RNA–Protein interactions for RNA: ENST00000412685.6

HCG18-233, Transcript of HLA complex group 18, humanhuman

TSL 2 BASIC

Gene HCG18, Length 2,552 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCG18-233ENST00000412685 CNFNQ9BYD5 112 aa12.59□□□□□ -0.39
HCG18-233ENST00000412685 HSPB8Q9UJY1 196 aa12.59□□□□□ -0.39
HCG18-233ENST00000412685 IFI27P40305 119 aaPredicted RBP12.59□□□□□ -0.39
HCG18-233ENST00000412685 C9orf47Q6ZRZ4 202 aa12.59□□□□□ -0.39
HCG18-233ENST00000412685 OR4C46A6NHA9 309 aa12.58□□□□□ -0.4
HCG18-233ENST00000412685 SLC25A16P16260 332 aa12.58□□□□□ -0.4
HCG18-233ENST00000412685 C9orf139Q6ZV77 190 aa12.58□□□□□ -0.4
HCG18-233ENST00000412685 MAP1LC3CQ9BXW4 147 aa12.58□□□□□ -0.4
HCG18-233ENST00000412685 CENPEQ02224 2701 aa12.58□□□□□ -0.4
HCG18-233ENST00000412685 C20orf202A1L168 122 aa12.58□□□□□ -0.4
HCG18-233ENST00000412685 HIST1H1AQ02539 215 aaPredicted RBP12.58□□□□□ -0.4
HCG18-233ENST00000412685 Q6ZN92 141 aa12.58□□□□□ -0.4
HCG18-233ENST00000412685 OR4X2Q8NGF9 303 aa12.58□□□□□ -0.4
HCG18-233ENST00000412685 SIGLEC8Q9NYZ4 499 aa12.58□□□□□ -0.4
HCG18-233ENST00000412685 MSRB1Q9NZV6 116 aa12.58□□□□□ -0.4
HCG18-233ENST00000412685 ANKRD17O75179 2603 aaKnown RBP12.58□□□□□ -0.4
HCG18-233ENST00000412685 IGKV3D-20A0A0C4DH25 116 aa12.57□□□□□ -0.4
HCG18-233ENST00000412685 LOC389332A0A1B0GUA5 103 aa12.57□□□□□ -0.4
HCG18-233ENST00000412685 IGLV1-40P01703 118 aa12.57□□□□□ -0.4
HCG18-233ENST00000412685 IGLL1P15814 213 aa12.57□□□□□ -0.4
HCG18-233ENST00000412685 LCNL1Q6ZST4 164 aa12.57□□□□□ -0.4
HCG18-233ENST00000412685 TMEM191AQ9H0A3 160 aa12.57□□□□□ -0.4
HCG18-233ENST00000412685 C11orf21Q9P2W6 132 aa12.57□□□□□ -0.4
HCG18-233ENST00000412685 TIMM8BQ9Y5J9 83 aaPredicted RBP12.57□□□□□ -0.4
HCG18-233ENST00000412685 CSMD2Q7Z408 3487 aa12.57□□□□□ -0.4
HCG18-233ENST00000412685 POLQO75417 2590 aa12.57□□□□□ -0.4
HCG18-233ENST00000412685 CKS2P33552 79 aa12.56□□□□□ -0.4
HCG18-233ENST00000412685 FAM106AQ4KMX7 169 aa12.56□□□□□ -0.4
HCG18-233ENST00000412685 GPHB5Q86YW7 130 aa12.56□□□□□ -0.4
HCG18-233ENST00000412685 OR10AG1Q8NH19 301 aa12.56□□□□□ -0.4
HCG18-233ENST00000412685 C20orf173Q96LM9 149 aa12.56□□□□□ -0.4
HCG18-233ENST00000412685 NPFFR1Q9GZQ6 430 aa12.56□□□□□ -0.4
HCG18-233ENST00000412685 PET117Q6UWS5 81 aa12.56□□□□□ -0.4
HCG18-233ENST00000412685 LINC01356Q8N9X3 169 aa12.56□□□□□ -0.4
HCG18-233ENST00000412685 ZNF738Q8NE65 137 aa12.56□□□□□ -0.4
HCG18-233ENST00000412685 FBN2P35556 2912 aa12.56□□□□□ -0.4
HCG18-233ENST00000412685 A0A0G2JLM5 398 aa12.55□□□□□ -0.4
HCG18-233ENST00000412685 SMKR1H3BMG3 65 aa12.55□□□□□ -0.4
HCG18-233ENST00000412685 HNRNPA3P51991 378 aaKnown RBP12.55□□□□□ -0.4
HCG18-233ENST00000412685 CFHR3Q02985 330 aa12.55□□□□□ -0.4
HCG18-233ENST00000412685 STPG4Q8N801 248 aa12.55□□□□□ -0.4
HCG18-233ENST00000412685 LOXL1Q08397 574 aaPredicted RBP12.55□□□□□ -0.4
HCG18-233ENST00000412685 BBC3Q96PG8 261 aaPredicted RBP12.55□□□□□ -0.4
HCG18-233ENST00000412685 ZNF747Q9BV97 191 aa12.55□□□□□ -0.4
HCG18-233ENST00000412685 NCR2O95944 276 aa12.54□□□□□ -0.4
HCG18-233ENST00000412685 COX6B1P14854 86 aa12.54□□□□□ -0.4
HCG18-233ENST00000412685 A0A096LNJ9 63 aa12.54□□□□□ -0.4
HCG18-233ENST00000412685 A0A096LNT2 108 aa12.54□□□□□ -0.4
HCG18-233ENST00000412685 H0Y8G0 127 aa12.54□□□□□ -0.4
HCG18-233ENST00000412685 NPYP01303 97 aa12.54□□□□□ -0.4
HCG18-233ENST00000412685 IGHV4-59P01825 116 aa12.54□□□□□ -0.4
HCG18-233ENST00000412685 FOXE3Q13461 319 aa12.54□□□□□ -0.4
HCG18-233ENST00000412685 RNF185Q96GF1 192 aa12.54□□□□□ -0.4
HCG18-233ENST00000412685 UBR5O95071 2799 aaPredicted RBP12.54□□□□□ -0.4
HCG18-233ENST00000412685 ZANQ9Y493 2812 aa12.53□□□□□ -0.4
HCG18-233ENST00000412685 SOCS3O14543 225 aa12.53□□□□□ -0.4
HCG18-233ENST00000412685 DEFB112Q30KQ8 113 aa12.53□□□□□ -0.4
HCG18-233ENST00000412685 MCRIP2Q9BUT9 160 aaKnown RBP12.53□□□□□ -0.4
HCG18-233ENST00000412685 TSPOP30536 169 aa12.53□□□□□ -0.4
HCG18-233ENST00000412685 TMEM95Q3KNT9 176 aa12.53□□□□□ -0.4
HCG18-233ENST00000412685 PRSS57Q6UWY2 283 aa12.53□□□□□ -0.4
HCG18-233ENST00000412685 LENEPQ9Y5L5 61 aa12.53□□□□□ -0.4
HCG18-233ENST00000412685 Q6ZQT7 251 aa12.52□□□□□ -0.4
HCG18-233ENST00000412685 RPL11P62913 178 aaKnown RBP12.52□□□□□ -0.41
HCG18-233ENST00000412685 LINC01545Q5VT33 79 aa12.52□□□□□ -0.41
HCG18-233ENST00000412685 ST20Q9HBF5 79 aa12.52□□□□□ -0.41
HCG18-233ENST00000412685 ZNF580Q9UK33 172 aa12.52□□□□□ -0.41
HCG18-233ENST00000412685 hDV102S1A0JD36 115 aa12.51□□□□□ -0.41
HCG18-233ENST00000412685 PPBPP02775 128 aa12.51□□□□□ -0.41
HCG18-233ENST00000412685 TM4SF20Q53R12 229 aa12.51□□□□□ -0.41
HCG18-233ENST00000412685 PRR9Q5T870 116 aa12.51□□□□□ -0.41
HCG18-233ENST00000412685 MAPK1IP1LQ8NDC0 245 aa12.51□□□□□ -0.41
HCG18-233ENST00000412685 RHPN1-AS1Q9BWJ2 59 aa12.51□□□□□ -0.41
HCG18-233ENST00000412685 DAZ1Q9NQZ3 744 aaKnown RBP12.51□□□□□ -0.41
HCG18-233ENST00000412685 PTPN13Q12923 2485 aa12.51□□□□□ -0.41
HCG18-233ENST00000412685 IGHV7-4-1A0A0J9YVY3 117 aa12.51□□□□□ -0.41
HCG18-233ENST00000412685 A1L4Q6 167 aa12.51□□□□□ -0.41
HCG18-233ENST00000412685 TGFAP01135 160 aa12.51□□□□□ -0.41
HCG18-233ENST00000412685 Q6ZVH6 145 aa12.51□□□□□ -0.41
HCG18-233ENST00000412685 OR10J6PQ8NGY7 276 aa12.51□□□□□ -0.41
HCG18-233ENST00000412685 LINC00477Q96M19 166 aa12.51□□□□□ -0.41
HCG18-233ENST00000412685 LAMTOR2Q9Y2Q5 125 aa12.51□□□□□ -0.41
HCG18-233ENST00000412685 J3QLI3 93 aa12.5□□□□□ -0.41
HCG18-233ENST00000412685 OVOL1O14753 267 aa12.5□□□□□ -0.41
HCG18-233ENST00000412685 SRSF1Q07955 248 aaKnown RBP eCLIP12.5□□□□□ -0.413e-10■■■□□ 17.2
HCG18-233ENST00000412685 MRPS16Q9Y3D3 137 aaKnown RBP12.5□□□□□ -0.41
HCG18-233ENST00000412685 CCL25O15444 150 aa12.5□□□□□ -0.41
HCG18-233ENST00000412685 RNASE8Q8TDE3 154 aaKnown RBP12.5□□□□□ -0.41
HCG18-233ENST00000412685 PMCHL2Q9BQD1 86 aa12.5□□□□□ -0.41
HCG18-233ENST00000412685 PEF1Q9UBV8 284 aaKnown RBP12.5□□□□□ -0.41
HCG18-233ENST00000412685 GAS8-AS1O95177 125 aa12.49□□□□□ -0.41
HCG18-233ENST00000412685 DEFB1P60022 68 aa12.49□□□□□ -0.41
HCG18-233ENST00000412685 IGKV3-7A0A075B6H7 116 aa12.49□□□□□ -0.41
HCG18-233ENST00000412685 HSBP1L1C9JCN9 74 aa12.49□□□□□ -0.41
HCG18-233ENST00000412685 PSMB8P28062 276 aa12.49□□□□□ -0.41
HCG18-233ENST00000412685 PTTG1IPP53801 180 aa12.49□□□□□ -0.41
HCG18-233ENST00000412685 ZNF843Q8N446 348 aa12.49□□□□□ -0.41
HCG18-233ENST00000412685 ZFAND2AQ8N6M9 145 aa12.49□□□□□ -0.41
HCG18-233ENST00000412685 MAP1LC3AQ9H492 121 aa12.49□□□□□ -0.41
HCG18-233ENST00000412685 HBDP02042 147 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms