RNA–Protein interactions for RNA: ENST00000399953.7

NPRL3-201, Transcript of NPR3 like, GATOR1 complex subunit, humanhuman

TSL 1 (best) BASIC

Gene NPRL3, Length 2,784 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPRL3-201ENST00000399953 RPL13AP40429 203 aaKnown RBP12.9□□□□□ -0.34
NPRL3-201ENST00000399953 TMEM155Q4W5P6 130 aa12.9□□□□□ -0.34
NPRL3-201ENST00000399953 PRO1854Q9UHT4 67 aa12.9□□□□□ -0.34
NPRL3-201ENST00000399953 DUSP14O95147 198 aaKnown RBP12.9□□□□□ -0.34
NPRL3-201ENST00000399953 COX6B1P14854 86 aa12.9□□□□□ -0.34
NPRL3-201ENST00000399953 SLC25A16P16260 332 aa12.9□□□□□ -0.34
NPRL3-201ENST00000399953 FOXC1Q12948 553 aa12.9□□□□□ -0.34
NPRL3-201ENST00000399953 TDHQ8IZJ6 230 aa12.9□□□□□ -0.34
NPRL3-201ENST00000399953 H3BRN7 92 aa12.89□□□□□ -0.35
NPRL3-201ENST00000399953 VMA21Q3ZAQ7 101 aa12.89□□□□□ -0.35
NPRL3-201ENST00000399953 DUX4L9Q6RFH8 374 aaPredicted RBP12.89□□□□□ -0.35
NPRL3-201ENST00000399953 TTTY12Q9BZ98 90 aa12.89□□□□□ -0.35
NPRL3-201ENST00000399953 CTSZQ9UBR2 303 aa12.89□□□□□ -0.35
NPRL3-201ENST00000399953 SMIM9A6NGZ8 99 aa12.89□□□□□ -0.35
NPRL3-201ENST00000399953 PF4V1P10720 104 aa12.89□□□□□ -0.35
NPRL3-201ENST00000399953 TRPT1Q86TN4 253 aaKnown RBP12.89□□□□□ -0.35
NPRL3-201ENST00000399953 SRSF2Q01130 221 aaKnown RBP12.88□□□□□ -0.35
NPRL3-201ENST00000399953 HES7Q9BYE0 225 aa12.88□□□□□ -0.35
NPRL3-201ENST00000399953 TPSG1Q9NRR2 321 aa12.88□□□□□ -0.35
NPRL3-201ENST00000399953 TTC28Q96AY4 2481 aa12.88□□□□□ -0.35
NPRL3-201ENST00000399953 BDP1A6H8Y1 2624 aa12.88□□□□□ -0.35
NPRL3-201ENST00000399953 PRR14LQ5THK1 2151 aa12.88□□□□□ -0.35
NPRL3-201ENST00000399953 TM4SF5O14894 197 aa12.88□□□□□ -0.35
NPRL3-201ENST00000399953 PLXNB1O43157 2135 aa12.88□□□□□ -0.35
NPRL3-201ENST00000399953 ORM1P02763 201 aa12.87□□□□□ -0.35
NPRL3-201ENST00000399953 ZNF80P51504 273 aaPredicted RBP12.87□□□□□ -0.35
NPRL3-201ENST00000399953 IGF2-ASQ6U949 168 aa12.87□□□□□ -0.35
NPRL3-201ENST00000399953 ZNF575Q86XF7 245 aa12.87□□□□□ -0.35
NPRL3-201ENST00000399953 NEXN-AS1Q8NBZ9 246 aa12.87□□□□□ -0.35
NPRL3-201ENST00000399953 DMXL1Q9Y485 3027 aa12.87□□□□□ -0.35
NPRL3-201ENST00000399953 A0A0J9YY99 117 aa12.87□□□□□ -0.35
NPRL3-201ENST00000399953 TIMM23O14925 209 aa12.87□□□□□ -0.35
NPRL3-201ENST00000399953 IGKV3-15P01624 115 aa12.87□□□□□ -0.35
NPRL3-201ENST00000399953 TEX49A0A1B0GTD5 131 aa12.86□□□□□ -0.35
NPRL3-201ENST00000399953 K7ESF4 209 aa12.86□□□□□ -0.35
NPRL3-201ENST00000399953 MRPS12O15235 138 aaKnown RBP12.86□□□□□ -0.35
NPRL3-201ENST00000399953 WIPF1O43516 503 aa12.86□□□□□ -0.35
NPRL3-201ENST00000399953 APELAP0DMC3 54 aa12.86□□□□□ -0.35
NPRL3-201ENST00000399953 PDE6HQ13956 83 aa12.86□□□□□ -0.35
NPRL3-201ENST00000399953 FAM201AQ5SY85 155 aa12.86□□□□□ -0.35
NPRL3-201ENST00000399953 NRACQ8N912 160 aa12.86□□□□□ -0.35
NPRL3-201ENST00000399953 LINC01600Q96MT4 127 aa12.86□□□□□ -0.35
NPRL3-201ENST00000399953 SCGB3A1Q96QR1 104 aa12.86□□□□□ -0.35
NPRL3-201ENST00000399953 IGKV2-40A0A087WW87 121 aaPredicted RBP12.86□□□□□ -0.35
NPRL3-201ENST00000399953 LY6G6EA0A0G2JKS1 128 aa12.86□□□□□ -0.35
NPRL3-201ENST00000399953 LHBP01229 141 aa12.86□□□□□ -0.35
NPRL3-201ENST00000399953 IGKV2D-40P01614 121 aaPredicted RBP12.86□□□□□ -0.35
NPRL3-201ENST00000399953 IGHV3-30P01768 117 aa12.86□□□□□ -0.35
NPRL3-201ENST00000399953 IGHV3-30-5P0DP03 117 aa12.86□□□□□ -0.35
NPRL3-201ENST00000399953 TIMD4Q96H15 378 aa12.86□□□□□ -0.35
NPRL3-201ENST00000399953 U3KQA8 63 aa12.86□□□□□ -0.35
NPRL3-201ENST00000399953 LGALS9O00182 355 aa12.86□□□□□ -0.35
NPRL3-201ENST00000399953 RPL27AP46776 148 aaKnown RBP12.85□□□□□ -0.35
NPRL3-201ENST00000399953 KLHL30-AS1Q8NEE0 82 aa12.85□□□□□ -0.35
NPRL3-201ENST00000399953 EP300Q09472 2414 aaPredicted RBP12.85□□□□□ -0.35
NPRL3-201ENST00000399953 TRAV25A0A0B4J276 109 aa12.85□□□□□ -0.35
NPRL3-201ENST00000399953 H3BMM0 161 aa12.85□□□□□ -0.35
NPRL3-201ENST00000399953 WT1P19544 449 aaPredicted RBP12.85□□□□□ -0.35
NPRL3-201ENST00000399953 GLRXP35754 106 aa12.85□□□□□ -0.35
NPRL3-201ENST00000399953 HES1Q14469 280 aa12.85□□□□□ -0.35
NPRL3-201ENST00000399953 MRGPRG-AS1Q2M3A8 158 aa12.85□□□□□ -0.35
NPRL3-201ENST00000399953 UBE2WQ96B02 151 aa12.85□□□□□ -0.35
NPRL3-201ENST00000399953 P0DMU3 169 aa12.84□□□□□ -0.35
NPRL3-201ENST00000399953 FAM231AP0DMU4 169 aa12.84□□□□□ -0.35
NPRL3-201ENST00000399953 FAM231CP0DMU5 169 aa12.84□□□□□ -0.35
NPRL3-201ENST00000399953 LOC107984640A0A0U1RRK4 108 aa12.84□□□□□ -0.35
NPRL3-201ENST00000399953 M0R2P5 195 aa12.84□□□□□ -0.35
NPRL3-201ENST00000399953 CECR9P0C854 216 aa12.84□□□□□ -0.35
NPRL3-201ENST00000399953 ATXN8Q156A1 80 aa12.84□□□□□ -0.35
NPRL3-201ENST00000399953 LINC01620Q4KN68 170 aa12.84□□□□□ -0.35
NPRL3-201ENST00000399953 LRRC75A-AS1Q8N1F1 130 aa12.84□□□□□ -0.35
NPRL3-201ENST00000399953 BAALCQ8WXS3 180 aa12.84□□□□□ -0.35
NPRL3-201ENST00000399953 SIGLEC9Q9Y336 463 aa12.84□□□□□ -0.35
NPRL3-201ENST00000399953 SPTBN2O15020 2390 aa12.84□□□□□ -0.35
NPRL3-201ENST00000399953 TRBV7-7A0A0K0K1E9 115 aa12.83□□□□□ -0.36
NPRL3-201ENST00000399953 IGKV1-17P01599 117 aa12.83□□□□□ -0.36
NPRL3-201ENST00000399953 CCL4P13236 92 aa12.83□□□□□ -0.36
NPRL3-201ENST00000399953 Q8TAT8 98 aa12.83□□□□□ -0.36
NPRL3-201ENST00000399953 PSMG3-AS1Q96PY0 264 aa12.83□□□□□ -0.36
NPRL3-201ENST00000399953 CFIP05156 583 aa12.83□□□□□ -0.36
NPRL3-201ENST00000399953 IL17RELQ6ZVW7 336 aa12.83□□□□□ -0.36
NPRL3-201ENST00000399953 KLK15Q9H2R5 256 aa12.83□□□□□ -0.36
NPRL3-201ENST00000399953 J3KT08 172 aa12.82□□□□□ -0.36
NPRL3-201ENST00000399953 RPL7P18124 248 aaKnown RBP12.82□□□□□ -0.36
NPRL3-201ENST00000399953 TOMM6Q96B49 74 aa12.82□□□□□ -0.36
NPRL3-201ENST00000399953 GAFA1Q96PS6 74 aa12.82□□□□□ -0.36
NPRL3-201ENST00000399953 RAI1Q7Z5J4 1906 aaPredicted RBP12.82□□□□□ -0.36
NPRL3-201ENST00000399953 NDUFA7O95182 113 aa12.82□□□□□ -0.36
NPRL3-201ENST00000399953 ZNF56Q15929 161 aa12.82□□□□□ -0.36
NPRL3-201ENST00000399953 ORMDL2Q53FV1 153 aa12.82□□□□□ -0.36
NPRL3-201ENST00000399953 C9orf153Q5TBE3 101 aa12.82□□□□□ -0.36
NPRL3-201ENST00000399953 TRAV26-2A0A0B4J265 109 aa12.81□□□□□ -0.36
NPRL3-201ENST00000399953 NPFFO15130 113 aa12.81□□□□□ -0.36
NPRL3-201ENST00000399953 TRGV3P03979 118 aa12.81□□□□□ -0.36
NPRL3-201ENST00000399953 TRBV10-2A0A0K0K1G8 114 aa12.81□□□□□ -0.36
NPRL3-201ENST00000399953 LPAL2Q16609 132 aa12.81□□□□□ -0.36
NPRL3-201ENST00000399953 FAM216BQ8N7L0 139 aa12.81□□□□□ -0.36
NPRL3-201ENST00000399953 SLC25A29Q8N8R3 303 aa12.81□□□□□ -0.36
NPRL3-201ENST00000399953 CCL13Q99616 98 aa12.81□□□□□ -0.36
NPRL3-201ENST00000399953 IGHV3-33P01772 117 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms