RNA–Protein interactions for RNA: ENST00000402667.1

DNMT3A-205, Transcript of DNA methyltransferase 3 alpha, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene DNMT3A, Length 2,300 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-205ENST00000402667 SMKR1H3BMG3 65 aa12.93□□□□□ -0.34
DNMT3A-205ENST00000402667 GATA3P23771 443 aa12.93□□□□□ -0.34
DNMT3A-205ENST00000402667 CKS2P33552 79 aa12.93□□□□□ -0.34
DNMT3A-205ENST00000402667 HNRNPA3P51991 378 aaKnown RBP12.93□□□□□ -0.34
DNMT3A-205ENST00000402667 LOXL1Q08397 574 aaPredicted RBP12.93□□□□□ -0.34
DNMT3A-205ENST00000402667 C9orf139Q6ZV77 190 aa12.93□□□□□ -0.34
DNMT3A-205ENST00000402667 GPHB5Q86YW7 130 aa12.93□□□□□ -0.34
DNMT3A-205ENST00000402667 OR4X2Q8NGF9 303 aa12.93□□□□□ -0.34
DNMT3A-205ENST00000402667 OR10AG1Q8NH19 301 aa12.93□□□□□ -0.34
DNMT3A-205ENST00000402667 IGLV1-40P01703 118 aa12.93□□□□□ -0.34
DNMT3A-205ENST00000402667 MCRIP2Q9BUT9 160 aaKnown RBP12.93□□□□□ -0.34
DNMT3A-205ENST00000402667 ZNF747Q9BV97 191 aa12.93□□□□□ -0.34
DNMT3A-205ENST00000402667 PPP1R14DQ9NXH3 145 aa12.93□□□□□ -0.34
DNMT3A-205ENST00000402667 ZNF124Q15973 351 aa12.92□□□□□ -0.34
DNMT3A-205ENST00000402667 RNF185Q96GF1 192 aa12.92□□□□□ -0.34
DNMT3A-205ENST00000402667 A0A096LNJ9 63 aa12.91□□□□□ -0.34
DNMT3A-205ENST00000402667 NPYP01303 97 aa12.91□□□□□ -0.34
DNMT3A-205ENST00000402667 SLC25A16P16260 332 aa12.91□□□□□ -0.34
DNMT3A-205ENST00000402667 NPFFR1Q9GZQ6 430 aa12.91□□□□□ -0.34
DNMT3A-205ENST00000402667 USP24Q9UPU5 2620 aa12.91□□□□□ -0.34
DNMT3A-205ENST00000402667 H0Y8G0 127 aa12.91□□□□□ -0.34
DNMT3A-205ENST00000402667 TSPOP30536 169 aa12.91□□□□□ -0.34
DNMT3A-205ENST00000402667 ZNF738Q8NE65 137 aa12.91□□□□□ -0.34
DNMT3A-205ENST00000402667 TMEM208Q9BTX3 173 aa12.91□□□□□ -0.34
DNMT3A-205ENST00000402667 A0A0G2JLM5 398 aa12.9□□□□□ -0.34
DNMT3A-205ENST00000402667 NCR2O95944 276 aa12.9□□□□□ -0.34
DNMT3A-205ENST00000402667 CFHR3Q02985 330 aa12.9□□□□□ -0.34
DNMT3A-205ENST00000402667 Q6ZQT7 251 aa12.9□□□□□ -0.34
DNMT3A-205ENST00000402667 ZFYVE26Q68DK2 2539 aa12.9□□□□□ -0.34
DNMT3A-205ENST00000402667 hDV102S1A0JD36 115 aa12.9□□□□□ -0.34
DNMT3A-205ENST00000402667 SOCS3O14543 225 aa12.9□□□□□ -0.34
DNMT3A-205ENST00000402667 TFPI2P48307 235 aa12.9□□□□□ -0.34
DNMT3A-205ENST00000402667 FOXE3Q13461 319 aa12.9□□□□□ -0.34
DNMT3A-205ENST00000402667 PRSS57Q6UWY2 283 aa12.9□□□□□ -0.34
DNMT3A-205ENST00000402667 LINC01356Q8N9X3 169 aa12.9□□□□□ -0.34
DNMT3A-205ENST00000402667 LAMTOR2Q9Y2Q5 125 aa12.9□□□□□ -0.34
DNMT3A-205ENST00000402667 LINC01545Q5VT33 79 aa12.89□□□□□ -0.35
DNMT3A-205ENST00000402667 CSMD2Q7Z408 3487 aa12.89□□□□□ -0.35
DNMT3A-205ENST00000402667 DEFB112Q30KQ8 113 aa12.89□□□□□ -0.35
DNMT3A-205ENST00000402667 BBC3Q96PG8 261 aaPredicted RBP12.89□□□□□ -0.35
DNMT3A-205ENST00000402667 ST20Q9HBF5 79 aa12.89□□□□□ -0.35
DNMT3A-205ENST00000402667 MRPS16Q9Y3D3 137 aaKnown RBP12.89□□□□□ -0.35
DNMT3A-205ENST00000402667 A0A096LNT2 108 aa12.88□□□□□ -0.35
DNMT3A-205ENST00000402667 IGHV4-59P01825 116 aa12.88□□□□□ -0.35
DNMT3A-205ENST00000402667 TMEM95Q3KNT9 176 aa12.88□□□□□ -0.35
DNMT3A-205ENST00000402667 PMCHL2Q9BQD1 86 aa12.88□□□□□ -0.35
DNMT3A-205ENST00000402667 FAM208BQ5VWN6 2430 aa12.88□□□□□ -0.35
DNMT3A-205ENST00000402667 IGHV7-4-1A0A0J9YVY3 117 aa12.88□□□□□ -0.35
DNMT3A-205ENST00000402667 DLEU1O43261 78 aa12.88□□□□□ -0.35
DNMT3A-205ENST00000402667 TCF21O43680 179 aa12.88□□□□□ -0.35
DNMT3A-205ENST00000402667 GAS8-AS1O95177 125 aa12.88□□□□□ -0.35
DNMT3A-205ENST00000402667 PPBPP02775 128 aa12.88□□□□□ -0.35
DNMT3A-205ENST00000402667 COL5A1-AS1Q5SY13 56 aa12.88□□□□□ -0.35
DNMT3A-205ENST00000402667 PRR9Q5T870 116 aa12.88□□□□□ -0.35
DNMT3A-205ENST00000402667 LINC00477Q96M19 166 aa12.88□□□□□ -0.35
DNMT3A-205ENST00000402667 LENEPQ9Y5L5 61 aa12.88□□□□□ -0.35
DNMT3A-205ENST00000402667 ZNF462Q96JM2 2506 aa12.87□□□□□ -0.35
DNMT3A-205ENST00000402667 USP9YO00507 2555 aaPredicted RBP12.87□□□□□ -0.35
DNMT3A-205ENST00000402667 FXYD7P58549 80 aa12.87□□□□□ -0.35
DNMT3A-205ENST00000402667 RPL11P62913 178 aaKnown RBP12.87□□□□□ -0.35
DNMT3A-205ENST00000402667 TM4SF20Q53R12 229 aa12.87□□□□□ -0.35
DNMT3A-205ENST00000402667 OVOL1O14753 267 aa12.87□□□□□ -0.35
DNMT3A-205ENST00000402667 COX6B1P14854 86 aa12.87□□□□□ -0.35
DNMT3A-205ENST00000402667 RHPN1-AS1Q9BWJ2 59 aa12.87□□□□□ -0.35
DNMT3A-205ENST00000402667 HSBP1L1C9JCN9 74 aa12.86□□□□□ -0.35
DNMT3A-205ENST00000402667 DEFB1P60022 68 aa12.86□□□□□ -0.35
DNMT3A-205ENST00000402667 MAPK1IP1LQ8NDC0 245 aa12.86□□□□□ -0.35
DNMT3A-205ENST00000402667 OR10J6PQ8NGY7 276 aa12.86□□□□□ -0.35
DNMT3A-205ENST00000402667 ZNF580Q9UK33 172 aa12.86□□□□□ -0.35
DNMT3A-205ENST00000402667 NPSP0C0P6 89 aa12.85□□□□□ -0.35
DNMT3A-205ENST00000402667 STPG4Q8N801 248 aa12.85□□□□□ -0.35
DNMT3A-205ENST00000402667 OR8A1Q8NGG7 326 aa12.85□□□□□ -0.35
DNMT3A-205ENST00000402667 ANKRD17O75179 2603 aaKnown RBP12.85□□□□□ -0.35
DNMT3A-205ENST00000402667 TGFAP01135 160 aa12.85□□□□□ -0.35
DNMT3A-205ENST00000402667 HBDP02042 147 aa12.85□□□□□ -0.35
DNMT3A-205ENST00000402667 EVI2AP22794 236 aa12.85□□□□□ -0.35
DNMT3A-205ENST00000402667 SRSF1Q07955 248 aaKnown RBP eCLIP12.85□□□□□ -0.358e-8■■■■□ 19.5
DNMT3A-205ENST00000402667 ZFAND2AQ8N6M9 145 aa12.85□□□□□ -0.35
DNMT3A-205ENST00000402667 MAP1LC3AQ9H492 121 aa12.85□□□□□ -0.35
DNMT3A-205ENST00000402667 DAZ1Q9NQZ3 744 aaKnown RBP12.85□□□□□ -0.35
DNMT3A-205ENST00000402667 PEF1Q9UBV8 284 aaKnown RBP12.85□□□□□ -0.35
DNMT3A-205ENST00000402667 IGKV3-7A0A075B6H7 116 aa12.84□□□□□ -0.35
DNMT3A-205ENST00000402667 J3KRW8 73 aa12.84□□□□□ -0.35
DNMT3A-205ENST00000402667 TNFRSF6BO95407 300 aa12.84□□□□□ -0.35
DNMT3A-205ENST00000402667 TP73-AS1Q9UF72 201 aa12.84□□□□□ -0.35
DNMT3A-205ENST00000402667 FBN2P35556 2912 aa12.84□□□□□ -0.35
DNMT3A-205ENST00000402667 POLQO75417 2590 aa12.84□□□□□ -0.35
DNMT3A-205ENST00000402667 A1L4Q6 167 aa12.84□□□□□ -0.35
DNMT3A-205ENST00000402667 J3QLI3 93 aa12.84□□□□□ -0.35
DNMT3A-205ENST00000402667 PSMB8P28062 276 aa12.84□□□□□ -0.35
DNMT3A-205ENST00000402667 SMPXQ9UHP9 88 aa12.84□□□□□ -0.35
DNMT3A-205ENST00000402667 GOLT1BQ9Y3E0 138 aa12.84□□□□□ -0.35
DNMT3A-205ENST00000402667 SELENOKQ9Y6D0 94 aa12.84□□□□□ -0.35
DNMT3A-205ENST00000402667 SNAI2O43623 268 aa12.83□□□□□ -0.36
DNMT3A-205ENST00000402667 GATA1P15976 413 aaPredicted RBP12.83□□□□□ -0.36
DNMT3A-205ENST00000402667 LRRK2Q5S007 2527 aa12.83□□□□□ -0.36
DNMT3A-205ENST00000402667 IGHV4-4A0A075B6R2 117 aa12.83□□□□□ -0.36
DNMT3A-205ENST00000402667 EDN2P20800 178 aa12.83□□□□□ -0.36
DNMT3A-205ENST00000402667 HINT1P49773 126 aaPredicted RBP12.83□□□□□ -0.36
DNMT3A-205ENST00000402667 GAGE1Q13065 139 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms