RNA–Protein interactions for RNA: ENST00000412899.5

ITGA6-204, Transcript of integrin subunit alpha 6, humanhuman

TSL 1 (best)

Gene ITGA6, Length 970 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA6-204ENST00000412899 OTORQ9NRC9 128 aa13.01□□□□□ -0.33
ITGA6-204ENST00000412899 GPX1P07203 203 aa13□□□□□ -0.33
ITGA6-204ENST00000412899 STAG3L2P0CL84 134 aa13□□□□□ -0.33
ITGA6-204ENST00000412899 STAG3L3P0CL85 134 aa13□□□□□ -0.33
ITGA6-204ENST00000412899 RNASE4P34096 147 aaKnown RBP13□□□□□ -0.33
ITGA6-204ENST00000412899 CCDC28AQ8IWP9 274 aa13□□□□□ -0.33
ITGA6-204ENST00000412899 CMTM2Q8TAZ6 248 aa13□□□□□ -0.33
ITGA6-204ENST00000412899 RNASE8Q8TDE3 154 aaKnown RBP13□□□□□ -0.33
ITGA6-204ENST00000412899 TMEM263Q8WUH6 116 aaKnown RBP13□□□□□ -0.33
ITGA6-204ENST00000412899 Q9H8V8 135 aa13□□□□□ -0.33
ITGA6-204ENST00000412899 ZNF492Q9P255 531 aa13□□□□□ -0.33
ITGA6-204ENST00000412899 C7orf71A4D174 169 aa12.99□□□□□ -0.33
ITGA6-204ENST00000412899 RBAKDNA6NC62 111 aa12.99□□□□□ -0.33
ITGA6-204ENST00000412899 KLLNB2CW77 178 aa12.99□□□□□ -0.33
ITGA6-204ENST00000412899 DIRC3C9JPN6 131 aa12.99□□□□□ -0.33
ITGA6-204ENST00000412899 ZNF138P52744 262 aa12.99□□□□□ -0.33
ITGA6-204ENST00000412899 CD300CQ08708 224 aa12.99□□□□□ -0.33
ITGA6-204ENST00000412899 CYTL1Q9NRR1 136 aa12.99□□□□□ -0.33
ITGA6-204ENST00000412899 RPH3ALQ9UNE2 315 aa12.99□□□□□ -0.33
ITGA6-204ENST00000412899 CXorf1O96002 111 aa12.98□□□□□ -0.33
ITGA6-204ENST00000412899 NMBP08949 121 aa12.98□□□□□ -0.33
ITGA6-204ENST00000412899 CRISP2P16562 243 aa12.98□□□□□ -0.33
ITGA6-204ENST00000412899 GCHFRP30047 84 aa12.98□□□□□ -0.33
ITGA6-204ENST00000412899 BTN1A1Q13410 526 aa12.98□□□□□ -0.33
ITGA6-204ENST00000412899 KCNRGQ8N5I3 272 aa12.98□□□□□ -0.33
ITGA6-204ENST00000412899 OR11H4Q8NGC9 324 aa12.98□□□□□ -0.33
ITGA6-204ENST00000412899 Q8TAT8 98 aa12.98□□□□□ -0.33
ITGA6-204ENST00000412899 RYR1P21817 5038 aa12.98□□□□□ -0.33
ITGA6-204ENST00000412899 TRAV26-1A0A087WT03 109 aa12.97□□□□□ -0.33
ITGA6-204ENST00000412899 HMSDA8MTL9 139 aa12.97□□□□□ -0.33
ITGA6-204ENST00000412899 ZNF345Q14585 488 aa12.97□□□□□ -0.33
ITGA6-204ENST00000412899 TTC32Q5I0X7 151 aa12.97□□□□□ -0.33
ITGA6-204ENST00000412899 AKR1C8PQ5T2L2 129 aa12.97□□□□□ -0.33
ITGA6-204ENST00000412899 ZFAND2AQ8N6M9 145 aa12.97□□□□□ -0.33
ITGA6-204ENST00000412899 ARPC5LQ9BPX5 153 aa12.97□□□□□ -0.33
ITGA6-204ENST00000412899 PYGO2Q9BRQ0 406 aa12.97□□□□□ -0.33
ITGA6-204ENST00000412899 A0A0J9YY99 117 aa12.96□□□□□ -0.33
ITGA6-204ENST00000412899 ZNF324O75467 553 aaPredicted RBP12.96□□□□□ -0.33
ITGA6-204ENST00000412899 SPATA12Q7Z6I5 190 aa12.96□□□□□ -0.33
ITGA6-204ENST00000412899 IQCF2Q8IXL9 164 aa12.96□□□□□ -0.33
ITGA6-204ENST00000412899 TMEM167BQ9NRX6 74 aa12.96□□□□□ -0.33
ITGA6-204ENST00000412899 A0A0D9SG52 128 aa12.95□□□□□ -0.34
ITGA6-204ENST00000412899 TRBV7-9A0A0J9YWB2 115 aa12.95□□□□□ -0.34
ITGA6-204ENST00000412899 GAGE12BA1L429 117 aa12.95□□□□□ -0.34
ITGA6-204ENST00000412899 GAGE7O76087 117 aa12.95□□□□□ -0.34
ITGA6-204ENST00000412899 GAGE12FP0CL80 117 aa12.95□□□□□ -0.34
ITGA6-204ENST00000412899 GAGE12GP0CL81 117 aa12.95□□□□□ -0.34
ITGA6-204ENST00000412899 GAGE12IP0CL82 117 aa12.95□□□□□ -0.34
ITGA6-204ENST00000412899 GOLT1AQ6ZVE7 132 aa12.95□□□□□ -0.34
ITGA6-204ENST00000412899 SUN5Q8TC36 379 aa12.95□□□□□ -0.34
ITGA6-204ENST00000412899 ABCA13Q86UQ4 5058 aa12.94□□□□□ -0.34
ITGA6-204ENST00000412899 CTXND1A0A1B0GTU2 59 aa12.94□□□□□ -0.34
ITGA6-204ENST00000412899 SNURFLB1AK76 121 aa12.94□□□□□ -0.34
ITGA6-204ENST00000412899 GNG5P63218 68 aa12.94□□□□□ -0.34
ITGA6-204ENST00000412899 ZNF726P1Q15940 193 aa12.94□□□□□ -0.34
ITGA6-204ENST00000412899 PRR9Q5T870 116 aa12.94□□□□□ -0.34
ITGA6-204ENST00000412899 ARL6IP6Q8N6S5 226 aa12.94□□□□□ -0.34
ITGA6-204ENST00000412899 ST6GAL2Q96JF0 529 aa12.94□□□□□ -0.34
ITGA6-204ENST00000412899 KANTRA0A1W2PQU2 76 aa12.93□□□□□ -0.34
ITGA6-204ENST00000412899 Q8N1X5 172 aa12.93□□□□□ -0.34
ITGA6-204ENST00000412899 LINC00612Q8N6U2 182 aa12.93□□□□□ -0.34
ITGA6-204ENST00000412899 KRTAP1-5Q9BYS1 174 aa12.93□□□□□ -0.34
ITGA6-204ENST00000412899 LENEPQ9Y5L5 61 aa12.93□□□□□ -0.34
ITGA6-204ENST00000412899 RGS13O14921 159 aa12.92□□□□□ -0.34
ITGA6-204ENST00000412899 HOXA5P20719 270 aa12.92□□□□□ -0.34
ITGA6-204ENST00000412899 SUMO1P63165 101 aaKnown RBP12.92□□□□□ -0.34
ITGA6-204ENST00000412899 ESRGQ1W209 222 aa12.92□□□□□ -0.34
ITGA6-204ENST00000412899 Q6ZNX1 250 aa12.92□□□□□ -0.34
ITGA6-204ENST00000412899 Q6ZQT7 251 aa12.92□□□□□ -0.34
ITGA6-204ENST00000412899 EIF4E3Q8N5X7 224 aaKnown RBP12.92□□□□□ -0.34
ITGA6-204ENST00000412899 C5orf17Q8NAS9 161 aa12.92□□□□□ -0.34
ITGA6-204ENST00000412899 TMED6Q8WW62 240 aa12.92□□□□□ -0.34
ITGA6-204ENST00000412899 LINC00467Q9BRT7 94 aa12.92□□□□□ -0.34
ITGA6-204ENST00000412899 ZNF471Q9BX82 626 aaPredicted RBP12.92□□□□□ -0.34
ITGA6-204ENST00000412899 BCL2L11O43521 198 aa12.91□□□□□ -0.34
ITGA6-204ENST00000412899 ZNF680Q8NEM1 530 aa12.91□□□□□ -0.34
ITGA6-204ENST00000412899 UPK3BQ9BT76 320 aa12.91□□□□□ -0.34
ITGA6-204ENST00000412899 TMPRSS5Q9H3S3 457 aa12.91□□□□□ -0.34
ITGA6-204ENST00000412899 SCRT2Q9NQ03 307 aa12.91□□□□□ -0.34
ITGA6-204ENST00000412899 GSN-AS1Q9NRJ2 163 aa12.91□□□□□ -0.34
ITGA6-204ENST00000412899 IGHV1OR15-1A0A075B7D0 117 aa12.9□□□□□ -0.34
ITGA6-204ENST00000412899 TRAV8-1A0A0A6YYK1 113 aa12.9□□□□□ -0.34
ITGA6-204ENST00000412899 A0A1W2PPQ1 181 aa12.9□□□□□ -0.34
ITGA6-204ENST00000412899 H3BNG1 76 aa12.9□□□□□ -0.34
ITGA6-204ENST00000412899 PFDN1O60925 122 aa12.9□□□□□ -0.34
ITGA6-204ENST00000412899 FGF8P55075 233 aaPredicted RBP12.9□□□□□ -0.34
ITGA6-204ENST00000412899 ANXA2RQ3ZCQ2 193 aa12.9□□□□□ -0.34
ITGA6-204ENST00000412899 MRPS16Q9Y3D3 137 aaKnown RBP12.9□□□□□ -0.34
ITGA6-204ENST00000412899 SERTM2A0A1B0GWG4 89 aa12.89□□□□□ -0.35
ITGA6-204ENST00000412899 GGTLC3B5MD39 225 aa12.89□□□□□ -0.35
ITGA6-204ENST00000412899 K7EQM0 130 aa12.89□□□□□ -0.35
ITGA6-204ENST00000412899 TCRAP04437 139 aa12.89□□□□□ -0.35
ITGA6-204ENST00000412899 SEC11BP0C7V7 166 aa12.89□□□□□ -0.35
ITGA6-204ENST00000412899 DAZ2Q13117 558 aaKnown RBP12.89□□□□□ -0.35
ITGA6-204ENST00000412899 TMUB2Q71RG4 321 aa12.89□□□□□ -0.35
ITGA6-204ENST00000412899 SGK494Q96LW2 274 aa12.89□□□□□ -0.35
ITGA6-204ENST00000412899 TP53TG3Q9ULZ0 132 aa12.89□□□□□ -0.35
ITGA6-204ENST00000412899 EPDR1Q9UM22 224 aa12.89□□□□□ -0.35
ITGA6-204ENST00000412899 A0A1W2PRE2 83 aa12.88□□□□□ -0.35
ITGA6-204ENST00000412899 MAP1LC3B2A6NCE7 125 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms