RNA–Protein interactions for RNA: ENST00000413601.3

LIMS4-201, Transcript of LIM zinc finger domain containing 4, humanhuman

TSL 1 (best) BASIC

Gene LIMS4, Length 1,215 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS4-201ENST00000413601 Q6ZTI0 123 aa10.41□□□□□ -0.74
LIMS4-201ENST00000413601 UBE2DNLQ8IWF7 75 aa10.41□□□□□ -0.74
LIMS4-201ENST00000413601 ZNF680Q8NEM1 530 aa10.41□□□□□ -0.74
LIMS4-201ENST00000413601 IGHV1OR15-1A0A075B7D0 117 aa10.4□□□□□ -0.74
LIMS4-201ENST00000413601 CXorf1O96002 111 aa10.4□□□□□ -0.74
LIMS4-201ENST00000413601 ARL6IP6Q8N6S5 226 aa10.4□□□□□ -0.74
LIMS4-201ENST00000413601 C15orf53Q8NAA6 179 aa10.4□□□□□ -0.74
LIMS4-201ENST00000413601 SUN5Q8TC36 379 aa10.4□□□□□ -0.74
LIMS4-201ENST00000413601 CYTL1Q9NRR1 136 aa10.4□□□□□ -0.74
LIMS4-201ENST00000413601 KLF12Q9Y4X4 402 aa10.4□□□□□ -0.74
LIMS4-201ENST00000413601 LENEPQ9Y5L5 61 aa10.4□□□□□ -0.74
LIMS4-201ENST00000413601 EPPK1P58107 5090 aaKnown RBP10.4□□□□□ -0.75
LIMS4-201ENST00000413601 TRAV8-1A0A0A6YYK1 113 aa10.39□□□□□ -0.75
LIMS4-201ENST00000413601 TAAR5O14804 337 aa10.39□□□□□ -0.75
LIMS4-201ENST00000413601 ZNF726P1Q15940 193 aa10.39□□□□□ -0.75
LIMS4-201ENST00000413601 MUC21Q5SSG8 566 aa10.39□□□□□ -0.75
LIMS4-201ENST00000413601 IQCF2Q8IXL9 164 aa10.39□□□□□ -0.75
LIMS4-201ENST00000413601 TMED6Q8WW62 240 aa10.39□□□□□ -0.75
LIMS4-201ENST00000413601 ST6GAL2Q96JF0 529 aa10.39□□□□□ -0.75
LIMS4-201ENST00000413601 VPS13DQ5THJ4 4388 aa10.38□□□□□ -0.75
LIMS4-201ENST00000413601 TRGV1A0A0A0MS02 117 aa10.38□□□□□ -0.75
LIMS4-201ENST00000413601 NUDT3O95989 172 aa10.38□□□□□ -0.75
LIMS4-201ENST00000413601 TCL1AP56279 114 aa10.38□□□□□ -0.75
LIMS4-201ENST00000413601 OR5I1Q13606 314 aa10.38□□□□□ -0.75
LIMS4-201ENST00000413601 Q6AWC8 147 aa10.38□□□□□ -0.75
LIMS4-201ENST00000413601 TVP23CQ96ET8 276 aa10.38□□□□□ -0.75
LIMS4-201ENST00000413601 SGK494Q96LW2 274 aa10.38□□□□□ -0.75
LIMS4-201ENST00000413601 TMPRSS5Q9H3S3 457 aa10.38□□□□□ -0.75
LIMS4-201ENST00000413601 TMEM167BQ9NRX6 74 aa10.38□□□□□ -0.75
LIMS4-201ENST00000413601 CTXND1A0A1B0GTU2 59 aa10.37□□□□□ -0.75
LIMS4-201ENST00000413601 HOXA5P20719 270 aa10.37□□□□□ -0.75
LIMS4-201ENST00000413601 SUMO1P63165 101 aaKnown RBP10.37□□□□□ -0.75
LIMS4-201ENST00000413601 RNF212Q495C1 297 aa10.37□□□□□ -0.75
LIMS4-201ENST00000413601 AKR1C8PQ5T2L2 129 aa10.37□□□□□ -0.75
LIMS4-201ENST00000413601 IBA57Q5T440 356 aaKnown RBP10.37□□□□□ -0.75
LIMS4-201ENST00000413601 C5orf17Q8NAS9 161 aa10.37□□□□□ -0.75
LIMS4-201ENST00000413601 OR11H4Q8NGC9 324 aa10.37□□□□□ -0.75
LIMS4-201ENST00000413601 ARPC5LQ9BPX5 153 aa10.37□□□□□ -0.75
LIMS4-201ENST00000413601 TRGV2A0A075B6R0 118 aa10.36□□□□□ -0.75
LIMS4-201ENST00000413601 TRAV26-1A0A087WT03 109 aa10.36□□□□□ -0.75
LIMS4-201ENST00000413601 GGTLC3B5MD39 225 aa10.36□□□□□ -0.75
LIMS4-201ENST00000413601 F6UZH7 168 aa10.36□□□□□ -0.75
LIMS4-201ENST00000413601 M0R2N4 97 aa10.36□□□□□ -0.75
LIMS4-201ENST00000413601 SPINK4O60575 86 aa10.36□□□□□ -0.75
LIMS4-201ENST00000413601 TCRAP04437 139 aa10.36□□□□□ -0.75
LIMS4-201ENST00000413601 KCNRGQ8N5I3 272 aa10.36□□□□□ -0.75
LIMS4-201ENST00000413601 TREM1Q9NP99 234 aa10.36□□□□□ -0.75
LIMS4-201ENST00000413601 MUC4Q99102 2169 aa10.35□□□□□ -0.75
LIMS4-201ENST00000413601 IGLV2-18A0A075B6J9 118 aa10.35□□□□□ -0.75
LIMS4-201ENST00000413601 A0A0J9YY99 117 aa10.35□□□□□ -0.75
LIMS4-201ENST00000413601 LCE2BO14633 110 aa10.35□□□□□ -0.75
LIMS4-201ENST00000413601 FGF8P55075 233 aaPredicted RBP10.35□□□□□ -0.75
LIMS4-201ENST00000413601 ZNF415Q09FC8 603 aa10.35□□□□□ -0.75
LIMS4-201ENST00000413601 ZNF345Q14585 488 aa10.35□□□□□ -0.75
LIMS4-201ENST00000413601 TMEM183BQ1AE95 376 aa10.35□□□□□ -0.75
LIMS4-201ENST00000413601 FAM159AQ6UWV7 190 aa10.35□□□□□ -0.75
LIMS4-201ENST00000413601 TMEM183AQ8IXX5 376 aa10.35□□□□□ -0.75
LIMS4-201ENST00000413601 ATG101Q9BSB4 218 aa10.35□□□□□ -0.75
LIMS4-201ENST00000413601 MRPL16Q9NX20 251 aaKnown RBP10.35□□□□□ -0.75
LIMS4-201ENST00000413601 MDFICQ9P1T7 246 aa10.35□□□□□ -0.75
LIMS4-201ENST00000413601 NAGKQ9UJ70 344 aa10.35□□□□□ -0.75
LIMS4-201ENST00000413601 EPDR1Q9UM22 224 aa10.35□□□□□ -0.75
LIMS4-201ENST00000413601 SERTM2A0A1B0GWG4 89 aa10.34□□□□□ -0.75
LIMS4-201ENST00000413601 A0A1W2PRE2 83 aa10.34□□□□□ -0.75
LIMS4-201ENST00000413601 HMSDA8MTL9 139 aa10.34□□□□□ -0.75
LIMS4-201ENST00000413601 K7EQM0 130 aa10.34□□□□□ -0.75
LIMS4-201ENST00000413601 UBE2G2P60604 165 aa10.34□□□□□ -0.75
LIMS4-201ENST00000413601 C18orf15Q96N68 181 aa10.34□□□□□ -0.75
LIMS4-201ENST00000413601 C8orf49Q96NF6 230 aa10.34□□□□□ -0.75
LIMS4-201ENST00000413601 A0A0D9SG52 128 aa10.33□□□□□ -0.76
LIMS4-201ENST00000413601 IGLV2-11P01706 119 aa10.33□□□□□ -0.76
LIMS4-201ENST00000413601 LGALS9BQ3B8N2 356 aa10.33□□□□□ -0.76
LIMS4-201ENST00000413601 NDFIP1Q9BT67 221 aa10.33□□□□□ -0.76
LIMS4-201ENST00000413601 PSG8Q9UQ74 426 aa10.33□□□□□ -0.76
LIMS4-201ENST00000413601 TRGV11A0A075B6L2 103 aa10.32□□□□□ -0.76
LIMS4-201ENST00000413601 TRAV21A0A0B4J279 112 aa10.32□□□□□ -0.76
LIMS4-201ENST00000413601 MAP1LC3B2A6NCE7 125 aa10.32□□□□□ -0.76
LIMS4-201ENST00000413601 GNRH2O43555 120 aa10.32□□□□□ -0.76
LIMS4-201ENST00000413601 IGHV3-53P01767 116 aa10.32□□□□□ -0.76
LIMS4-201ENST00000413601 FLI1Q01543 452 aaPredicted RBP10.32□□□□□ -0.76
LIMS4-201ENST00000413601 TDRG1Q3Y452 100 aa10.32□□□□□ -0.76
LIMS4-201ENST00000413601 PRNTQ86SH4 94 aa10.32□□□□□ -0.76
LIMS4-201ENST00000413601 CYB561D1Q8N8Q1 229 aa10.32□□□□□ -0.76
LIMS4-201ENST00000413601 MAP1LC3BQ9GZQ8 125 aa10.32□□□□□ -0.76
LIMS4-201ENST00000413601 KANTRA0A1W2PQU2 76 aa10.31□□□□□ -0.76
LIMS4-201ENST00000413601 IFNA7P01567 189 aa10.31□□□□□ -0.76
LIMS4-201ENST00000413601 FHITP49789 147 aa10.31□□□□□ -0.76
LIMS4-201ENST00000413601 ZNF80P51504 273 aaPredicted RBP10.31□□□□□ -0.76
LIMS4-201ENST00000413601 CCL18P55774 89 aa10.31□□□□□ -0.76
LIMS4-201ENST00000413601 FAM3BP58499 235 aaPredicted RBP10.31□□□□□ -0.76
LIMS4-201ENST00000413601 TMEM75Q8N9X5 138 aa10.31□□□□□ -0.76
LIMS4-201ENST00000413601 VSIG2Q96IQ7 327 aa10.31□□□□□ -0.76
LIMS4-201ENST00000413601 LINC00479Q96M42 142 aa10.31□□□□□ -0.76
LIMS4-201ENST00000413601 ZNF471Q9BX82 626 aaPredicted RBP10.31□□□□□ -0.76
LIMS4-201ENST00000413601 LINC00588Q9Y4M8 146 aa10.31□□□□□ -0.76
LIMS4-201ENST00000413601 DNAH6Q9C0G6 4158 aa10.31□□□□□ -0.76
LIMS4-201ENST00000413601 FRAS1Q86XX4 4008 aa10.3□□□□□ -0.76
LIMS4-201ENST00000413601 TRAV34A0A0B4J273 112 aa10.3□□□□□ -0.76
LIMS4-201ENST00000413601 FAM74A7A6NL05 159 aa10.3□□□□□ -0.76
LIMS4-201ENST00000413601 H3BNG1 76 aa10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms