RNA–Protein interactions for RNA: ENST00000409672.5

SCN9A-203, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

APPRIS P2 TSL 5 BASIC

Gene SCN9A, Length 9,768 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-203ENST00000409672 SPATA25Q9BR10 227 aa6.72□□□□□ -1.33
SCN9A-203ENST00000409672 NDUFAF3Q9BU61 184 aa6.72□□□□□ -1.33
SCN9A-203ENST00000409672 ID3Q02535 119 aa6.72□□□□□ -1.33
SCN9A-203ENST00000409672 K7EMI3 77 aa6.71□□□□□ -1.33
SCN9A-203ENST00000409672 A0A096LNI7 61 aa6.71□□□□□ -1.33
SCN9A-203ENST00000409672 Q6P435 159 aa6.71□□□□□ -1.33
SCN9A-203ENST00000409672 LAMTOR2Q9Y2Q5 125 aa6.71□□□□□ -1.33
SCN9A-203ENST00000409672 A0A1B0GW64 132 aa6.71□□□□□ -1.33
SCN9A-203ENST00000409672 CSRP3P50461 194 aa6.71□□□□□ -1.33
SCN9A-203ENST00000409672 LINC00114Q6XXX2 140 aa6.71□□□□□ -1.33
SCN9A-203ENST00000409672 CITED1Q99966 193 aa6.71□□□□□ -1.33
SCN9A-203ENST00000409672 OSTCQ9NRP0 149 aa6.71□□□□□ -1.33
SCN9A-203ENST00000409672 IGKV2-24A0A0C4DH68 120 aa6.71□□□□□ -1.34
SCN9A-203ENST00000409672 IGHG4P01861 327 aa6.71□□□□□ -1.34
SCN9A-203ENST00000409672 MPV17L2Q567V2 206 aa6.71□□□□□ -1.34
SCN9A-203ENST00000409672 DENND4CQ5VZ89 1909 aa6.71□□□□□ -1.34
SCN9A-203ENST00000409672 TRAV16A0A0A6YYK6 109 aaPredicted RBP6.71□□□□□ -1.34
SCN9A-203ENST00000409672 GNB1LQ9BYB4 327 aa6.71□□□□□ -1.34
SCN9A-203ENST00000409672 EXPH5Q8NEV8 1989 aa6.71□□□□□ -1.34
SCN9A-203ENST00000409672 IGLV2-18A0A075B6J9 118 aa6.71□□□□□ -1.34
SCN9A-203ENST00000409672 ETDCA0A1B0GVM5 59 aa6.71□□□□□ -1.34
SCN9A-203ENST00000409672 CHCHD1Q96BP2 118 aaKnown RBP6.71□□□□□ -1.34
SCN9A-203ENST00000409672 TRACP01848 142 aa6.71□□□□□ -1.34
SCN9A-203ENST00000409672 VPREB3Q9UKI3 123 aa6.71□□□□□ -1.34
SCN9A-203ENST00000409672 LAIR2Q6ISS4 152 aa6.7□□□□□ -1.34
SCN9A-203ENST00000409672 SOCS3O14543 225 aa6.7□□□□□ -1.34
SCN9A-203ENST00000409672 ATRAIDQ6UW56 229 aa6.7□□□□□ -1.34
SCN9A-203ENST00000409672 PRR14LQ5THK1 2151 aa6.7□□□□□ -1.34
SCN9A-203ENST00000409672 OOSP1A8MZH6 123 aa6.7□□□□□ -1.34
SCN9A-203ENST00000409672 RHODO00212 210 aa6.7□□□□□ -1.34
SCN9A-203ENST00000409672 NCR3O14931 201 aa6.7□□□□□ -1.34
SCN9A-203ENST00000409672 IGHV1-24A0A0C4DH33 117 aa6.7□□□□□ -1.34
SCN9A-203ENST00000409672 IGHV4-61A0A0C4DH41 118 aa6.7□□□□□ -1.34
SCN9A-203ENST00000409672 INAFM1C9JVW0 142 aa6.7□□□□□ -1.34
SCN9A-203ENST00000409672 GPHB5Q86YW7 130 aa6.7□□□□□ -1.34
SCN9A-203ENST00000409672 C14orf132Q9NPU4 83 aa6.7□□□□□ -1.34
SCN9A-203ENST00000409672 ZFAND6Q6FIF0 208 aa6.7□□□□□ -1.34
SCN9A-203ENST00000409672 LYPD6BQ8NI32 183 aa6.7□□□□□ -1.34
SCN9A-203ENST00000409672 CAMK2N2Q96S95 79 aa6.7□□□□□ -1.34
SCN9A-203ENST00000409672 TMEM14BQ9NUH8 114 aa6.7□□□□□ -1.34
SCN9A-203ENST00000409672 SIP14410 1827 aa6.7□□□□□ -1.34
SCN9A-203ENST00000409672 OTOGLQ3ZCN5 2332 aa6.7□□□□□ -1.34
SCN9A-203ENST00000409672 CD200R1LQ6Q8B3 271 aa6.7□□□□□ -1.34
SCN9A-203ENST00000409672 TMEM75Q8N9X5 138 aa6.7□□□□□ -1.34
SCN9A-203ENST00000409672 PLXNB3Q9ULL4 1909 aa6.7□□□□□ -1.34
SCN9A-203ENST00000409672 ELANEP08246 267 aa6.7□□□□□ -1.34
SCN9A-203ENST00000409672 BLCAPP62952 87 aa6.7□□□□□ -1.34
SCN9A-203ENST00000409672 C9orf47Q6ZRZ4 202 aa6.7□□□□□ -1.34
SCN9A-203ENST00000409672 CFHR4Q92496 578 aa6.7□□□□□ -1.34
SCN9A-203ENST00000409672 OBSL1O75147 1896 aa6.69□□□□□ -1.34
SCN9A-203ENST00000409672 IGHV4OR15-8A0A075B7B6 117 aa6.69□□□□□ -1.34
SCN9A-203ENST00000409672 A0A087WW49 117 aa6.69□□□□□ -1.34
SCN9A-203ENST00000409672 AMTNQ6UX39 209 aa6.69□□□□□ -1.34
SCN9A-203ENST00000409672 J3QLI3 93 aa6.69□□□□□ -1.34
SCN9A-203ENST00000409672 PRR25Q96S07 402 aa6.69□□□□□ -1.34
SCN9A-203ENST00000409672 ZC2HC1BQ5TFG8 222 aa6.69□□□□□ -1.34
SCN9A-203ENST00000409672 B3GALT5-AS1P59052 145 aa6.69□□□□□ -1.34
SCN9A-203ENST00000409672 C17orf77Q96MU5 243 aa6.69□□□□□ -1.34
SCN9A-203ENST00000409672 RNF222A6NCQ9 220 aa6.68□□□□□ -1.34
SCN9A-203ENST00000409672 BOD1L2Q8IYS8 172 aa6.68□□□□□ -1.34
SCN9A-203ENST00000409672 SIGMAR1Q99720 223 aa6.68□□□□□ -1.34
SCN9A-203ENST00000409672 IGLV2-33A0A075B6J2 118 aaPredicted RBP6.68□□□□□ -1.34
SCN9A-203ENST00000409672 NBL1P41271 181 aa6.68□□□□□ -1.34
SCN9A-203ENST00000409672 FOXE3Q13461 319 aa6.68□□□□□ -1.34
SCN9A-203ENST00000409672 CXCL1P09341 107 aa6.68□□□□□ -1.34
SCN9A-203ENST00000409672 EGR2P11161 476 aaPredicted RBP6.68□□□□□ -1.34
SCN9A-203ENST00000409672 ICOSQ9Y6W8 199 aa6.68□□□□□ -1.34
SCN9A-203ENST00000409672 PLXNB1O43157 2135 aa6.68□□□□□ -1.34
SCN9A-203ENST00000409672 A0A0G2JRQ6 117 aa6.68□□□□□ -1.34
SCN9A-203ENST00000409672 SPART-AS1P0CW21 52 aa6.68□□□□□ -1.34
SCN9A-203ENST00000409672 PNRC2Q9NPJ4 139 aaKnown RBP6.68□□□□□ -1.34
SCN9A-203ENST00000409672 WIPF3A6NGB9 483 aa6.68□□□□□ -1.34
SCN9A-203ENST00000409672 SDHAF1A6NFY7 115 aa6.68□□□□□ -1.34
SCN9A-203ENST00000409672 LY6G6CO95867 125 aa6.67□□□□□ -1.34
SCN9A-203ENST00000409672 AMBPP02760 352 aa6.67□□□□□ -1.34
SCN9A-203ENST00000409672 ZNF362Q5T0B9 420 aaPredicted RBP6.67□□□□□ -1.34
SCN9A-203ENST00000409672 IGLV3-32A0A0A0MS00 114 aa6.67□□□□□ -1.34
SCN9A-203ENST00000409672 SPRNQ5BIV9 151 aa6.67□□□□□ -1.34
SCN9A-203ENST00000409672 IGLV3-9A0A075B6K5 115 aa6.67□□□□□ -1.34
SCN9A-203ENST00000409672 ZNF134P52741 427 aa6.67□□□□□ -1.34
SCN9A-203ENST00000409672 H0YIZ8 118 aa6.67□□□□□ -1.34
SCN9A-203ENST00000409672 WT1P19544 449 aaPredicted RBP6.67□□□□□ -1.34
SCN9A-203ENST00000409672 C15orf62A8K5M9 175 aa6.67□□□□□ -1.34
SCN9A-203ENST00000409672 WDR83OSQ9Y284 106 aa6.67□□□□□ -1.34
SCN9A-203ENST00000409672 IGHV7-4-1A0A0J9YVY3 117 aa6.66□□□□□ -1.34
SCN9A-203ENST00000409672 C8orf31Q8N9H6 132 aa6.66□□□□□ -1.34
SCN9A-203ENST00000409672 IGHV2-5P01817 119 aa6.66□□□□□ -1.34
SCN9A-203ENST00000409672 CTSGP08311 255 aa6.66□□□□□ -1.34
SCN9A-203ENST00000409672 HSD52Q0P140 79 aa6.66□□□□□ -1.34
SCN9A-203ENST00000409672 WIPF2Q8TF74 440 aaPredicted RBP6.66□□□□□ -1.34
SCN9A-203ENST00000409672 H0Y9J4 135 aa6.66□□□□□ -1.34
SCN9A-203ENST00000409672 ADAMTSL5Q6ZMM2 481 aa6.66□□□□□ -1.34
SCN9A-203ENST00000409672 SHANK2-AS3Q9BTD1 123 aa6.66□□□□□ -1.34
SCN9A-203ENST00000409672 GFI1Q99684 422 aa6.66□□□□□ -1.34
SCN9A-203ENST00000409672 SMAD5-AS1Q9Y6J3 95 aa6.66□□□□□ -1.34
SCN9A-203ENST00000409672 ZNF503-AS2A6NEH8 195 aa6.66□□□□□ -1.34
SCN9A-203ENST00000409672 CACNA1HO95180 2353 aa6.66□□□□□ -1.34
SCN9A-203ENST00000409672 MRPL53Q96EL3 112 aaKnown RBP6.66□□□□□ -1.34
SCN9A-203ENST00000409672 NDUFA4O00483 81 aa6.66□□□□□ -1.34
SCN9A-203ENST00000409672 IFI6P09912 130 aa6.66□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms