RNA–Protein interactions for RNA: ENST00000409323.1

CHRNA1-204, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 1 (best) BASIC

Gene CHRNA1, Length 1,585 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-204ENST00000409323 RHEBQ15382 184 aa10.29□□□□□ -0.76
CHRNA1-204ENST00000409323 GFI1BQ5VTD9 330 aa10.29□□□□□ -0.76
CHRNA1-204ENST00000409323 ARL6IP6Q8N6S5 226 aa10.29□□□□□ -0.76
CHRNA1-204ENST00000409323 FAM19A4Q96LR4 140 aa10.29□□□□□ -0.76
CHRNA1-204ENST00000409323 PARLQ9H300 379 aa10.29□□□□□ -0.76
CHRNA1-204ENST00000409323 SERTM2A0A1B0GWG4 89 aa10.28□□□□□ -0.76
CHRNA1-204ENST00000409323 B4DEV8 164 aa10.28□□□□□ -0.76
CHRNA1-204ENST00000409323 GPX1P07203 203 aa10.28□□□□□ -0.76
CHRNA1-204ENST00000409323 LEPP41159 167 aa10.28□□□□□ -0.76
CHRNA1-204ENST00000409323 TMEM183BQ1AE95 376 aa10.28□□□□□ -0.76
CHRNA1-204ENST00000409323 MORN3Q6PF18 240 aaPredicted RBP10.28□□□□□ -0.76
CHRNA1-204ENST00000409323 FMC1Q96HJ9 113 aa10.28□□□□□ -0.76
CHRNA1-204ENST00000409323 A0A087WWC5 75 aa10.27□□□□□ -0.76
CHRNA1-204ENST00000409323 C7orf77A4D0Y5 90 aa10.27□□□□□ -0.76
CHRNA1-204ENST00000409323 ZNF727A8MUV8 499 aa10.27□□□□□ -0.76
CHRNA1-204ENST00000409323 HTN1P15515 57 aa10.27□□□□□ -0.76
CHRNA1-204ENST00000409323 ZNF80P51504 273 aaPredicted RBP10.27□□□□□ -0.76
CHRNA1-204ENST00000409323 TMEM241Q24JQ0 296 aa10.27□□□□□ -0.76
CHRNA1-204ENST00000409323 CENPWQ5EE01 88 aa10.27□□□□□ -0.76
CHRNA1-204ENST00000409323 CLUHP3Q96NS8 147 aa10.27□□□□□ -0.76
CHRNA1-204ENST00000409323 NAT8Q9UHE5 227 aa10.27□□□□□ -0.76
CHRNA1-204ENST00000409323 KLF12Q9Y4X4 402 aa10.27□□□□□ -0.76
CHRNA1-204ENST00000409323 TRBV20OR9-2A0A075B6H5 130 aa10.26□□□□□ -0.77
CHRNA1-204ENST00000409323 KIR2DL5BA0A0G2JN68 375 aa10.26□□□□□ -0.77
CHRNA1-204ENST00000409323 KIR2DL5BA0A0G2JPC4 375 aa10.26□□□□□ -0.77
CHRNA1-204ENST00000409323 TSPOP30536 169 aa10.26□□□□□ -0.77
CHRNA1-204ENST00000409323 BAGE2Q86Y30 109 aa10.26□□□□□ -0.77
CHRNA1-204ENST00000409323 KIR2DL5AQ8N109 375 aa10.26□□□□□ -0.77
CHRNA1-204ENST00000409323 C1orf158Q8N1D5 194 aa10.26□□□□□ -0.77
CHRNA1-204ENST00000409323 KIR2DL5BQ8NHK3 375 aa10.26□□□□□ -0.77
CHRNA1-204ENST00000409323 IGF2BP2-AS1Q96M15 143 aa10.26□□□□□ -0.77
CHRNA1-204ENST00000409323 SMIM7Q9BQ49 75 aa10.26□□□□□ -0.77
CHRNA1-204ENST00000409323 NDFIP1Q9BT67 221 aa10.26□□□□□ -0.77
CHRNA1-204ENST00000409323 TMEM242Q9NWH2 141 aa10.26□□□□□ -0.77
CHRNA1-204ENST00000409323 LY96Q9Y6Y9 160 aa10.26□□□□□ -0.77
CHRNA1-204ENST00000409323 NBEAL2Q6ZNJ1 2754 aa10.26□□□□□ -0.77
CHRNA1-204ENST00000409323 C7orf71A4D174 169 aa10.26□□□□□ -0.77
CHRNA1-204ENST00000409323 KLLNB2CW77 178 aa10.26□□□□□ -0.77
CHRNA1-204ENST00000409323 C9JCJ5 164 aa10.26□□□□□ -0.77
CHRNA1-204ENST00000409323 LTAP01374 205 aa10.26□□□□□ -0.77
CHRNA1-204ENST00000409323 CRISP2P16562 243 aa10.26□□□□□ -0.77
CHRNA1-204ENST00000409323 CSNK1G2-AS1Q8NCQ2 148 aa10.26□□□□□ -0.77
CHRNA1-204ENST00000409323 ZC2HC1AQ96GY0 325 aa10.26□□□□□ -0.77
CHRNA1-204ENST00000409323 ODF3Q96PU9 254 aa10.26□□□□□ -0.77
CHRNA1-204ENST00000409323 GCGP01275 180 aa10.25□□□□□ -0.77
CHRNA1-204ENST00000409323 INSP01308 110 aa10.25□□□□□ -0.77
CHRNA1-204ENST00000409323 MUC21Q5SSG8 566 aa10.25□□□□□ -0.77
CHRNA1-204ENST00000409323 PRR27Q6MZM9 219 aa10.25□□□□□ -0.77
CHRNA1-204ENST00000409323 RCHY1Q96PM5 261 aa10.25□□□□□ -0.77
CHRNA1-204ENST00000409323 TMEM208Q9BTX3 173 aa10.25□□□□□ -0.77
CHRNA1-204ENST00000409323 NAGKQ9UJ70 344 aa10.25□□□□□ -0.77
CHRNA1-204ENST00000409323 MGST1P10620 155 aaKnown RBP10.24□□□□□ -0.77
CHRNA1-204ENST00000409323 GNG4P50150 75 aa10.24□□□□□ -0.77
CHRNA1-204ENST00000409323 B9D2Q9BPU9 175 aa10.24□□□□□ -0.77
CHRNA1-204ENST00000409323 C1QTNF4Q9BXJ3 329 aa10.24□□□□□ -0.77
CHRNA1-204ENST00000409323 ZNF705GA8MUZ8 300 aaPredicted RBP10.23□□□□□ -0.77
CHRNA1-204ENST00000409323 DEFB4AO15263 64 aa10.23□□□□□ -0.77
CHRNA1-204ENST00000409323 IGLV2-8P01709 118 aa10.23□□□□□ -0.77
CHRNA1-204ENST00000409323 CRIP1P50238 77 aa10.23□□□□□ -0.77
CHRNA1-204ENST00000409323 TAS2R60P59551 318 aa10.23□□□□□ -0.77
CHRNA1-204ENST00000409323 RPL23P62829 140 aaKnown RBP10.23□□□□□ -0.77
CHRNA1-204ENST00000409323 OR5I1Q13606 314 aa10.23□□□□□ -0.77
CHRNA1-204ENST00000409323 SMUG1Q53HV7 270 aa10.23□□□□□ -0.77
CHRNA1-204ENST00000409323 SAPCD1Q5SSQ6 148 aa10.23□□□□□ -0.77
CHRNA1-204ENST00000409323 LINC01587Q99440 93 aa10.23□□□□□ -0.77
CHRNA1-204ENST00000409323 OVOL2Q9BRP0 275 aa10.23□□□□□ -0.77
CHRNA1-204ENST00000409323 LENEPQ9Y5L5 61 aa10.23□□□□□ -0.77
CHRNA1-204ENST00000409323 CXorf65A6NEN9 183 aa10.22□□□□□ -0.77
CHRNA1-204ENST00000409323 M0R036 132 aa10.22□□□□□ -0.77
CHRNA1-204ENST00000409323 UBE2CO00762 179 aa10.22□□□□□ -0.77
CHRNA1-204ENST00000409323 SPRY2O43597 315 aa10.22□□□□□ -0.77
CHRNA1-204ENST00000409323 ZNF324O75467 553 aaPredicted RBP10.22□□□□□ -0.77
CHRNA1-204ENST00000409323 Q6ZWC4 215 aa10.22□□□□□ -0.77
CHRNA1-204ENST00000409323 LINC01551Q86U37 167 aa10.22□□□□□ -0.77
CHRNA1-204ENST00000409323 TMEM183AQ8IXX5 376 aa10.22□□□□□ -0.77
CHRNA1-204ENST00000409323 OR11H2Q8NH07 326 aa10.22□□□□□ -0.77
CHRNA1-204ENST00000409323 RNF183Q96D59 192 aa10.22□□□□□ -0.77
CHRNA1-204ENST00000409323 SMCO4Q9NRQ5 59 aa10.22□□□□□ -0.77
CHRNA1-204ENST00000409323 ZFP30Q9Y2G7 519 aa10.22□□□□□ -0.77
CHRNA1-204ENST00000409323 TRBV6-1A0A0K0K1D8 114 aa10.22□□□□□ -0.77
CHRNA1-204ENST00000409323 FBLL1A6NHQ2 334 aaKnown RBP10.22□□□□□ -0.77
CHRNA1-204ENST00000409323 AMBPP02760 352 aa10.22□□□□□ -0.77
CHRNA1-204ENST00000409323 S100A9P06702 114 aaKnown RBP10.22□□□□□ -0.77
CHRNA1-204ENST00000409323 OCC1Q8TAD7 63 aa10.22□□□□□ -0.77
CHRNA1-204ENST00000409323 YPEL4Q96NS1 127 aa10.22□□□□□ -0.77
CHRNA1-204ENST00000409323 TM2D3Q9BRN9 247 aa10.22□□□□□ -0.77
CHRNA1-204ENST00000409323 CTDSP1Q9GZU7 261 aa10.22□□□□□ -0.77
CHRNA1-204ENST00000409323 RPS10P5Q9NQ39 176 aa10.22□□□□□ -0.77
CHRNA1-204ENST00000409323 C11orf21Q9P2W6 132 aa10.22□□□□□ -0.77
CHRNA1-204ENST00000409323 TP53TG3Q9ULZ0 132 aa10.22□□□□□ -0.77
CHRNA1-204ENST00000409323 GOLT1BQ9Y3E0 138 aa10.22□□□□□ -0.77
CHRNA1-204ENST00000409323 K7EN84 100 aa10.21□□□□□ -0.78
CHRNA1-204ENST00000409323 SH2D1AO60880 128 aa10.21□□□□□ -0.78
CHRNA1-204ENST00000409323 AZU1P20160 251 aa10.21□□□□□ -0.78
CHRNA1-204ENST00000409323 MLST8Q9BVC4 326 aa10.21□□□□□ -0.78
CHRNA1-204ENST00000409323 X6R8D5 127 aa10.21□□□□□ -0.78
CHRNA1-204ENST00000409323 PRKDCP78527 4128 aaKnown RBP10.2□□□□□ -0.78
CHRNA1-204ENST00000409323 TENM3Q9P273 2699 aa10.2□□□□□ -0.78
CHRNA1-204ENST00000409323 FBN3Q75N90 2809 aa10.2□□□□□ -0.78
CHRNA1-204ENST00000409323 TRBV7-9A0A0J9YWB2 115 aa10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms