00000414174 PIGBOS1A0A0B4J2F0 54 aa2.58□□□□□ -2
SF3B1-203ENST00000414174 KRTAP16-1A8MUX0 517 aa2.58□□□□□ -2
SF3B1-203ENST00000414174 H7BZZ5 65 aa2.58□□□□□ -2
SF3B1-203ENST00000414174 LEPROTO15243 131 aa2.58□□□□□ -2
SF3B1-203ENST00000414174 PIRTP0C851 137 aa2.58□□□□□ -2
SF3B1-203ENST00000414174 SMIM11AP58511 58 aa2.58□□□□□ -2
SF3B1-203ENST00000414174 UBE2D3P61077 147 aa2.58□□□□□ -2
SF3B1-203ENST00000414174 UBE2D2P62837 147 aa2.58□□□□□ -2
SF3B1-203ENST00000414174 RBM3P98179 157 aaKnown RBP2.58□□□□□ -2
SF3B1-203ENST00000414174 SSBP1Q04837 148 aaKnown RBP2.58□□□□□ -2
SF3B1-203ENST00000414174 EGFEM1PQ0D2K5 195 aa2.58□□□□□ -2
SF3B1-203ENST00000414174 KLKP1Q107X0 134 aa2.58□□□□□ -2
SF3B1-203ENST00000414174 RHOHQ15669 191 aa2.58□□□□□ -2
SF3B1-203ENST00000414174 ZNF56Q15929 161 aa2.58□□□□□ -2
SF3B1-203ENST00000414174 FAM53AQ6NSI3 398 aaPredicted RBP2.58□□□□□ -2
SF3B1-203ENST00000414174 SLC48A1Q6P1K1 146 aa2.58□□□□□ -2
SF3B1-203ENST00000414174 SOSTDC1Q6X4U4 206 aa2.58□□□□□ -2
SF3B1-203ENST00000414174 C6orf201Q7Z4U5 140 aa2.58□□□□□ -2
SF3B1-203ENST00000414174 NUP37Q8NFH4 326 aa2.58□□□□□ -2
SF3B1-203ENST00000414174 CLEC2BQ92478 149 aa2.58□□□□□ -2
SF3B1-203ENST00000414174 B9D2Q9BPU9 175 aa2.58□□□□□ -2
SF3B1-203ENST00000414174 LINC00597Q9H2U6 94 aa2.58□□□□□ -2
SF3B1-203ENST00000414174 ABRACLQ9P1F3 81 aa2.58□□□□□ -2
SF3B1-203ENST00000414174 HILPDAQ9Y5L2 63 aa2.58□□□□□ -2
SF3B1-203ENST00000414174 RGPD8O14715 1765 aaPredicted RBP2.58□□□□□ -2
SF3B1-203ENST00000414174 RGPD5Q99666 1765 aa2.58□□□□□ -2
SF3B1-203ENST00000414174 ZNF646O15015 1829 aaPredicted RBP2.58□□□□□ -2
SF3B1-203ENST00000414174 PDCD11Q14690 1871 aaKnown RBP2.58□□□□□ -2
SF3B1-203ENST00000414174 RALGAPA2Q2PPJ7 1873 aa2.58□□□□□ -2
SF3B1-203ENST00000414174 C2orf16Q68DN1 1984 aa2.58□□□□□ -2
SF3B1-203ENST00000414174 SCN5AQ14524 2016 aa2.58□□□□□ -2
SF3B1-203ENST00000414174 NEXMIFQ5QGS0 1516 aa2.58□□□□□ -2
SF3B1-203ENST00000414174 DOCK8Q8NF50 2099 aa2.57□□□□□ -2
SF3B1-203ENST00000414174 IQGAP1P46940 1657 aa2.57□□□□□ -2
SF3B1-203ENST00000414174 ARHGEF28Q8N1W1 1705 aaKnown RBP2.57□□□□□ -2
SF3B1-203ENST00000414174 BTAF1O14981 1849 aa2.57□□□□□ -2
SF3B1-203ENST00000414174 IGLV5-37A0A075B6J1 123 aa2.57□□□□□ -2
SF3B1-203ENST00000414174 IGKV1D-17A0A075B6S4 117 aa2.57□□□□□ -2
SF3B1-203ENST00000414174 IGHV3-74A0A0B4J1X5 117 aa2.57□□□□□ -2
SF3B1-203ENST00000414174 IGHV3-16A0A0C4DH30 117 aa2.57□□□□□ -2
SF3B1-203ENST00000414174 C19orf71A6NCJ1 209 aa2.57□□□□□ -2
SF3B1-203ENST00000414174 KRTAP4-16G5E9R7 235 aaPredicted RBP2.57□□□□□ -2
SF3B1-203ENST00000414174 HCRTO43612 131 aa2.57□□□□□ -2
SF3B1-203ENST00000414174 NPYP01303 97 aa2.57□□□□□ -2
SF3B1-203ENST00000414174 GCHFRP30047 84 aa2.57□□□□□ -2
SF3B1-203ENST00000414174 KISS1Q15726 138 aa2.57□□□□□ -2
SF3B1-203ENST00000414174 PRR4Q16378 134 aa2.57□□□□□ -2
SF3B1-203ENST00000414174 CASC10Q5T4H9 136 aa2.57□□□□□ -2
SF3B1-203ENST00000414174 ZNF497Q6ZNH5 498 aa2.57□□□□□ -2
SF3B1-203ENST00000414174 PDPNQ86YL7 162 aa2.57□□□□□ -2
SF3B1-203ENST00000414174 Q8N7P7 452 aa2.57□□□□□ -2
SF3B1-203ENST00000414174 FAM103A1Q9BTL3 118 aaKnown RBP2.57□□□□□ -2
SF3B1-203ENST00000414174 DYNLRB1Q9NP97 96 aa2.57□□□□□ -2
SF3B1-203ENST00000414174 DPM3Q9P2X0 92 aa2.57□□□□□ -2
SF3B1-203ENST00000414174 CSAG2Q9Y5P2 127 aa2.57□□□□□ -2
SF3B1-203ENST00000414174 MCM3APO60318 1980 aa2.57□□□□□ -2
SF3B1-203ENST00000414174 SCN9AQ15858 1988 aa2.57□□□□□ -2
SF3B1-203ENST00000414174 ALKQ9UM73 1620 aa2.57□□□□□ -2
SF3B1-203ENST00000414174 NUP188Q5SRE5 1749 aa2.56□□□□□ -2
SF3B1-203ENST00000414174 ANKRD36CQ5JPF3 1778 aa2.56□□□□□ -2
SF3B1-203ENST00000414174 IGHV3OR16-10A0A075B7F0 116 aa2.56□□□□□ -2
SF3B1-203ENST00000414174 IGKV1-6A0A0C4DH72 117 aa2.56□□□□□ -2
SF3B1-203ENST00000414174 MYMXA0A1B0GTQ4 84 aa2.56□□□□□ -2
SF3B1-203ENST00000414174 A0A1B0GVT2 93 aa2.56□□□□□ -2
SF3B1-203ENST00000414174 CRYM-AS1A6NIL9 109 aa2.56□□□□□ -2
SF3B1-203ENST00000414174 INAFM1C9JVW0 142 aa2.56□□□□□ -2
SF3B1-203ENST00000414174 GNRH2O43555 120 aa2.56□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 175.1 ms