RNA–Protein interactions for RNA: ENST00000402314.6

ATG3-202, Transcript of autophagy related 3, humanhuman

TSL 1 (best) BASIC

Gene ATG3, Length 3,010 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG3-202ENST00000402314 SHANK2-AS3Q9BTD1 123 aa10.97□□□□□ -0.65
ATG3-202ENST00000402314 WI2-2373I1.2A0A1W2PRP0 233 aa10.96□□□□□ -0.65
ATG3-202ENST00000402314 UTP20O75691 2785 aaKnown RBP10.96□□□□□ -0.65
ATG3-202ENST00000402314 OR11H6Q8NGC7 330 aa10.96□□□□□ -0.65
ATG3-202ENST00000402314 KLK15Q9H2R5 256 aa10.96□□□□□ -0.65
ATG3-202ENST00000402314 CENPEQ02224 2701 aa10.96□□□□□ -0.65
ATG3-202ENST00000402314 EGR2P11161 476 aaPredicted RBP10.96□□□□□ -0.66
ATG3-202ENST00000402314 KLRB1Q12918 225 aa10.96□□□□□ -0.66
ATG3-202ENST00000402314 C16orf54Q6UWD8 224 aa10.96□□□□□ -0.66
ATG3-202ENST00000402314 SIGLEC15Q6ZMC9 328 aa10.96□□□□□ -0.66
ATG3-202ENST00000402314 SPRY2O43597 315 aa10.95□□□□□ -0.66
ATG3-202ENST00000402314 ZNF80P51504 273 aaPredicted RBP10.95□□□□□ -0.66
ATG3-202ENST00000402314 C11orf71Q6IPW1 123 aa10.95□□□□□ -0.66
ATG3-202ENST00000402314 TRAV26-2A0A0B4J265 109 aa10.95□□□□□ -0.66
ATG3-202ENST00000402314 K7EQM0 130 aa10.95□□□□□ -0.66
ATG3-202ENST00000402314 NDUFA3O95167 84 aa10.95□□□□□ -0.66
ATG3-202ENST00000402314 PRTN3P24158 256 aa10.95□□□□□ -0.66
ATG3-202ENST00000402314 ZNF562Q6V9R5 426 aa10.95□□□□□ -0.66
ATG3-202ENST00000402314 TMEM8BA6NDV4 472 aa10.95□□□□□ -0.66
ATG3-202ENST00000402314 F8W735 103 aaPredicted RBP10.95□□□□□ -0.66
ATG3-202ENST00000402314 H3BRN7 92 aa10.95□□□□□ -0.66
ATG3-202ENST00000402314 ZNF479Q96JC4 524 aa10.95□□□□□ -0.66
ATG3-202ENST00000402314 IGHV3OR16-13A0A075B7E8 117 aa10.94□□□□□ -0.66
ATG3-202ENST00000402314 IGHV3-74A0A0B4J1X5 117 aa10.94□□□□□ -0.66
ATG3-202ENST00000402314 TGFAP01135 160 aa10.94□□□□□ -0.66
ATG3-202ENST00000402314 CD300EQ496F6 205 aaPredicted RBP10.94□□□□□ -0.66
ATG3-202ENST00000402314 TMEM158Q8WZ71 300 aa10.94□□□□□ -0.66
ATG3-202ENST00000402314 C20orf78Q9BR46 151 aa10.94□□□□□ -0.66
ATG3-202ENST00000402314 CACNA1AO00555 2505 aa10.94□□□□□ -0.66
ATG3-202ENST00000402314 TRAV26-1A0A087WT03 109 aa10.94□□□□□ -0.66
ATG3-202ENST00000402314 ODF3BA8MYP8 253 aa10.94□□□□□ -0.66
ATG3-202ENST00000402314 CKS1BP61024 79 aa10.94□□□□□ -0.66
ATG3-202ENST00000402314 SPANXB1Q9NS25 103 aaPredicted RBP10.94□□□□□ -0.66
ATG3-202ENST00000402314 HHLA3Q9XRX5 114 aa10.94□□□□□ -0.66
ATG3-202ENST00000402314 UBTD1Q9HAC8 227 aa10.93□□□□□ -0.66
ATG3-202ENST00000402314 TMEM14CQ9P0S9 112 aa10.93□□□□□ -0.66
ATG3-202ENST00000402314 ODF1Q14990 250 aa10.93□□□□□ -0.66
ATG3-202ENST00000402314 HIST1H4GQ99525 98 aa10.93□□□□□ -0.66
ATG3-202ENST00000402314 RNF5Q99942 180 aa10.93□□□□□ -0.66
ATG3-202ENST00000402314 CSPG4Q6UVK1 2322 aa10.93□□□□□ -0.66
ATG3-202ENST00000402314 IGLV11-55A0A075B6I3 123 aa10.93□□□□□ -0.66
ATG3-202ENST00000402314 IGLL5B9A064 214 aa10.93□□□□□ -0.66
ATG3-202ENST00000402314 MRPS12O15235 138 aaKnown RBP10.93□□□□□ -0.66
ATG3-202ENST00000402314 NPBQ8NG41 125 aa10.93□□□□□ -0.66
ATG3-202ENST00000402314 ATP6V0BQ99437 205 aa10.93□□□□□ -0.66
ATG3-202ENST00000402314 MRPL35Q9NZE8 188 aaKnown RBP10.93□□□□□ -0.66
ATG3-202ENST00000402314 ZFYVE26Q68DK2 2539 aa10.92□□□□□ -0.66
ATG3-202ENST00000402314 PIEZO1Q92508 2521 aa10.92□□□□□ -0.66
ATG3-202ENST00000402314 IGHV3OR16-10A0A075B7F0 116 aa10.92□□□□□ -0.66
ATG3-202ENST00000402314 IGHV3-66A0A0C4DH42 116 aa10.92□□□□□ -0.66
ATG3-202ENST00000402314 A0A1B0GWB2 263 aa10.92□□□□□ -0.66
ATG3-202ENST00000402314 EFNA4P52798 201 aa10.92□□□□□ -0.66
ATG3-202ENST00000402314 LINC01548A6NM66 108 aa10.92□□□□□ -0.66
ATG3-202ENST00000402314 IGKCP01834 107 aa10.92□□□□□ -0.66
ATG3-202ENST00000402314 HOXB4P17483 251 aaPredicted RBP10.92□□□□□ -0.66
ATG3-202ENST00000402314 ERCC8Q13216 396 aa10.92□□□□□ -0.66
ATG3-202ENST00000402314 C21orf62Q9NYP8 219 aa10.92□□□□□ -0.66
ATG3-202ENST00000402314 CSMD2Q7Z408 3487 aa10.92□□□□□ -0.66
ATG3-202ENST00000402314 ECSCRQ19T08 205 aa10.91□□□□□ -0.66
ATG3-202ENST00000402314 CEND1Q8N111 149 aa10.91□□□□□ -0.66
ATG3-202ENST00000402314 AAMDCQ9H7C9 122 aa10.91□□□□□ -0.66
ATG3-202ENST00000402314 A0A1B0GV72 72 aa10.91□□□□□ -0.66
ATG3-202ENST00000402314 J3KRW8 73 aa10.91□□□□□ -0.66
ATG3-202ENST00000402314 SMIM17P0DL12 118 aa10.91□□□□□ -0.66
ATG3-202ENST00000402314 MFAP4P55083 255 aa10.91□□□□□ -0.66
ATG3-202ENST00000402314 PHLDA1Q8WV24 401 aaPredicted RBP10.91□□□□□ -0.66
ATG3-202ENST00000402314 PTH2Q96A98 100 aa10.91□□□□□ -0.66
ATG3-202ENST00000402314 IGHV3-49A0A0A0MS15 119 aa10.9□□□□□ -0.66
ATG3-202ENST00000402314 Q6ZQT7 251 aa10.9□□□□□ -0.66
ATG3-202ENST00000402314 MAP1LC3AQ9H492 121 aa10.9□□□□□ -0.66
ATG3-202ENST00000402314 USP9YO00507 2555 aaPredicted RBP10.9□□□□□ -0.66
ATG3-202ENST00000402314 POLQO75417 2590 aa10.9□□□□□ -0.66
ATG3-202ENST00000402314 MYO18BQ8IUG5 2567 aa10.9□□□□□ -0.66
ATG3-202ENST00000402314 M0R1W7 72 aa10.9□□□□□ -0.66
ATG3-202ENST00000402314 ZNF418Q8TF45 676 aaPredicted RBP10.9□□□□□ -0.66
ATG3-202ENST00000402314 GLMPQ8WWB7 406 aa10.9□□□□□ -0.66
ATG3-202ENST00000402314 CYSLTR1Q9Y271 337 aa10.9□□□□□ -0.66
ATG3-202ENST00000402314 UFC1Q9Y3C8 167 aa10.9□□□□□ -0.66
ATG3-202ENST00000402314 USP9XQ93008 2570 aaPredicted RBP10.9□□□□□ -0.66
ATG3-202ENST00000402314 IGHV7-81A0A0B4J1V7 117 aa10.9□□□□□ -0.67
ATG3-202ENST00000402314 SIVA1O15304 175 aa10.9□□□□□ -0.67
ATG3-202ENST00000402314 TNFRSF6BO95407 300 aa10.9□□□□□ -0.67
ATG3-202ENST00000402314 PAX8Q06710 450 aa10.9□□□□□ -0.67
ATG3-202ENST00000402314 FOXI2Q6ZQN5 318 aa10.9□□□□□ -0.67
ATG3-202ENST00000402314 G3V318 75 aa10.89□□□□□ -0.67
ATG3-202ENST00000402314 CTSGP08311 255 aa10.89□□□□□ -0.67
ATG3-202ENST00000402314 C12orf74Q32Q52 190 aa10.89□□□□□ -0.67
ATG3-202ENST00000402314 GAGE13Q4V321 117 aa10.89□□□□□ -0.67
ATG3-202ENST00000402314 ZNF493Q6ZR52 646 aa10.89□□□□□ -0.67
ATG3-202ENST00000402314 DPF1Q92782 380 aa10.89□□□□□ -0.67
ATG3-202ENST00000402314 LINC00527Q9UJ94 153 aa10.89□□□□□ -0.67
ATG3-202ENST00000402314 ABCA2Q9BZC7 2435 aa10.88□□□□□ -0.67
ATG3-202ENST00000402314 C19orf84I3L1E1 186 aa10.88□□□□□ -0.67
ATG3-202ENST00000402314 CRYBA4P53673 196 aa10.88□□□□□ -0.67
ATG3-202ENST00000402314 BPESC1Q9GZL8 116 aa10.88□□□□□ -0.67
ATG3-202ENST00000402314 LOC107984156A0A0G2JMH3 177 aa10.88□□□□□ -0.67
ATG3-202ENST00000402314 TRGV3P03979 118 aa10.88□□□□□ -0.67
ATG3-202ENST00000402314 ARL17AQ8IVW1 177 aa10.88□□□□□ -0.67
ATG3-202ENST00000402314 RNF182Q8N6D2 247 aa10.88□□□□□ -0.67
ATG3-202ENST00000402314 SRSF8Q9BRL6 282 aaKnown RBP10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms