RNA–Protein interactions for RNA: ENST00000402555.2

HMGB1P20-201, Transcript of high mobility group box 1 pseudogene 20, humanhuman

BASIC

Gene HMGB1P20, Length 677 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P20-201ENST00000402555 FAM19A4Q96LR4 140 aa4.05□□□□□ -1.76
HMGB1P20-201ENST00000402555 HYLS1Q96M11 299 aa4.05□□□□□ -1.76
HMGB1P20-201ENST00000402555 LINC00477Q96M19 166 aa4.05□□□□□ -1.76
HMGB1P20-201ENST00000402555 C20orf144Q9BQM9 153 aa4.05□□□□□ -1.76
HMGB1P20-201ENST00000402555 Q9H3A6 140 aa4.05□□□□□ -1.76
HMGB1P20-201ENST00000402555 TP53TG3Q9ULZ0 132 aa4.05□□□□□ -1.76
HMGB1P20-201ENST00000402555 RPH3ALQ9UNE2 315 aa4.05□□□□□ -1.76
HMGB1P20-201ENST00000402555 FXYD6-FXYD2A0A087WZ82 144 aa4.04□□□□□ -1.76
HMGB1P20-201ENST00000402555 CBY3A6NI87 242 aa4.04□□□□□ -1.76
HMGB1P20-201ENST00000402555 SNURFLB1AK76 121 aa4.04□□□□□ -1.76
HMGB1P20-201ENST00000402555 ZNF324O75467 553 aaPredicted RBP4.04□□□□□ -1.76
HMGB1P20-201ENST00000402555 NUDT3O95989 172 aa4.04□□□□□ -1.76
HMGB1P20-201ENST00000402555 GPX1P07203 203 aa4.04□□□□□ -1.76
HMGB1P20-201ENST00000402555 GIPP09681 153 aaPredicted RBP4.04□□□□□ -1.76
HMGB1P20-201ENST00000402555 CRISP2P16562 243 aa4.04□□□□□ -1.76
HMGB1P20-201ENST00000402555 M6PRP20645 277 aa4.04□□□□□ -1.76
HMGB1P20-201ENST00000402555 ZNF138P52744 262 aa4.04□□□□□ -1.76
HMGB1P20-201ENST00000402555 TAS2R45P59539 299 aa4.04□□□□□ -1.76
HMGB1P20-201ENST00000402555 OR5I1Q13606 314 aa4.04□□□□□ -1.76
HMGB1P20-201ENST00000402555 ACOT6Q3I5F7 207 aaPredicted RBP4.04□□□□□ -1.76
HMGB1P20-201ENST00000402555 KHDC3LQ587J8 217 aa4.04□□□□□ -1.76
HMGB1P20-201ENST00000402555 Q6ZTI0 123 aa4.04□□□□□ -1.76
HMGB1P20-201ENST00000402555 OR10G4Q8NGN3 311 aa4.04□□□□□ -1.76
HMGB1P20-201ENST00000402555 OR10G9Q8NGN4 311 aa4.04□□□□□ -1.76
HMGB1P20-201ENST00000402555 OR10G7Q8NGN6 311 aa4.04□□□□□ -1.76
HMGB1P20-201ENST00000402555 AQP10Q96PS8 301 aa4.04□□□□□ -1.76
HMGB1P20-201ENST00000402555 PYGO2Q9BRQ0 406 aa4.04□□□□□ -1.76
HMGB1P20-201ENST00000402555 SH3BGRL3Q9H299 93 aa4.04□□□□□ -1.76
HMGB1P20-201ENST00000402555 GSN-AS1Q9NRJ2 163 aa4.04□□□□□ -1.76
HMGB1P20-201ENST00000402555 ZNF492Q9P255 531 aa4.04□□□□□ -1.76
HMGB1P20-201ENST00000402555 KLF12Q9Y4X4 402 aa4.04□□□□□ -1.76
HMGB1P20-201ENST00000402555 FAT2Q9NYQ8 4349 aa4.04□□□□□ -1.76
HMGB1P20-201ENST00000402555 TRAV26-1A0A087WT03 109 aa4.03□□□□□ -1.76
HMGB1P20-201ENST00000402555 TRGV1A0A0A0MS02 117 aa4.03□□□□□ -1.76
HMGB1P20-201ENST00000402555 A0A0J9YY99 117 aa4.03□□□□□ -1.76
HMGB1P20-201ENST00000402555 A0A1W2PPV4 95 aa4.03□□□□□ -1.76
HMGB1P20-201ENST00000402555 RNF222A6NCQ9 220 aa4.03□□□□□ -1.76
HMGB1P20-201ENST00000402555 PGPA6NDG6 321 aa4.03□□□□□ -1.76
HMGB1P20-201ENST00000402555 DIRC3C9JPN6 131 aa4.03□□□□□ -1.76
HMGB1P20-201ENST00000402555 G3V3Q6 166 aa4.03□□□□□ -1.76
HMGB1P20-201ENST00000402555 SMLR1H3BR10 107 aa4.03□□□□□ -1.76
HMGB1P20-201ENST00000402555 ARL14EPLP0DKL9 152 aa4.03□□□□□ -1.76
HMGB1P20-201ENST00000402555 ATP6V0CP27449 155 aa4.03□□□□□ -1.76
HMGB1P20-201ENST00000402555 CSN1S1P47710 185 aa4.03□□□□□ -1.76
HMGB1P20-201ENST00000402555 CDC34P49427 236 aaPredicted RBP4.03□□□□□ -1.76
HMGB1P20-201ENST00000402555 GNG5P63218 68 aa4.03□□□□□ -1.76
HMGB1P20-201ENST00000402555 RGS21Q2M5E4 152 aa4.03□□□□□ -1.76
HMGB1P20-201ENST00000402555 MUC21Q5SSG8 566 aa4.03□□□□□ -1.76
HMGB1P20-201ENST00000402555 RPL7L1Q6DKI1 246 aaKnown RBP4.03□□□□□ -1.76
HMGB1P20-201ENST00000402555 GOLT1AQ6ZVE7 132 aa4.03□□□□□ -1.76
HMGB1P20-201ENST00000402555 SSX7Q7RTT5 188 aa4.03□□□□□ -1.76
HMGB1P20-201ENST00000402555 EIF4E3Q8N5X7 224 aaKnown RBP4.03□□□□□ -1.76
HMGB1P20-201ENST00000402555 LINC00612Q8N6U2 182 aa4.03□□□□□ -1.76
HMGB1P20-201ENST00000402555 C15orf53Q8NAA6 179 aa4.03□□□□□ -1.76
HMGB1P20-201ENST00000402555 C11orf72Q8NBR9 251 aa4.03□□□□□ -1.76
HMGB1P20-201ENST00000402555 OR2T35Q8NGX2 323 aa4.03□□□□□ -1.76
HMGB1P20-201ENST00000402555 ATG101Q9BSB4 218 aa4.03□□□□□ -1.76
HMGB1P20-201ENST00000402555 TMPRSS5Q9H3S3 457 aa4.03□□□□□ -1.76
HMGB1P20-201ENST00000402555 MRPL16Q9NX20 251 aaKnown RBP4.03□□□□□ -1.76
HMGB1P20-201ENST00000402555 IGHV1OR15-1A0A075B7D0 117 aa4.02□□□□□ -1.77
HMGB1P20-201ENST00000402555 TRAV8-1A0A0A6YYK1 113 aa4.02□□□□□ -1.77
HMGB1P20-201ENST00000402555 RBAKDNA6NC62 111 aa4.02□□□□□ -1.77
HMGB1P20-201ENST00000402555 F6UZH7 168 aa4.02□□□□□ -1.77
HMGB1P20-201ENST00000402555 RTL8CO15255 209 aa4.02□□□□□ -1.77
HMGB1P20-201ENST00000402555 IGHV3-53P01767 116 aa4.02□□□□□ -1.77
HMGB1P20-201ENST00000402555 TCL1AP56279 114 aa4.02□□□□□ -1.77
HMGB1P20-201ENST00000402555 DAZ2Q13117 558 aaKnown RBP4.02□□□□□ -1.77
HMGB1P20-201ENST00000402555 ZNF266Q14584 549 aa4.02□□□□□ -1.77
HMGB1P20-201ENST00000402555 ANXA2RQ3ZCQ2 193 aa4.02□□□□□ -1.77
HMGB1P20-201ENST00000402555 RNF212Q495C1 297 aa4.02□□□□□ -1.77
HMGB1P20-201ENST00000402555 PQLC2Q6ZP29 291 aa4.02□□□□□ -1.77
HMGB1P20-201ENST00000402555 LYPD1Q8N2G4 141 aa4.02□□□□□ -1.77
HMGB1P20-201ENST00000402555 INO80EQ8NBZ0 244 aaPredicted RBP4.02□□□□□ -1.77
HMGB1P20-201ENST00000402555 ZNF680Q8NEM1 530 aa4.02□□□□□ -1.77
HMGB1P20-201ENST00000402555 OR2G3Q8NGZ4 309 aa4.02□□□□□ -1.77
HMGB1P20-201ENST00000402555 CMTM2Q8TAZ6 248 aa4.02□□□□□ -1.77
HMGB1P20-201ENST00000402555 RAB24Q969Q5 203 aa4.02□□□□□ -1.77
HMGB1P20-201ENST00000402555 TVP23CQ96ET8 276 aa4.02□□□□□ -1.77
HMGB1P20-201ENST00000402555 SGK494Q96LW2 274 aa4.02□□□□□ -1.77
HMGB1P20-201ENST00000402555 LINC00467Q9BRT7 94 aa4.02□□□□□ -1.77
HMGB1P20-201ENST00000402555 OTORQ9NRC9 128 aa4.02□□□□□ -1.77
HMGB1P20-201ENST00000402555 TNFSF18Q9UNG2 199 aa4.02□□□□□ -1.77
HMGB1P20-201ENST00000402555 PKHD1P08F94 4074 aa4.02□□□□□ -1.77
HMGB1P20-201ENST00000402555 HERC2O95714 4834 aa4.01□□□□□ -1.77
HMGB1P20-201ENST00000402555 TRGV2A0A075B6R0 118 aa4.01□□□□□ -1.77
HMGB1P20-201ENST00000402555 ARPC5O15511 151 aa4.01□□□□□ -1.77
HMGB1P20-201ENST00000402555 SPINK4O60575 86 aa4.01□□□□□ -1.77
HMGB1P20-201ENST00000402555 NMBP08949 121 aa4.01□□□□□ -1.77
HMGB1P20-201ENST00000402555 STAG3L2P0CL84 134 aa4.01□□□□□ -1.77
HMGB1P20-201ENST00000402555 STAG3L3P0CL85 134 aa4.01□□□□□ -1.77
HMGB1P20-201ENST00000402555 GCHFRP30047 84 aa4.01□□□□□ -1.77
HMGB1P20-201ENST00000402555 ZNF726P1Q15940 193 aa4.01□□□□□ -1.77
HMGB1P20-201ENST00000402555 TMEM183BQ1AE95 376 aa4.01□□□□□ -1.77
HMGB1P20-201ENST00000402555 LGALS9BQ3B8N2 356 aa4.01□□□□□ -1.77
HMGB1P20-201ENST00000402555 FAM74A1Q5RGS3 127 aa4.01□□□□□ -1.77
HMGB1P20-201ENST00000402555 Q6ZR54 194 aa4.01□□□□□ -1.77
HMGB1P20-201ENST00000402555 IQCF2Q8IXL9 164 aa4.01□□□□□ -1.77
HMGB1P20-201ENST00000402555 TMEM183AQ8IXX5 376 aa4.01□□□□□ -1.77
HMGB1P20-201ENST00000402555 RXFP4Q8TDU9 374 aa4.01□□□□□ -1.77
HMGB1P20-201ENST00000402555 GNPNAT1Q96EK6 184 aaPredicted RBP4.01□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms