RNA–Protein interactions for RNA: ENST00000413806.7

SMARCA4-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 5 BASIC

Gene SMARCA4, Length 5,512 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-202ENST00000413806 PRR20CP86479 221 aa10.93□□□□□ -0.66
SMARCA4-202ENST00000413806 PRR20DP86480 221 aa10.93□□□□□ -0.66
SMARCA4-202ENST00000413806 PRR20BP86481 221 aa10.93□□□□□ -0.66
SMARCA4-202ENST00000413806 PRR20AP86496 221 aa10.93□□□□□ -0.66
SMARCA4-202ENST00000413806 PRR25Q96S07 402 aa10.93□□□□□ -0.66
SMARCA4-202ENST00000413806 A0A087WX48 190 aa10.93□□□□□ -0.66
SMARCA4-202ENST00000413806 PRR30Q53SZ7 412 aaPredicted RBP10.93□□□□□ -0.66
SMARCA4-202ENST00000413806 MRPL35Q9NZE8 188 aaKnown RBP10.93□□□□□ -0.66
SMARCA4-202ENST00000413806 KIAA1671Q9BY89 1806 aa10.93□□□□□ -0.66
SMARCA4-202ENST00000413806 RUSC1-AS1Q66K80 236 aa10.93□□□□□ -0.66
SMARCA4-202ENST00000413806 FXYD5Q96DB9 178 aa10.93□□□□□ -0.66
SMARCA4-202ENST00000413806 K7EM74 188 aa10.92□□□□□ -0.66
SMARCA4-202ENST00000413806 PRSS29PA6NIE9 313 aa10.92□□□□□ -0.66
SMARCA4-202ENST00000413806 RS1O15537 224 aa10.92□□□□□ -0.66
SMARCA4-202ENST00000413806 TCTEX1D4Q5JR98 221 aa10.92□□□□□ -0.66
SMARCA4-202ENST00000413806 FAM215AQ9Y5M1 114 aa10.92□□□□□ -0.66
SMARCA4-202ENST00000413806 ICE1Q9Y2F5 2266 aa10.92□□□□□ -0.66
SMARCA4-202ENST00000413806 COA6Q5JTJ3 125 aaKnown RBP10.92□□□□□ -0.66
SMARCA4-202ENST00000413806 TMEM243Q9BU79 118 aa10.92□□□□□ -0.66
SMARCA4-202ENST00000413806 IGLL5B9A064 214 aa10.92□□□□□ -0.66
SMARCA4-202ENST00000413806 IGLC1P0CG04 106 aa10.92□□□□□ -0.66
SMARCA4-202ENST00000413806 C6orf226Q5I0X4 101 aa10.91□□□□□ -0.66
SMARCA4-202ENST00000413806 DKK2Q9UBU2 259 aa10.91□□□□□ -0.66
SMARCA4-202ENST00000413806 CDK2AP2O75956 126 aa10.91□□□□□ -0.66
SMARCA4-202ENST00000413806 SSC4DQ8WTU2 575 aa10.91□□□□□ -0.66
SMARCA4-202ENST00000413806 TRAV12-1A0A0B4J245 112 aa10.91□□□□□ -0.66
SMARCA4-202ENST00000413806 ACYP1P07311 99 aa10.91□□□□□ -0.66
SMARCA4-202ENST00000413806 MRPL23Q16540 153 aaKnown RBP10.91□□□□□ -0.66
SMARCA4-202ENST00000413806 C1orf159Q96HA4 380 aa10.91□□□□□ -0.66
SMARCA4-202ENST00000413806 F8WEM9 126 aa10.9□□□□□ -0.66
SMARCA4-202ENST00000413806 KLF5Q13887 457 aaPredicted RBP10.9□□□□□ -0.66
SMARCA4-202ENST00000413806 TPSG1Q9NRR2 321 aa10.9□□□□□ -0.66
SMARCA4-202ENST00000413806 DKK1O94907 266 aa10.9□□□□□ -0.66
SMARCA4-202ENST00000413806 NDUFS7O75251 213 aa10.9□□□□□ -0.67
SMARCA4-202ENST00000413806 IGHV3-53P01767 116 aa10.9□□□□□ -0.67
SMARCA4-202ENST00000413806 RPL35AP18077 110 aaKnown RBP10.9□□□□□ -0.67
SMARCA4-202ENST00000413806 DEFB131AP59861 70 aa10.9□□□□□ -0.67
SMARCA4-202ENST00000413806 LINC01619G3V211 115 aa10.89□□□□□ -0.67
SMARCA4-202ENST00000413806 I3L3M4 83 aa10.89□□□□□ -0.67
SMARCA4-202ENST00000413806 LTAP01374 205 aa10.89□□□□□ -0.67
SMARCA4-202ENST00000413806 FOXI2Q6ZQN5 318 aa10.89□□□□□ -0.67
SMARCA4-202ENST00000413806 HERV-K104P63124 156 aa10.89□□□□□ -0.67
SMARCA4-202ENST00000413806 TDRG1Q3Y452 100 aa10.89□□□□□ -0.67
SMARCA4-202ENST00000413806 TAX1BP3O14907 124 aa10.89□□□□□ -0.67
SMARCA4-202ENST00000413806 C11orf53Q8IXP5 236 aa10.89□□□□□ -0.67
SMARCA4-202ENST00000413806 SCRT2Q9NQ03 307 aa10.89□□□□□ -0.67
SMARCA4-202ENST00000413806 G3V318 75 aa10.89□□□□□ -0.67
SMARCA4-202ENST00000413806 SUMO4Q6EEV6 95 aa10.89□□□□□ -0.67
SMARCA4-202ENST00000413806 WIPF2Q8TF74 440 aaPredicted RBP10.89□□□□□ -0.67
SMARCA4-202ENST00000413806 PCP2Q8IVA1 136 aa10.88□□□□□ -0.67
SMARCA4-202ENST00000413806 ZC2HC1AQ96GY0 325 aa10.88□□□□□ -0.67
SMARCA4-202ENST00000413806 HEATR5AQ86XA9 2040 aa10.88□□□□□ -0.67
SMARCA4-202ENST00000413806 IGHV1OR15-1A0A075B7D0 117 aa10.88□□□□□ -0.67
SMARCA4-202ENST00000413806 TINCRA0A1B0GVN0 87 aa10.88□□□□□ -0.67
SMARCA4-202ENST00000413806 F8VRH5 84 aa10.88□□□□□ -0.67
SMARCA4-202ENST00000413806 CFC1BP0CG36 223 aa10.88□□□□□ -0.67
SMARCA4-202ENST00000413806 CFC1P0CG37 223 aa10.88□□□□□ -0.67
SMARCA4-202ENST00000413806 UBE2E2Q96LR5 201 aa10.88□□□□□ -0.67
SMARCA4-202ENST00000413806 RNF114Q9Y508 228 aa10.88□□□□□ -0.67
SMARCA4-202ENST00000413806 J3QLI3 93 aa10.88□□□□□ -0.67
SMARCA4-202ENST00000413806 SS18Q15532 418 aa10.88□□□□□ -0.67
SMARCA4-202ENST00000413806 PIP4P1Q86T03 277 aa10.88□□□□□ -0.67
SMARCA4-202ENST00000413806 FAM236AA0A1B0GUQ0 79 aa10.88□□□□□ -0.67
SMARCA4-202ENST00000413806 FAM236BA0A1B0GV22 79 aa10.88□□□□□ -0.67
SMARCA4-202ENST00000413806 ATOX1O00244 68 aa10.88□□□□□ -0.67
SMARCA4-202ENST00000413806 H3BUA1 57 aa10.87□□□□□ -0.67
SMARCA4-202ENST00000413806 C5orf47Q569G3 176 aa10.87□□□□□ -0.67
SMARCA4-202ENST00000413806 PYGO2Q9BRQ0 406 aa10.87□□□□□ -0.67
SMARCA4-202ENST00000413806 PLXND1Q9Y4D7 1925 aa10.87□□□□□ -0.67
SMARCA4-202ENST00000413806 KNCNA6PVL3 124 aa10.87□□□□□ -0.67
SMARCA4-202ENST00000413806 SRSF2Q01130 221 aaKnown RBP10.87□□□□□ -0.67
SMARCA4-202ENST00000413806 WFDC2Q14508 124 aa10.87□□□□□ -0.67
SMARCA4-202ENST00000413806 ZNF747Q9BV97 191 aa10.87□□□□□ -0.67
SMARCA4-202ENST00000413806 C3orf56Q8N813 242 aa10.86□□□□□ -0.67
SMARCA4-202ENST00000413806 K7EN84 100 aa10.86□□□□□ -0.67
SMARCA4-202ENST00000413806 NUPR1O60356 82 aa10.86□□□□□ -0.67
SMARCA4-202ENST00000413806 DIAPH2-AS1Q14236 149 aa10.86□□□□□ -0.67
SMARCA4-202ENST00000413806 LYPD6Q86Y78 171 aa10.86□□□□□ -0.67
SMARCA4-202ENST00000413806 TRAV26-2A0A0B4J265 109 aa10.86□□□□□ -0.67
SMARCA4-202ENST00000413806 RPL32P62910 135 aaKnown RBP10.86□□□□□ -0.67
SMARCA4-202ENST00000413806 NDUFA12Q9UI09 145 aa10.86□□□□□ -0.67
SMARCA4-202ENST00000413806 FOXI1Q12951 378 aa10.86□□□□□ -0.67
SMARCA4-202ENST00000413806 SHISA9B4DS77 424 aa10.85□□□□□ -0.67
SMARCA4-202ENST00000413806 CRLF1O75462 422 aa10.85□□□□□ -0.67
SMARCA4-202ENST00000413806 J3QQQ9 107 aa10.85□□□□□ -0.67
SMARCA4-202ENST00000413806 ZNF491Q8N8L2 437 aa10.85□□□□□ -0.67
SMARCA4-202ENST00000413806 MRPL53Q96EL3 112 aaKnown RBP10.85□□□□□ -0.67
SMARCA4-202ENST00000413806 A0A1B0GX51 115 aa10.85□□□□□ -0.67
SMARCA4-202ENST00000413806 SPINK13Q1W4C9 94 aa10.85□□□□□ -0.67
SMARCA4-202ENST00000413806 LHBP01229 141 aa10.85□□□□□ -0.67
SMARCA4-202ENST00000413806 IGFL2Q6UWQ7 119 aa10.85□□□□□ -0.67
SMARCA4-202ENST00000413806 TEN1Q86WV5 123 aa10.85□□□□□ -0.67
SMARCA4-202ENST00000413806 C20orf78Q9BR46 151 aa10.85□□□□□ -0.67
SMARCA4-202ENST00000413806 DSCR8Q96T75 97 aa10.84□□□□□ -0.67
SMARCA4-202ENST00000413806 FGF23Q9GZV9 251 aaPredicted RBP10.84□□□□□ -0.67
SMARCA4-202ENST00000413806 RBAKDNA6NC62 111 aa10.84□□□□□ -0.67
SMARCA4-202ENST00000413806 SDHAF1A6NFY7 115 aa10.84□□□□□ -0.67
SMARCA4-202ENST00000413806 ASPHD1Q5U4P2 390 aa10.84□□□□□ -0.67
SMARCA4-202ENST00000413806 SMIM2Q9BVW6 85 aa10.84□□□□□ -0.67
SMARCA4-202ENST00000413806 PLXNB3Q9ULL4 1909 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms