RNA–Protein interactions for RNA: ENST00000409020.5

NIF3L1-202, Transcript of NGG1 interacting factor 3 like 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene NIF3L1, Length 1,680 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-202ENST00000409020 MAP1LC3AQ9H492 121 aa7.43□□□□□ -1.22
NIF3L1-202ENST00000409020 A0A1W2PS18 150 aa7.42□□□□□ -1.22
NIF3L1-202ENST00000409020 GRIFINA4D1Z8 144 aa7.42□□□□□ -1.22
NIF3L1-202ENST00000409020 CA1P00915 261 aaPredicted RBP7.42□□□□□ -1.22
NIF3L1-202ENST00000409020 IGLV2-14P01704 120 aa7.42□□□□□ -1.22
NIF3L1-202ENST00000409020 APOA2P02652 100 aa7.42□□□□□ -1.22
NIF3L1-202ENST00000409020 ECI1P42126 302 aa7.42□□□□□ -1.22
NIF3L1-202ENST00000409020 Q6Q795 121 aa7.42□□□□□ -1.22
NIF3L1-202ENST00000409020 DDB2Q92466 427 aa7.42□□□□□ -1.22
NIF3L1-202ENST00000409020 ARPC1AQ92747 370 aa7.42□□□□□ -1.22
NIF3L1-202ENST00000409020 FLYWCH2Q96CP2 140 aaKnown RBP7.42□□□□□ -1.22
NIF3L1-202ENST00000409020 GPHA2Q96T91 129 aa7.42□□□□□ -1.22
NIF3L1-202ENST00000409020 VGLL1Q99990 258 aa7.42□□□□□ -1.22
NIF3L1-202ENST00000409020 MRPL18Q9H0U6 180 aaKnown RBP7.42□□□□□ -1.22
NIF3L1-202ENST00000409020 RPRMQ9NS64 109 aa7.42□□□□□ -1.22
NIF3L1-202ENST00000409020 GNG13Q9P2W3 67 aa7.42□□□□□ -1.22
NIF3L1-202ENST00000409020 DNAH1Q9P2D7 4330 aa7.41□□□□□ -1.22
NIF3L1-202ENST00000409020 IGKV1D-13A0A0B4J2D9 117 aa7.41□□□□□ -1.22
NIF3L1-202ENST00000409020 J3KT08 172 aa7.41□□□□□ -1.22
NIF3L1-202ENST00000409020 RHODO00212 210 aa7.41□□□□□ -1.22
NIF3L1-202ENST00000409020 LGALS1P09382 135 aaKnown RBP7.41□□□□□ -1.22
NIF3L1-202ENST00000409020 IGKV1-13P0DP09 117 aa7.41□□□□□ -1.22
NIF3L1-202ENST00000409020 GATA2P23769 480 aaPredicted RBP7.41□□□□□ -1.22
NIF3L1-202ENST00000409020 DUTP33316 252 aaKnown RBP7.41□□□□□ -1.22
NIF3L1-202ENST00000409020 RPL30P62888 115 aaKnown RBP7.41□□□□□ -1.22
NIF3L1-202ENST00000409020 FXYD3Q14802 87 aa7.41□□□□□ -1.22
NIF3L1-202ENST00000409020 C9orf66Q5T8R8 295 aa7.41□□□□□ -1.22
NIF3L1-202ENST00000409020 Q6AWC8 147 aa7.41□□□□□ -1.22
NIF3L1-202ENST00000409020 Q6ZS49 121 aa7.41□□□□□ -1.22
NIF3L1-202ENST00000409020 SPATA12Q7Z6I5 190 aa7.41□□□□□ -1.22
NIF3L1-202ENST00000409020 HAPLN4Q86UW8 402 aa7.41□□□□□ -1.22
NIF3L1-202ENST00000409020 SYT8Q8NBV8 401 aa7.41□□□□□ -1.22
NIF3L1-202ENST00000409020 OR4A16Q8NH70 328 aa7.41□□□□□ -1.22
NIF3L1-202ENST00000409020 RNF5Q99942 180 aa7.41□□□□□ -1.22
NIF3L1-202ENST00000409020 ENY2Q9NPA8 101 aa7.41□□□□□ -1.22
NIF3L1-202ENST00000409020 LSM4Q9Y4Z0 139 aaKnown RBP7.41□□□□□ -1.22
NIF3L1-202ENST00000409020 FNDC10F2Z333 226 aa7.41□□□□□ -1.22
NIF3L1-202ENST00000409020 LINC01619G3V211 115 aa7.41□□□□□ -1.22
NIF3L1-202ENST00000409020 RS1O15537 224 aa7.41□□□□□ -1.22
NIF3L1-202ENST00000409020 NDUFV3P56181 108 aaKnown RBP7.41□□□□□ -1.22
NIF3L1-202ENST00000409020 SUPT4H1P63272 117 aaKnown RBP7.41□□□□□ -1.22
NIF3L1-202ENST00000409020 CD69Q07108 199 aa7.41□□□□□ -1.22
NIF3L1-202ENST00000409020 GVQW1Q8N7I0 195 aa7.41□□□□□ -1.22
NIF3L1-202ENST00000409020 LSM10Q969L4 123 aaKnown RBP7.41□□□□□ -1.22
NIF3L1-202ENST00000409020 OR4C12Q96R67 309 aa7.41□□□□□ -1.22
NIF3L1-202ENST00000409020 B9D2Q9BPU9 175 aa7.41□□□□□ -1.22
NIF3L1-202ENST00000409020 C5orf66Q9H5L9 145 aa7.41□□□□□ -1.22
NIF3L1-202ENST00000409020 SCRT2Q9NQ03 307 aa7.41□□□□□ -1.22
NIF3L1-202ENST00000409020 RABAC1Q9UI14 185 aa7.41□□□□□ -1.22
NIF3L1-202ENST00000409020 ANAPC10Q9UM13 185 aa7.41□□□□□ -1.22
NIF3L1-202ENST00000409020 LSM5Q9Y4Y9 91 aaKnown RBP7.41□□□□□ -1.22
NIF3L1-202ENST00000409020 TRGV3P03979 118 aa7.4□□□□□ -1.23
NIF3L1-202ENST00000409020 UBE2G1P62253 170 aa7.4□□□□□ -1.23
NIF3L1-202ENST00000409020 FOXI1Q12951 378 aa7.4□□□□□ -1.23
NIF3L1-202ENST00000409020 VKORC1L1Q8N0U8 176 aa7.4□□□□□ -1.23
NIF3L1-202ENST00000409020 ZNRF2Q8NHG8 242 aa7.4□□□□□ -1.23
NIF3L1-202ENST00000409020 GNB1LQ9BYB4 327 aa7.4□□□□□ -1.23
NIF3L1-202ENST00000409020 CEBPZOSA8MTT3 80 aa7.39□□□□□ -1.23
NIF3L1-202ENST00000409020 CCDC179H3BU77 68 aa7.39□□□□□ -1.23
NIF3L1-202ENST00000409020 OVOL1O14753 267 aa7.39□□□□□ -1.23
NIF3L1-202ENST00000409020 CRXO43186 299 aaPredicted RBP7.39□□□□□ -1.23
NIF3L1-202ENST00000409020 TRBV12-3P01733 135 aa7.39□□□□□ -1.23
NIF3L1-202ENST00000409020 MT-ATP8P03928 68 aa7.39□□□□□ -1.23
NIF3L1-202ENST00000409020 BRWD1-AS2P59051 145 aa7.39□□□□□ -1.23
NIF3L1-202ENST00000409020 EIF4EBP1Q13541 118 aaPredicted RBP7.39□□□□□ -1.23
NIF3L1-202ENST00000409020 C10orf55Q5SWW7 151 aa7.39□□□□□ -1.23
NIF3L1-202ENST00000409020 RBPMS2Q6ZRY4 209 aaKnown RBP7.39□□□□□ -1.23
NIF3L1-202ENST00000409020 BPIFA4PQ86YQ2 179 aa7.39□□□□□ -1.23
NIF3L1-202ENST00000409020 ZNF645Q8N7E2 425 aa7.39□□□□□ -1.23
NIF3L1-202ENST00000409020 MRPL32Q9BYC8 188 aaKnown RBP7.39□□□□□ -1.23
NIF3L1-202ENST00000409020 ZNF355PQ9NSJ1 428 aa7.39□□□□□ -1.23
NIF3L1-202ENST00000409020 ZNF256Q9Y2P7 627 aaPredicted RBP7.39□□□□□ -1.23
NIF3L1-202ENST00000409020 TNCP24821 2201 aa7.39□□□□□ -1.23
NIF3L1-202ENST00000409020 TMEM262E9PQX1 116 aa7.38□□□□□ -1.23
NIF3L1-202ENST00000409020 FCGR3BO75015 233 aa7.38□□□□□ -1.23
NIF3L1-202ENST00000409020 SAA1P0DJI8 122 aaPredicted RBP7.38□□□□□ -1.23
NIF3L1-202ENST00000409020 NTF3P20783 257 aa7.38□□□□□ -1.23
NIF3L1-202ENST00000409020 ATP5G2Q06055 141 aa7.38□□□□□ -1.23
NIF3L1-202ENST00000409020 RTL8BQ17RB0 113 aa7.38□□□□□ -1.23
NIF3L1-202ENST00000409020 FAM106AQ4KMX7 169 aa7.38□□□□□ -1.23
NIF3L1-202ENST00000409020 OR2W1Q9Y3N9 320 aa7.38□□□□□ -1.23
NIF3L1-202ENST00000409020 HYDINQ4G0P3 5121 aa7.38□□□□□ -1.23
NIF3L1-202ENST00000409020 TNFSF12O43508 249 aa7.38□□□□□ -1.23
NIF3L1-202ENST00000409020 PMCHP20382 165 aa7.38□□□□□ -1.23
NIF3L1-202ENST00000409020 KIR3DS1Q14943 382 aa7.38□□□□□ -1.23
NIF3L1-202ENST00000409020 RPEL1Q2QD12 228 aa7.38□□□□□ -1.23
NIF3L1-202ENST00000409020 TMEM191AQ9H0A3 160 aa7.38□□□□□ -1.23
NIF3L1-202ENST00000409020 TENM2Q9NT68 2774 aa7.37□□□□□ -1.23
NIF3L1-202ENST00000409020 ZFP92A6NM28 416 aa7.37□□□□□ -1.23
NIF3L1-202ENST00000409020 FAM90A26D6RGX4 464 aa7.37□□□□□ -1.23
NIF3L1-202ENST00000409020 E7EUB6 86 aa7.37□□□□□ -1.23
NIF3L1-202ENST00000409020 SYS1-DBNDD2H3BUS1 97 aa7.37□□□□□ -1.23
NIF3L1-202ENST00000409020 COX8AP10176 69 aa7.37□□□□□ -1.23
NIF3L1-202ENST00000409020 IFITM1P13164 125 aa7.37□□□□□ -1.23
NIF3L1-202ENST00000409020 MYOD1P15172 320 aa7.37□□□□□ -1.23
NIF3L1-202ENST00000409020 MEIG1Q5JSS6 88 aa7.37□□□□□ -1.23
NIF3L1-202ENST00000409020 LHFPL1Q86WI0 220 aa7.37□□□□□ -1.23
NIF3L1-202ENST00000409020 SRSF12Q8WXF0 261 aaKnown RBP7.37□□□□□ -1.23
NIF3L1-202ENST00000409020 SGK494Q96LW2 274 aa7.37□□□□□ -1.23
NIF3L1-202ENST00000409020 SPANXDQ9BXN6 97 aa7.37□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms