RNA–Protein interactions for RNA: ENST00000406949.5

PCNX4-204, Transcript of pecanex 4, humanhuman

TSL 2 BASIC

Gene PCNX4, Length 3,513 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX4-204ENST00000406949 PRAC2D3DTV9 90 aa9.27□□□□□ -0.93
PCNX4-204ENST00000406949 RPL24P83731 157 aaKnown RBP9.27□□□□□ -0.93
PCNX4-204ENST00000406949 LCNL1Q6ZST4 164 aa9.27□□□□□ -0.93
PCNX4-204ENST00000406949 DTX2Q86UW9 622 aa9.27□□□□□ -0.93
PCNX4-204ENST00000406949 Q8N976 141 aa9.27□□□□□ -0.93
PCNX4-204ENST00000406949 TRAV41A0A0B4J266 112 aa9.26□□□□□ -0.93
PCNX4-204ENST00000406949 RPS20P60866 119 aaKnown RBP9.26□□□□□ -0.93
PCNX4-204ENST00000406949 SIRPDQ9H106 197 aa9.26□□□□□ -0.93
PCNX4-204ENST00000406949 C2orf70A6NJV1 201 aa9.26□□□□□ -0.93
PCNX4-204ENST00000406949 SRD5A1P18405 259 aa9.26□□□□□ -0.93
PCNX4-204ENST00000406949 CACNG7P62955 275 aa9.26□□□□□ -0.93
PCNX4-204ENST00000406949 GTSF1LQ9H1H1 148 aa9.26□□□□□ -0.93
PCNX4-204ENST00000406949 MSRB1Q9NZV6 116 aa9.26□□□□□ -0.93
PCNX4-204ENST00000406949 MPV17L2Q567V2 206 aa9.26□□□□□ -0.93
PCNX4-204ENST00000406949 MAP1LC3AQ9H492 121 aa9.26□□□□□ -0.93
PCNX4-204ENST00000406949 UTP20O75691 2785 aaKnown RBP9.25□□□□□ -0.93
PCNX4-204ENST00000406949 BOD1L2Q8IYS8 172 aa9.25□□□□□ -0.93
PCNX4-204ENST00000406949 H3BUX3 64 aa9.25□□□□□ -0.93
PCNX4-204ENST00000406949 RAB9AP51151 201 aa9.25□□□□□ -0.93
PCNX4-204ENST00000406949 PAX8Q06710 450 aa9.25□□□□□ -0.93
PCNX4-204ENST00000406949 PIP4P2Q8N4L2 257 aa9.25□□□□□ -0.93
PCNX4-204ENST00000406949 TRAV26-1A0A087WT03 109 aa9.25□□□□□ -0.93
PCNX4-204ENST00000406949 ZNF80P51504 273 aaPredicted RBP9.25□□□□□ -0.93
PCNX4-204ENST00000406949 FAM106AQ4KMX7 169 aa9.25□□□□□ -0.93
PCNX4-204ENST00000406949 MRPL51Q4U2R6 128 aaKnown RBP9.25□□□□□ -0.93
PCNX4-204ENST00000406949 FAM104BQ5XKR9 115 aa9.25□□□□□ -0.93
PCNX4-204ENST00000406949 SPATA12Q7Z6I5 190 aa9.25□□□□□ -0.93
PCNX4-204ENST00000406949 M0R381 172 aa9.24□□□□□ -0.93
PCNX4-204ENST00000406949 HIST1H1AQ02539 215 aaPredicted RBP9.24□□□□□ -0.93
PCNX4-204ENST00000406949 PET117Q6UWS5 81 aa9.24□□□□□ -0.93
PCNX4-204ENST00000406949 PRSS57Q6UWY2 283 aa9.24□□□□□ -0.93
PCNX4-204ENST00000406949 ITLN2Q8WWU7 325 aaPredicted RBP9.24□□□□□ -0.93
PCNX4-204ENST00000406949 URB1-AS1Q96HZ7 61 aa9.24□□□□□ -0.93
PCNX4-204ENST00000406949 SIGLEC8Q9NYZ4 499 aa9.24□□□□□ -0.93
PCNX4-204ENST00000406949 MOB4Q9Y3A3 225 aa9.24□□□□□ -0.93
PCNX4-204ENST00000406949 A0A087X0K7 114 aa9.24□□□□□ -0.93
PCNX4-204ENST00000406949 CENPVL3A0A0U1RRI6 287 aa9.24□□□□□ -0.93
PCNX4-204ENST00000406949 KLK15Q9H2R5 256 aa9.24□□□□□ -0.93
PCNX4-204ENST00000406949 ZNF462Q96JM2 2506 aa9.24□□□□□ -0.93
PCNX4-204ENST00000406949 FBLL1A6NHQ2 334 aaKnown RBP9.23□□□□□ -0.93
PCNX4-204ENST00000406949 NPIPB6E9PJ23 425 aa9.23□□□□□ -0.93
PCNX4-204ENST00000406949 SPRY2O43597 315 aa9.23□□□□□ -0.93
PCNX4-204ENST00000406949 IGHV4-39P01824 125 aa9.23□□□□□ -0.93
PCNX4-204ENST00000406949 MGPP08493 103 aa9.23□□□□□ -0.93
PCNX4-204ENST00000406949 PAX2Q02962 417 aa9.23□□□□□ -0.93
PCNX4-204ENST00000406949 ZNF502Q8TBZ5 544 aa9.23□□□□□ -0.93
PCNX4-204ENST00000406949 SLC50A1Q9BRV3 221 aa9.23□□□□□ -0.93
PCNX4-204ENST00000406949 ITPR1Q14643 2758 aa9.23□□□□□ -0.93
PCNX4-204ENST00000406949 NPYP01303 97 aa9.23□□□□□ -0.93
PCNX4-204ENST00000406949 CTRLP40313 264 aa9.23□□□□□ -0.93
PCNX4-204ENST00000406949 CRYBA4P53673 196 aa9.23□□□□□ -0.93
PCNX4-204ENST00000406949 LMO4P61968 165 aa9.23□□□□□ -0.93
PCNX4-204ENST00000406949 LOXL1Q08397 574 aaPredicted RBP9.23□□□□□ -0.93
PCNX4-204ENST00000406949 SHISA2Q6UWI4 295 aa9.23□□□□□ -0.93
PCNX4-204ENST00000406949 NAA38Q9BRA0 125 aaKnown RBP9.23□□□□□ -0.93
PCNX4-204ENST00000406949 ST20Q9HBF5 79 aa9.23□□□□□ -0.93
PCNX4-204ENST00000406949 F8W735 103 aaPredicted RBP9.23□□□□□ -0.93
PCNX4-204ENST00000406949 IGHV4-61A0A0C4DH41 118 aa9.22□□□□□ -0.93
PCNX4-204ENST00000406949 H3BVH4 76 aa9.22□□□□□ -0.93
PCNX4-204ENST00000406949 CKS1BP61024 79 aa9.22□□□□□ -0.93
PCNX4-204ENST00000406949 OR1N2Q8NGR9 330 aa9.22□□□□□ -0.93
PCNX4-204ENST00000406949 OR10J6PQ8NGY7 276 aa9.22□□□□□ -0.93
PCNX4-204ENST00000406949 IGKV3-20P01619 116 aa9.22□□□□□ -0.93
PCNX4-204ENST00000406949 HBDP02042 147 aa9.22□□□□□ -0.93
PCNX4-204ENST00000406949 DEFB1P60022 68 aa9.22□□□□□ -0.93
PCNX4-204ENST00000406949 C8orf86Q6ZUL3 223 aa9.22□□□□□ -0.93
PCNX4-204ENST00000406949 BUB3O43684 328 aa9.22□□□□□ -0.93
PCNX4-204ENST00000406949 LEPP41159 167 aa9.22□□□□□ -0.93
PCNX4-204ENST00000406949 TM4SF20Q53R12 229 aa9.22□□□□□ -0.93
PCNX4-204ENST00000406949 MAPK1IP1LQ8NDC0 245 aa9.22□□□□□ -0.93
PCNX4-204ENST00000406949 SMAD5-AS1Q9Y6J3 95 aa9.22□□□□□ -0.93
PCNX4-204ENST00000406949 A1L4Q6 167 aa9.21□□□□□ -0.93
PCNX4-204ENST00000406949 C7orf71A4D174 169 aa9.21□□□□□ -0.93
PCNX4-204ENST00000406949 GATA1P15976 413 aaPredicted RBP9.21□□□□□ -0.93
PCNX4-204ENST00000406949 FASNP49327 2511 aaKnown RBP9.21□□□□□ -0.93
PCNX4-204ENST00000406949 TRBV7-1A0A0A6YYK4 115 aa9.21□□□□□ -0.94
PCNX4-204ENST00000406949 MRPS12O15235 138 aaKnown RBP9.21□□□□□ -0.94
PCNX4-204ENST00000406949 IGHV4-38-2P0DP08 117 aa9.21□□□□□ -0.94
PCNX4-204ENST00000406949 IFI27L1Q96BM0 104 aa9.21□□□□□ -0.94
PCNX4-204ENST00000406949 CCDC140Q96MF4 163 aa9.21□□□□□ -0.94
PCNX4-204ENST00000406949 AGPAT4-IT1Q9H0P7 198 aa9.21□□□□□ -0.94
PCNX4-204ENST00000406949 DOPEY1Q5JWR5 2465 aa9.21□□□□□ -0.94
PCNX4-204ENST00000406949 IGHV1-69DA0A0B4J2H0 117 aa9.21□□□□□ -0.94
PCNX4-204ENST00000406949 IGHV1-69P01742 117 aa9.21□□□□□ -0.94
PCNX4-204ENST00000406949 Q8N6K4 173 aa9.21□□□□□ -0.94
PCNX4-204ENST00000406949 NRGNQ92686 78 aa9.21□□□□□ -0.94
PCNX4-204ENST00000406949 TRAV26-2A0A0B4J265 109 aa9.2□□□□□ -0.94
PCNX4-204ENST00000406949 FCER1GP30273 86 aa9.2□□□□□ -0.94
PCNX4-204ENST00000406949 FOXE3Q13461 319 aa9.2□□□□□ -0.94
PCNX4-204ENST00000406949 KHDC1LQ5JSQ8 128 aa9.2□□□□□ -0.94
PCNX4-204ENST00000406949 HERV-K104P63124 156 aa9.2□□□□□ -0.94
PCNX4-204ENST00000406949 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa9.2□□□□□ -0.94
PCNX4-204ENST00000406949 C12orf54Q6X4T0 127 aa9.2□□□□□ -0.94
PCNX4-204ENST00000406949 ZNF747Q9BV97 191 aa9.2□□□□□ -0.94
PCNX4-204ENST00000406949 HRNRQ86YZ3 2850 aaPredicted RBP9.2□□□□□ -0.94
PCNX4-204ENST00000406949 PPBPP02775 128 aa9.19□□□□□ -0.94
PCNX4-204ENST00000406949 RNASE4P34096 147 aaKnown RBP9.19□□□□□ -0.94
PCNX4-204ENST00000406949 MRPS16Q9Y3D3 137 aaKnown RBP9.19□□□□□ -0.94
PCNX4-204ENST00000406949 PHLDA3Q9Y5J5 127 aa9.19□□□□□ -0.94
PCNX4-204ENST00000406949 SAP30O75446 220 aa9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 90.1 ms