RNA–Protein interactions for RNA: ENST00000407082.3

SMARCB1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 5 BASIC

Gene SMARCB1, Length 1,182 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-203ENST00000407082 IGF1P05019 195 aa9.91□□□□□ -0.82
SMARCB1-203ENST00000407082 KRTDAPP60985 99 aa9.91□□□□□ -0.82
SMARCB1-203ENST00000407082 CLEC19AQ6UXS0 136 aa9.91□□□□□ -0.82
SMARCB1-203ENST00000407082 KIR2DL5AQ8N109 375 aa9.91□□□□□ -0.82
SMARCB1-203ENST00000407082 KLHDC1Q8N7A1 406 aa9.91□□□□□ -0.82
SMARCB1-203ENST00000407082 PRR25Q96S07 402 aa9.91□□□□□ -0.82
SMARCB1-203ENST00000407082 C20orf144Q9BQM9 153 aa9.91□□□□□ -0.82
SMARCB1-203ENST00000407082 ZFAND3Q9H8U3 227 aa9.91□□□□□ -0.82
SMARCB1-203ENST00000407082 LOC102724200A0A096LPH7 203 aaPredicted RBP9.9□□□□□ -0.82
SMARCB1-203ENST00000407082 A0A0G2JLM5 398 aa9.9□□□□□ -0.82
SMARCB1-203ENST00000407082 C20orf202A1L168 122 aa9.9□□□□□ -0.82
SMARCB1-203ENST00000407082 FABP5P3A8MUU1 101 aa9.9□□□□□ -0.82
SMARCB1-203ENST00000407082 M0R2Z0 102 aa9.9□□□□□ -0.82
SMARCB1-203ENST00000407082 TRGV3P03979 118 aa9.9□□□□□ -0.82
SMARCB1-203ENST00000407082 GDF5OSQ5U4N7 250 aa9.9□□□□□ -0.82
SMARCB1-203ENST00000407082 LCN12Q6JVE5 192 aa9.9□□□□□ -0.82
SMARCB1-203ENST00000407082 MRAPQ8TCY5 172 aa9.9□□□□□ -0.82
SMARCB1-203ENST00000407082 C14orf144Q96I85 54 aa9.9□□□□□ -0.82
SMARCB1-203ENST00000407082 ASCL2Q99929 193 aa9.9□□□□□ -0.82
SMARCB1-203ENST00000407082 ZNF580Q9UK33 172 aa9.9□□□□□ -0.82
SMARCB1-203ENST00000407082 M0R3E3 92 aa9.89□□□□□ -0.83
SMARCB1-203ENST00000407082 NDUFA7O95182 113 aa9.89□□□□□ -0.83
SMARCB1-203ENST00000407082 IGHG2P01859 326 aa9.89□□□□□ -0.83
SMARCB1-203ENST00000407082 NTF3P20783 257 aa9.89□□□□□ -0.83
SMARCB1-203ENST00000407082 BEAN1Q3B7T3 259 aa9.89□□□□□ -0.83
SMARCB1-203ENST00000407082 RNASEKQ6P5S7 137 aaKnown RBP9.89□□□□□ -0.83
SMARCB1-203ENST00000407082 NIT1Q86X76 327 aa9.89□□□□□ -0.83
SMARCB1-203ENST00000407082 F2Z2F3 143 aa9.88□□□□□ -0.83
SMARCB1-203ENST00000407082 G3V318 75 aa9.88□□□□□ -0.83
SMARCB1-203ENST00000407082 NDUFA4O00483 81 aa9.88□□□□□ -0.83
SMARCB1-203ENST00000407082 SH2D1AO60880 128 aa9.88□□□□□ -0.83
SMARCB1-203ENST00000407082 BTF3P20290 206 aaKnown RBP9.88□□□□□ -0.83
SMARCB1-203ENST00000407082 HIST1H1AQ02539 215 aaPredicted RBP9.88□□□□□ -0.83
SMARCB1-203ENST00000407082 C19orf54Q5BKX5 351 aa9.88□□□□□ -0.83
SMARCB1-203ENST00000407082 ZNF493Q6ZR52 646 aa9.88□□□□□ -0.83
SMARCB1-203ENST00000407082 RCHY1Q96PM5 261 aa9.88□□□□□ -0.83
SMARCB1-203ENST00000407082 SSBP4Q9BWG4 385 aaPredicted RBP9.88□□□□□ -0.83
SMARCB1-203ENST00000407082 PPP1R14DQ9NXH3 145 aa9.88□□□□□ -0.83
SMARCB1-203ENST00000407082 SMAD5-AS1Q9Y6J3 95 aa9.88□□□□□ -0.83
SMARCB1-203ENST00000407082 U3KQE9 123 aa9.88□□□□□ -0.83
SMARCB1-203ENST00000407082 KMT2CQ8NEZ4 4911 aaKnown RBP9.88□□□□□ -0.83
SMARCB1-203ENST00000407082 APOHP02749 345 aaPredicted RBP9.87□□□□□ -0.83
SMARCB1-203ENST00000407082 LINC00614P0C842 121 aa9.87□□□□□ -0.83
SMARCB1-203ENST00000407082 ARL3P36405 182 aa9.87□□□□□ -0.83
SMARCB1-203ENST00000407082 TMEM78Q5T7P6 136 aa9.87□□□□□ -0.83
SMARCB1-203ENST00000407082 SAMD13Q5VXD3 122 aa9.87□□□□□ -0.83
SMARCB1-203ENST00000407082 LINC01006Q8NI28 216 aa9.87□□□□□ -0.83
SMARCB1-203ENST00000407082 CCDC140Q96MF4 163 aa9.87□□□□□ -0.83
SMARCB1-203ENST00000407082 MIEN1Q9BRT3 115 aa9.87□□□□□ -0.83
SMARCB1-203ENST00000407082 NPFFR1Q9GZQ6 430 aa9.87□□□□□ -0.83
SMARCB1-203ENST00000407082 HSPB8Q9UJY1 196 aa9.87□□□□□ -0.83
SMARCB1-203ENST00000407082 LENEPQ9Y5L5 61 aa9.87□□□□□ -0.83
SMARCB1-203ENST00000407082 M0R143 59 aa9.86□□□□□ -0.83
SMARCB1-203ENST00000407082 C3orf79P0CE67 100 aa9.86□□□□□ -0.83
SMARCB1-203ENST00000407082 BLCAPP62952 87 aa9.86□□□□□ -0.83
SMARCB1-203ENST00000407082 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa9.86□□□□□ -0.83
SMARCB1-203ENST00000407082 C8orf49Q96NF6 230 aa9.86□□□□□ -0.83
SMARCB1-203ENST00000407082 C2orf88Q9BSF0 95 aa9.86□□□□□ -0.83
SMARCB1-203ENST00000407082 IGKV2-40A0A087WW87 121 aaPredicted RBP9.85□□□□□ -0.83
SMARCB1-203ENST00000407082 IGKV2D-40P01614 121 aaPredicted RBP9.85□□□□□ -0.83
SMARCB1-203ENST00000407082 ARMS2P0C7Q2 107 aa9.85□□□□□ -0.83
SMARCB1-203ENST00000407082 CRIP1P50238 77 aa9.85□□□□□ -0.83
SMARCB1-203ENST00000407082 Q6ZSV7 163 aa9.85□□□□□ -0.83
SMARCB1-203ENST00000407082 FER1L6-AS1Q8NA97 138 aa9.85□□□□□ -0.83
SMARCB1-203ENST00000407082 TMEM70Q9BUB7 260 aa9.85□□□□□ -0.83
SMARCB1-203ENST00000407082 RYR3Q15413 4870 aa9.84□□□□□ -0.83
SMARCB1-203ENST00000407082 PPBPP02775 128 aa9.84□□□□□ -0.83
SMARCB1-203ENST00000407082 CTRLP40313 264 aa9.84□□□□□ -0.83
SMARCB1-203ENST00000407082 ZNF138P52744 262 aa9.84□□□□□ -0.83
SMARCB1-203ENST00000407082 PROK1P58294 105 aa9.84□□□□□ -0.83
SMARCB1-203ENST00000407082 LYZL1Q6UWQ5 148 aa9.84□□□□□ -0.83
SMARCB1-203ENST00000407082 Q6ZS46 218 aa9.84□□□□□ -0.83
SMARCB1-203ENST00000407082 FA2HQ7L5A8 372 aa9.84□□□□□ -0.83
SMARCB1-203ENST00000407082 SMIM15Q7Z3B0 74 aa9.84□□□□□ -0.83
SMARCB1-203ENST00000407082 LINC01548A6NM66 108 aa9.83□□□□□ -0.84
SMARCB1-203ENST00000407082 OVOL1O14753 267 aa9.83□□□□□ -0.84
SMARCB1-203ENST00000407082 LEPROTL1O95214 131 aa9.83□□□□□ -0.84
SMARCB1-203ENST00000407082 ORM1P02763 201 aa9.83□□□□□ -0.84
SMARCB1-203ENST00000407082 LINC01559Q495D7 138 aa9.83□□□□□ -0.84
SMARCB1-203ENST00000407082 FAM104BQ5XKR9 115 aa9.83□□□□□ -0.84
SMARCB1-203ENST00000407082 ZNF705AQ6ZN79 300 aaPredicted RBP9.83□□□□□ -0.84
SMARCB1-203ENST00000407082 C9orf47Q6ZRZ4 202 aa9.83□□□□□ -0.84
SMARCB1-203ENST00000407082 FAM19A2Q8N3H0 131 aa9.83□□□□□ -0.84
SMARCB1-203ENST00000407082 PRSS3P2Q8NHM4 247 aa9.83□□□□□ -0.84
SMARCB1-203ENST00000407082 C16orf92Q96LL3 132 aa9.83□□□□□ -0.84
SMARCB1-203ENST00000407082 LINC00477Q96M19 166 aa9.83□□□□□ -0.84
SMARCB1-203ENST00000407082 TPPP3Q9BW30 176 aa9.83□□□□□ -0.84
SMARCB1-203ENST00000407082 MAP1LC3CQ9BXW4 147 aa9.83□□□□□ -0.84
SMARCB1-203ENST00000407082 TMEM191AQ9H0A3 160 aa9.83□□□□□ -0.84
SMARCB1-203ENST00000407082 C16orf95Q9H693 158 aa9.83□□□□□ -0.84
SMARCB1-203ENST00000407082 ZNF702PQ9H963 129 aa9.83□□□□□ -0.84
SMARCB1-203ENST00000407082 UQCR10Q9UDW1 63 aa9.83□□□□□ -0.84
SMARCB1-203ENST00000407082 LAMTOR2Q9Y2Q5 125 aa9.83□□□□□ -0.84
SMARCB1-203ENST00000407082 IGHV3-35A0A0C4DH35 117 aa9.82□□□□□ -0.84
SMARCB1-203ENST00000407082 PPIFP30405 207 aaKnown RBP9.82□□□□□ -0.84
SMARCB1-203ENST00000407082 FAM106AQ4KMX7 169 aa9.82□□□□□ -0.84
SMARCB1-203ENST00000407082 SPATA45Q537H7 98 aa9.82□□□□□ -0.84
SMARCB1-203ENST00000407082 KPRPQ5T749 579 aaPredicted RBP9.82□□□□□ -0.84
SMARCB1-203ENST00000407082 SAMD5Q5TGI4 173 aa9.82□□□□□ -0.84
SMARCB1-203ENST00000407082 PET117Q6UWS5 81 aa9.82□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms