RNA–Protein interactions for RNA: ENST00000410731.1

RNU4-55P-201, Transcript of RNA, U4 small nuclear 55, pseudogene, humanhuman

BASIC

Gene RNU4-55P, Length 137 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-55P-201ENST00000410731 SPRR1AP35321 89 aa-1□□□□□ -2.57
RNU4-55P-201ENST00000410731 NEDD8Q15843 81 aa-1□□□□□ -2.57
RNU4-55P-201ENST00000410731 SREK1IP1Q8N9Q2 155 aaPredicted RBP-1□□□□□ -2.57
RNU4-55P-201ENST00000410731 OR10X1Q8NGY0 326 aa-1□□□□□ -2.57
RNU4-55P-201ENST00000410731 BPESC1Q9GZL8 116 aa-1□□□□□ -2.57
RNU4-55P-201ENST00000410731 BIN3Q9NQY0 253 aa-1□□□□□ -2.57
RNU4-55P-201ENST00000410731 MYO18BQ8IUG5 2567 aa-1□□□□□ -2.57
RNU4-55P-201ENST00000410731 ZFYVE9O95405 1425 aa-1□□□□□ -2.57
RNU4-55P-201ENST00000410731 NISCHQ9Y2I1 1504 aa-1□□□□□ -2.57
RNU4-55P-201ENST00000410731 LAMB1P07942 1786 aa-1.01□□□□□ -2.57
RNU4-55P-201ENST00000410731 TRAV5A0A0B4J249 113 aa-1.01□□□□□ -2.57
RNU4-55P-201ENST00000410731 TMEM114B3SHH9 223 aa-1.01□□□□□ -2.57
RNU4-55P-201ENST00000410731 HMGB3O15347 200 aaKnown RBP-1.01□□□□□ -2.57
RNU4-55P-201ENST00000410731 SPRR2AP35326 72 aa-1.01□□□□□ -2.57
RNU4-55P-201ENST00000410731 INSL3P51460 131 aa-1.01□□□□□ -2.57
RNU4-55P-201ENST00000410731 KRTAP6-2Q3LI66 62 aa-1.01□□□□□ -2.57
RNU4-55P-201ENST00000410731 VMA21Q3ZAQ7 101 aa-1.01□□□□□ -2.57
RNU4-55P-201ENST00000410731 CSAG1Q6PB30 78 aa-1.01□□□□□ -2.57
RNU4-55P-201ENST00000410731 CCL4L1Q8NHW4 92 aa-1.01□□□□□ -2.57
RNU4-55P-201ENST00000410731 AP1S3Q96PC3 154 aa-1.01□□□□□ -2.57
RNU4-55P-201ENST00000410731 ENY2Q9NPA8 101 aa-1.01□□□□□ -2.57
RNU4-55P-201ENST00000410731 PRO0255Q9UI72 69 aa-1.01□□□□□ -2.57
RNU4-55P-201ENST00000410731 A0A087WTM6 91 aa-1.02□□□□□ -2.57
RNU4-55P-201ENST00000410731 GVQW2A0A096LPI5 108 aaPredicted RBP-1.02□□□□□ -2.57
RNU4-55P-201ENST00000410731 HIGD1CA8MV81 97 aa-1.02□□□□□ -2.57
RNU4-55P-201ENST00000410731 K7ERJ3 54 aa-1.02□□□□□ -2.57
RNU4-55P-201ENST00000410731 ADCY9O60503 1353 aa-1.02□□□□□ -2.57
RNU4-55P-201ENST00000410731 HIST1H2BKO60814 126 aa-1.02□□□□□ -2.57
RNU4-55P-201ENST00000410731 DNAJC13O75165 2243 aa-1.02□□□□□ -2.57
RNU4-55P-201ENST00000410731 HIST1H2BJP06899 126 aa-1.02□□□□□ -2.57
RNU4-55P-201ENST00000410731 ANK1P16157 1881 aa-1.02□□□□□ -2.57
RNU4-55P-201ENST00000410731 TAF1AQ15573 450 aaPredicted RBP-1.02□□□□□ -2.57
RNU4-55P-201ENST00000410731 HACD4Q5VWC8 232 aa-1.02□□□□□ -2.57
RNU4-55P-201ENST00000410731 ANKHD1Q8IWZ3 2542 aaKnown RBP-1.02□□□□□ -2.57
RNU4-55P-201ENST00000410731 IFT20Q8IY31 132 aa-1.02□□□□□ -2.57
RNU4-55P-201ENST00000410731 FAM216BQ8N7L0 139 aa-1.02□□□□□ -2.57
RNU4-55P-201ENST00000410731 FAT3Q8TDW7 4589 aa-1.03□□□□□ -2.57
RNU4-55P-201ENST00000410731 UBR2Q8IWV8 1755 aa-1.03□□□□□ -2.57
RNU4-55P-201ENST00000410731 FRMPD1Q5SYB0 1578 aa-1.03□□□□□ -2.57
RNU4-55P-201ENST00000410731 LOC730098B7Z3J9 87 aa-1.03□□□□□ -2.57
RNU4-55P-201ENST00000410731 K7EQZ3 153 aa-1.03□□□□□ -2.57
RNU4-55P-201ENST00000410731 SPRR2EP22531 72 aa-1.03□□□□□ -2.57
RNU4-55P-201ENST00000410731 PHBP35232 272 aa-1.03□□□□□ -2.57
RNU4-55P-201ENST00000410731 HSPE1P61604 102 aaKnown RBP-1.03□□□□□ -2.57
RNU4-55P-201ENST00000410731 LIN52Q52LA3 116 aa-1.03□□□□□ -2.57
RNU4-55P-201ENST00000410731 MRPL36Q9P0J6 103 aaKnown RBP-1.03□□□□□ -2.57
RNU4-55P-201ENST00000410731 FAM32AQ9Y421 112 aaKnown RBP-1.03□□□□□ -2.57
RNU4-55P-201ENST00000410731 SPG11Q96JI7 2443 aa-1.03□□□□□ -2.57
RNU4-55P-201ENST00000410731 VIRMAQ69YN4 1812 aaKnown RBP-1.03□□□□□ -2.57
RNU4-55P-201ENST00000410731 RREB1Q92766 1687 aa-1.04□□□□□ -2.58
RNU4-55P-201ENST00000410731 BLMP54132 1417 aaPredicted RBP-1.04□□□□□ -2.58
RNU4-55P-201ENST00000410731 CPDO75976 1380 aa-1.04□□□□□ -2.58
RNU4-55P-201ENST00000410731 DNAH9Q9NYC9 4486 aa-1.04□□□□□ -2.58
RNU4-55P-201ENST00000410731 C9JAW5 83 aa-1.04□□□□□ -2.58
RNU4-55P-201ENST00000410731 BANF1O75531 89 aa-1.04□□□□□ -2.58
RNU4-55P-201ENST00000410731 IGF2P01344 180 aa-1.04□□□□□ -2.58
RNU4-55P-201ENST00000410731 C1QBP02746 253 aa-1.04□□□□□ -2.58
RNU4-55P-201ENST00000410731 CYBAP13498 195 aa-1.04□□□□□ -2.58
RNU4-55P-201ENST00000410731 PTRHD1Q6GMV3 140 aaKnown RBP-1.04□□□□□ -2.58
RNU4-55P-201ENST00000410731 SMIM11BQ8TCY0 68 aa-1.04□□□□□ -2.58
RNU4-55P-201ENST00000410731 CNFNQ9BYD5 112 aa-1.04□□□□□ -2.58
RNU4-55P-201ENST00000410731 DNAH2Q9P225 4427 aa-1.04□□□□□ -2.58
RNU4-55P-201ENST00000410731 TACC2O95359 2948 aa-1.04□□□□□ -2.58
RNU4-55P-201ENST00000410731 SSC5DA1L4H1 1573 aa-1.04□□□□□ -2.58
RNU4-55P-201ENST00000410731 AKAP9Q99996 3911 aa-1.05□□□□□ -2.58
RNU4-55P-201ENST00000410731 KIAA1549LQ6ZVL6 1849 aa-1.05□□□□□ -2.58
RNU4-55P-201ENST00000410731 CUBNO60494 3623 aa-1.05□□□□□ -2.58
RNU4-55P-201ENST00000410731 DLEC1Q9Y238 1755 aa-1.05□□□□□ -2.58
RNU4-55P-201ENST00000410731 ZNF815PA8K554 130 aa-1.05□□□□□ -2.58
RNU4-55P-201ENST00000410731 CST7O76096 145 aa-1.05□□□□□ -2.58
RNU4-55P-201ENST00000410731 TRGC2P03986 189 aa-1.05□□□□□ -2.58
RNU4-55P-201ENST00000410731 APODP05090 189 aa-1.05□□□□□ -2.58
RNU4-55P-201ENST00000410731 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa-1.05□□□□□ -2.58
RNU4-55P-201ENST00000410731 C3orf62Q6ZUJ4 267 aa-1.05□□□□□ -2.58
RNU4-55P-201ENST00000410731 SSBP3-AS1Q7Z2R9 100 aa-1.05□□□□□ -2.58
RNU4-55P-201ENST00000410731 EFCAB11Q9BUY7 163 aa-1.05□□□□□ -2.58
RNU4-55P-201ENST00000410731 CDK12Q9NYV4 1490 aaPredicted RBP-1.05□□□□□ -2.58
RNU4-55P-201ENST00000410731 A0A0D9SFI3 127 aa-1.06□□□□□ -2.58
RNU4-55P-201ENST00000410731 IFNA14P01570 189 aa-1.06□□□□□ -2.58
RNU4-55P-201ENST00000410731 GLRXP35754 106 aa-1.06□□□□□ -2.58
RNU4-55P-201ENST00000410731 NCALDP61601 193 aa-1.06□□□□□ -2.58
RNU4-55P-201ENST00000410731 CCL7P80098 99 aa-1.06□□□□□ -2.58
RNU4-55P-201ENST00000410731 EMX2Q04743 252 aa-1.06□□□□□ -2.58
RNU4-55P-201ENST00000410731 SPA17Q15506 151 aa-1.06□□□□□ -2.58
RNU4-55P-201ENST00000410731 MSMO1Q15800 293 aa-1.06□□□□□ -2.58
RNU4-55P-201ENST00000410731 KLK9Q2XQG4 91 aa-1.06□□□□□ -2.58
RNU4-55P-201ENST00000410731 IZUMO2Q6UXV1 221 aa-1.06□□□□□ -2.58
RNU4-55P-201ENST00000410731 PHF5AQ7RTV0 110 aaKnown RBP-1.06□□□□□ -2.58
RNU4-55P-201ENST00000410731 OR8J2Q8NGG1 315 aa-1.06□□□□□ -2.58
RNU4-55P-201ENST00000410731 PRAP1Q96NZ9 151 aa-1.06□□□□□ -2.58
RNU4-55P-201ENST00000410731 OR2J1Q9GZK6 312 aa-1.06□□□□□ -2.58
RNU4-55P-201ENST00000410731 COMMD3Q9UBI1 195 aa-1.06□□□□□ -2.58
RNU4-55P-201ENST00000410731 TPRKBQ9Y3C4 175 aa-1.06□□□□□ -2.58
RNU4-55P-201ENST00000410731 BCL9LQ86UU0 1499 aa-1.06□□□□□ -2.58
RNU4-55P-201ENST00000410731 ADGRL3Q9HAR2 1447 aa-1.06□□□□□ -2.58
RNU4-55P-201ENST00000410731 TRAV17A0A0B4J275 112 aa-1.07□□□□□ -2.58
RNU4-55P-201ENST00000410731 TPST1O60507 370 aa-1.07□□□□□ -2.58
RNU4-55P-201ENST00000410731 SCGB2B2Q4G0G5 96 aa-1.07□□□□□ -2.58
RNU4-55P-201ENST00000410731 C1orf140Q5VVS0 124 aa-1.07□□□□□ -2.58
RNU4-55P-201ENST00000410731 UBE2DNLQ8IWF7 75 aa-1.07□□□□□ -2.58
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms