RNA–Protein interactions for RNA: ENST00000413852.5

SEMA3F-202, Transcript of semaphorin 3F, humanhuman

TSL 1 (best) BASIC

Gene SEMA3F, Length 3,212 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3F-202ENST00000413852 ECSCRQ19T08 205 aa11.27□□□□□ -0.61
SEMA3F-202ENST00000413852 ARPC1AQ92747 370 aa11.27□□□□□ -0.61
SEMA3F-202ENST00000413852 H3BMG7 143 aa11.27□□□□□ -0.61
SEMA3F-202ENST00000413852 IGKCP01834 107 aa11.27□□□□□ -0.61
SEMA3F-202ENST00000413852 SMAGPQ0VAQ4 97 aa11.26□□□□□ -0.61
SEMA3F-202ENST00000413852 CRYBG3Q68DQ2 2970 aa11.26□□□□□ -0.61
SEMA3F-202ENST00000413852 VSTM5A8MXK1 200 aa11.26□□□□□ -0.61
SEMA3F-202ENST00000413852 TNFRSF14Q92956 283 aa11.26□□□□□ -0.61
SEMA3F-202ENST00000413852 SMIM17P0DL12 118 aa11.26□□□□□ -0.61
SEMA3F-202ENST00000413852 INSL3P51460 131 aa11.26□□□□□ -0.61
SEMA3F-202ENST00000413852 S100A7AQ86SG5 101 aa11.26□□□□□ -0.61
SEMA3F-202ENST00000413852 PSMG3-AS1Q96PY0 264 aa11.26□□□□□ -0.61
SEMA3F-202ENST00000413852 LINC00527Q9UJ94 153 aa11.26□□□□□ -0.61
SEMA3F-202ENST00000413852 CD3EP07766 207 aa11.25□□□□□ -0.61
SEMA3F-202ENST00000413852 IGF2RP11717 2491 aa11.25□□□□□ -0.61
SEMA3F-202ENST00000413852 DPF1Q92782 380 aa11.25□□□□□ -0.61
SEMA3F-202ENST00000413852 CLEC3BP05452 202 aa11.24□□□□□ -0.61
SEMA3F-202ENST00000413852 RPL7P18124 248 aaKnown RBP11.24□□□□□ -0.61
SEMA3F-202ENST00000413852 PHLDA1Q8WV24 401 aaPredicted RBP11.24□□□□□ -0.61
SEMA3F-202ENST00000413852 COL25A1Q9BXS0 654 aaPredicted RBP11.24□□□□□ -0.61
SEMA3F-202ENST00000413852 FABP5P3A8MUU1 101 aa11.24□□□□□ -0.61
SEMA3F-202ENST00000413852 G3V318 75 aa11.24□□□□□ -0.61
SEMA3F-202ENST00000413852 PDE6HQ13956 83 aa11.24□□□□□ -0.61
SEMA3F-202ENST00000413852 AGPAT4-IT1Q9H0P7 198 aa11.24□□□□□ -0.61
SEMA3F-202ENST00000413852 BMI1P35226 326 aa11.23□□□□□ -0.61
SEMA3F-202ENST00000413852 ETDBQ3ZM63 59 aa11.23□□□□□ -0.61
SEMA3F-202ENST00000413852 TSSC4Q9Y5U2 329 aaPredicted RBP11.23□□□□□ -0.61
SEMA3F-202ENST00000413852 C15orf32Q32M92 178 aa11.23□□□□□ -0.61
SEMA3F-202ENST00000413852 CLEC19AQ6UXS0 136 aa11.23□□□□□ -0.61
SEMA3F-202ENST00000413852 WFDC12Q8WWY7 111 aa11.23□□□□□ -0.61
SEMA3F-202ENST00000413852 RAB1BQ9H0U4 201 aa11.23□□□□□ -0.61
SEMA3F-202ENST00000413852 B9A039 149 aa11.22□□□□□ -0.61
SEMA3F-202ENST00000413852 SIVA1O15304 175 aa11.22□□□□□ -0.61
SEMA3F-202ENST00000413852 AZU1P20160 251 aa11.22□□□□□ -0.61
SEMA3F-202ENST00000413852 DPM2O94777 84 aa11.22□□□□□ -0.61
SEMA3F-202ENST00000413852 CEND1Q8N111 149 aa11.22□□□□□ -0.61
SEMA3F-202ENST00000413852 H3BVH4 76 aa11.22□□□□□ -0.61
SEMA3F-202ENST00000413852 PRR9Q5T870 116 aa11.22□□□□□ -0.61
SEMA3F-202ENST00000413852 ZMAT4Q9H898 229 aa11.22□□□□□ -0.61
SEMA3F-202ENST00000413852 IGKV3-7A0A075B6H7 116 aa11.21□□□□□ -0.61
SEMA3F-202ENST00000413852 PTPRQQ9UMZ3 2332 aa11.21□□□□□ -0.61
SEMA3F-202ENST00000413852 IGLV2-18A0A075B6J9 118 aa11.21□□□□□ -0.62
SEMA3F-202ENST00000413852 IGHV7-81A0A0B4J1V7 117 aa11.21□□□□□ -0.62
SEMA3F-202ENST00000413852 EMP1P54849 157 aa11.21□□□□□ -0.62
SEMA3F-202ENST00000413852 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa11.21□□□□□ -0.62
SEMA3F-202ENST00000413852 IGLL5B9A064 214 aa11.2□□□□□ -0.62
SEMA3F-202ENST00000413852 NPBQ8NG41 125 aa11.2□□□□□ -0.62
SEMA3F-202ENST00000413852 OR5A1Q8NGJ0 315 aa11.2□□□□□ -0.62
SEMA3F-202ENST00000413852 HIST1H4GQ99525 98 aa11.2□□□□□ -0.62
SEMA3F-202ENST00000413852 ATP5G2Q06055 141 aa11.2□□□□□ -0.62
SEMA3F-202ENST00000413852 SAMD13Q5VXD3 122 aa11.2□□□□□ -0.62
SEMA3F-202ENST00000413852 VMO1Q7Z5L0 202 aa11.2□□□□□ -0.62
SEMA3F-202ENST00000413852 ZFP36P26651 326 aaKnown RBP11.2□□□□□ -0.62
SEMA3F-202ENST00000413852 CYSLTR1Q9Y271 337 aa11.2□□□□□ -0.62
SEMA3F-202ENST00000413852 CSMD2Q7Z408 3487 aa11.19□□□□□ -0.62
SEMA3F-202ENST00000413852 M0R381 172 aa11.19□□□□□ -0.62
SEMA3F-202ENST00000413852 NRACQ8N912 160 aa11.19□□□□□ -0.62
SEMA3F-202ENST00000413852 RPL39LQ96EH5 51 aaKnown RBP11.19□□□□□ -0.62
SEMA3F-202ENST00000413852 C12orf74Q32Q52 190 aa11.19□□□□□ -0.62
SEMA3F-202ENST00000413852 SPANXN1Q5VSR9 72 aa11.19□□□□□ -0.62
SEMA3F-202ENST00000413852 TTC9CQ8N5M4 171 aa11.19□□□□□ -0.62
SEMA3F-202ENST00000413852 GLMPQ8WWB7 406 aa11.19□□□□□ -0.62
SEMA3F-202ENST00000413852 ZNF479Q96JC4 524 aa11.19□□□□□ -0.62
SEMA3F-202ENST00000413852 MSRB2Q9Y3D2 182 aa11.19□□□□□ -0.62
SEMA3F-202ENST00000413852 IGHV3OR16-10A0A075B7F0 116 aa11.18□□□□□ -0.62
SEMA3F-202ENST00000413852 CLEC2AQ6UVW9 174 aa11.18□□□□□ -0.62
SEMA3F-202ENST00000413852 NXT2Q9NPJ8 142 aaKnown RBP11.18□□□□□ -0.62
SEMA3F-202ENST00000413852 MUC6Q6W4X9 2439 aa11.18□□□□□ -0.62
SEMA3F-202ENST00000413852 TRAV8-2A0A0B4J237 113 aa11.18□□□□□ -0.62
SEMA3F-202ENST00000413852 IGHV7-4-1A0A0J9YVY3 117 aa11.18□□□□□ -0.62
SEMA3F-202ENST00000413852 Q8N8P6 123 aa11.18□□□□□ -0.62
SEMA3F-202ENST00000413852 CLPSL1A2RUU4 121 aa11.18□□□□□ -0.62
SEMA3F-202ENST00000413852 BUB3O43684 328 aa11.18□□□□□ -0.62
SEMA3F-202ENST00000413852 LY6G5BQ8NDX9 201 aa11.18□□□□□ -0.62
SEMA3F-202ENST00000413852 MYOZ3Q8TDC0 251 aa11.18□□□□□ -0.62
SEMA3F-202ENST00000413852 RNF5Q99942 180 aa11.18□□□□□ -0.62
SEMA3F-202ENST00000413852 ATP6V0E1O15342 81 aa11.17□□□□□ -0.62
SEMA3F-202ENST00000413852 TGFAP01135 160 aa11.17□□□□□ -0.62
SEMA3F-202ENST00000413852 OR11H6Q8NGC7 330 aa11.17□□□□□ -0.62
SEMA3F-202ENST00000413852 LAGE3Q14657 143 aa11.17□□□□□ -0.62
SEMA3F-202ENST00000413852 SPAG8Q99932 426 aaPredicted RBP11.17□□□□□ -0.62
SEMA3F-202ENST00000413852 SPANXB1Q9NS25 103 aaPredicted RBP11.17□□□□□ -0.62
SEMA3F-202ENST00000413852 ZFAND3Q9H8U3 227 aa11.16□□□□□ -0.62
SEMA3F-202ENST00000413852 CELSR2Q9HCU4 2923 aa11.16□□□□□ -0.62
SEMA3F-202ENST00000413852 LINC01559Q495D7 138 aa11.16□□□□□ -0.62
SEMA3F-202ENST00000413852 TMEM219Q86XT9 240 aa11.16□□□□□ -0.62
SEMA3F-202ENST00000413852 SRSF8Q9BRL6 282 aaKnown RBP11.16□□□□□ -0.62
SEMA3F-202ENST00000413852 Q8N9W7 124 aa11.16□□□□□ -0.62
SEMA3F-202ENST00000413852 KLHL30-AS1Q8NEE0 82 aa11.16□□□□□ -0.62
SEMA3F-202ENST00000413852 CCDC140Q96MF4 163 aa11.16□□□□□ -0.62
SEMA3F-202ENST00000413852 HIF1ANQ9NWT6 349 aa11.16□□□□□ -0.62
SEMA3F-202ENST00000413852 E9PLD3 99 aa11.15□□□□□ -0.62
SEMA3F-202ENST00000413852 F6UB75 175 aa11.15□□□□□ -0.62
SEMA3F-202ENST00000413852 CEACAM3P40198 252 aa11.15□□□□□ -0.62
SEMA3F-202ENST00000413852 COX8CQ7Z4L0 72 aa11.15□□□□□ -0.62
SEMA3F-202ENST00000413852 C14orf178Q8N769 122 aaPredicted RBP11.15□□□□□ -0.62
SEMA3F-202ENST00000413852 C20orf173Q96LM9 149 aa11.15□□□□□ -0.62
SEMA3F-202ENST00000413852 PRSS29PA6NIE9 313 aa11.15□□□□□ -0.62
SEMA3F-202ENST00000413852 ODF3BA8MYP8 253 aa11.15□□□□□ -0.62
SEMA3F-202ENST00000413852 FOXI2Q6ZQN5 318 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms