RNA–Protein interactions for RNA: ENST00000398431.2

TFF3-202, Transcript of trefoil factor 3, humanhuman

TSL 3

Gene TFF3, Length 452 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFF3-202ENST00000398431 ACTR3CQ9C0K3 210 aaPredicted RBP8.39□□□□□ -1.07
TFF3-202ENST00000398431 GNG13Q9P2W3 67 aa8.39□□□□□ -1.07
TFF3-202ENST00000398431 APOBP04114 4563 aaKnown RBP8.38□□□□□ -1.07
TFF3-202ENST00000398431 MAP1LC3B2A6NCE7 125 aa8.38□□□□□ -1.07
TFF3-202ENST00000398431 H3BRN7 92 aa8.38□□□□□ -1.07
TFF3-202ENST00000398431 ATP5G1P05496 136 aa8.38□□□□□ -1.07
TFF3-202ENST00000398431 PRB4P10163 310 aaPredicted RBP8.38□□□□□ -1.07
TFF3-202ENST00000398431 AKR1C3P42330 323 aa8.38□□□□□ -1.07
TFF3-202ENST00000398431 RPL35P42766 123 aaKnown RBP8.38□□□□□ -1.07
TFF3-202ENST00000398431 ATP5G3P48201 142 aa8.38□□□□□ -1.07
TFF3-202ENST00000398431 S100A12P80511 92 aa8.38□□□□□ -1.07
TFF3-202ENST00000398431 TMEM144Q7Z5S9 345 aa8.38□□□□□ -1.07
TFF3-202ENST00000398431 GPR82Q96P67 336 aa8.38□□□□□ -1.07
TFF3-202ENST00000398431 LINC01587Q99440 93 aa8.38□□□□□ -1.07
TFF3-202ENST00000398431 MAP1LC3BQ9GZQ8 125 aa8.38□□□□□ -1.07
TFF3-202ENST00000398431 CTDSP1Q9GZU7 261 aa8.38□□□□□ -1.07
TFF3-202ENST00000398431 MANBALQ9NQG1 85 aa8.38□□□□□ -1.07
TFF3-202ENST00000398431 KCNIP2Q9NS61 270 aa8.38□□□□□ -1.07
TFF3-202ENST00000398431 TMEM242Q9NWH2 141 aa8.38□□□□□ -1.07
TFF3-202ENST00000398431 DNAH5Q8TE73 4624 aa8.37□□□□□ -1.07
TFF3-202ENST00000398431 CTXND1A0A1B0GTU2 59 aa8.37□□□□□ -1.07
TFF3-202ENST00000398431 UBE2L5PA0A1B0GUS4 154 aa8.37□□□□□ -1.07
TFF3-202ENST00000398431 MPDU1O75352 247 aa8.37□□□□□ -1.07
TFF3-202ENST00000398431 CCL18P55774 89 aa8.37□□□□□ -1.07
TFF3-202ENST00000398431 ACOT6Q3I5F7 207 aaPredicted RBP8.37□□□□□ -1.07
TFF3-202ENST00000398431 LCN15Q6UWW0 184 aa8.37□□□□□ -1.07
TFF3-202ENST00000398431 ZFP82Q8N141 532 aa8.37□□□□□ -1.07
TFF3-202ENST00000398431 Q8N1X5 172 aa8.37□□□□□ -1.07
TFF3-202ENST00000398431 CYB561D1Q8N8Q1 229 aa8.37□□□□□ -1.07
TFF3-202ENST00000398431 OR8A1Q8NGG7 326 aa8.37□□□□□ -1.07
TFF3-202ENST00000398431 SHANK2-AS3Q9BTD1 123 aa8.37□□□□□ -1.07
TFF3-202ENST00000398431 KRTAP1-5Q9BYS1 174 aa8.37□□□□□ -1.07
TFF3-202ENST00000398431 MRPS12O15235 138 aaKnown RBP8.36□□□□□ -1.07
TFF3-202ENST00000398431 FGF7P21781 194 aa8.36□□□□□ -1.07
TFF3-202ENST00000398431 TAS2R60P59551 318 aa8.36□□□□□ -1.07
TFF3-202ENST00000398431 PLP1P60201 277 aa8.36□□□□□ -1.07
TFF3-202ENST00000398431 KIR3DS1Q14943 382 aa8.36□□□□□ -1.07
TFF3-202ENST00000398431 PSG3Q16557 428 aa8.36□□□□□ -1.07
TFF3-202ENST00000398431 PATE2Q6UY27 113 aa8.36□□□□□ -1.07
TFF3-202ENST00000398431 CYP2G1PQ6ZSU1 146 aa8.36□□□□□ -1.07
TFF3-202ENST00000398431 SSX7Q7RTT5 188 aa8.36□□□□□ -1.07
TFF3-202ENST00000398431 ZNF738Q8NE65 137 aa8.36□□□□□ -1.07
TFF3-202ENST00000398431 Q9H8V8 135 aa8.36□□□□□ -1.07
TFF3-202ENST00000398431 NPVFQ9HCQ7 196 aa8.36□□□□□ -1.07
TFF3-202ENST00000398431 WDR83OSQ9Y284 106 aa8.36□□□□□ -1.07
TFF3-202ENST00000398431 A0A087X0K7 114 aa8.35□□□□□ -1.07
TFF3-202ENST00000398431 SMCO3A2RU48 225 aa8.35□□□□□ -1.07
TFF3-202ENST00000398431 C5orf52A6NGY3 159 aa8.35□□□□□ -1.07
TFF3-202ENST00000398431 ZNF727A8MUV8 499 aa8.35□□□□□ -1.07
TFF3-202ENST00000398431 TMEM250H0YL14 139 aa8.35□□□□□ -1.07
TFF3-202ENST00000398431 SMIM6P0DI80 62 aa8.35□□□□□ -1.07
TFF3-202ENST00000398431 HTN1P15515 57 aa8.35□□□□□ -1.07
TFF3-202ENST00000398431 RPS10P46783 165 aaKnown RBP8.35□□□□□ -1.07
TFF3-202ENST00000398431 KRTAP10-2P60368 255 aa8.35□□□□□ -1.07
TFF3-202ENST00000398431 SNRPEP62304 92 aaKnown RBP8.35□□□□□ -1.07
TFF3-202ENST00000398431 RHOBP62745 196 aa8.35□□□□□ -1.07
TFF3-202ENST00000398431 HIST1H1AQ02539 215 aaPredicted RBP8.35□□□□□ -1.07
TFF3-202ENST00000398431 SPATA12Q7Z6I5 190 aa8.35□□□□□ -1.07
TFF3-202ENST00000398431 IQCF2Q8IXL9 164 aa8.35□□□□□ -1.07
TFF3-202ENST00000398431 TMEM256Q8N2U0 113 aa8.35□□□□□ -1.07
TFF3-202ENST00000398431 LINC00612Q8N6U2 182 aa8.35□□□□□ -1.07
TFF3-202ENST00000398431 OR10G9Q8NGN4 311 aa8.35□□□□□ -1.07
TFF3-202ENST00000398431 OR10G7Q8NGN6 311 aa8.35□□□□□ -1.07
TFF3-202ENST00000398431 RNASE8Q8TDE3 154 aaKnown RBP8.35□□□□□ -1.07
TFF3-202ENST00000398431 ISOC2Q96AB3 205 aa8.35□□□□□ -1.07
TFF3-202ENST00000398431 UHRF2Q96PU4 802 aa8.35□□□□□ -1.07
TFF3-202ENST00000398431 C12orf57Q99622 126 aa8.35□□□□□ -1.07
TFF3-202ENST00000398431 MGST2Q99735 147 aa8.35□□□□□ -1.07
TFF3-202ENST00000398431 NOP10Q9NPE3 64 aaKnown RBP8.35□□□□□ -1.07
TFF3-202ENST00000398431 NAT8Q9UHE5 227 aa8.35□□□□□ -1.07
TFF3-202ENST00000398431 TIMM8BQ9Y5J9 83 aaPredicted RBP8.35□□□□□ -1.07
TFF3-202ENST00000398431 HYPMO75409 117 aa8.34□□□□□ -1.07
TFF3-202ENST00000398431 RPL7P18124 248 aaKnown RBP8.34□□□□□ -1.07
TFF3-202ENST00000398431 S100PP25815 95 aa8.34□□□□□ -1.07
TFF3-202ENST00000398431 RAB31Q13636 194 aa8.34□□□□□ -1.07
TFF3-202ENST00000398431 TMEM241Q24JQ0 296 aa8.34□□□□□ -1.07
TFF3-202ENST00000398431 FFAR4Q5NUL3 377 aa8.34□□□□□ -1.07
TFF3-202ENST00000398431 TEPPQ6URK8 271 aa8.34□□□□□ -1.07
TFF3-202ENST00000398431 ZNF493Q6ZR52 646 aa8.34□□□□□ -1.07
TFF3-202ENST00000398431 C16orf74Q96GX8 76 aa8.34□□□□□ -1.07
TFF3-202ENST00000398431 BTF3L4Q96K17 158 aa8.34□□□□□ -1.07
TFF3-202ENST00000398431 TXNDC17Q9BRA2 123 aa8.34□□□□□ -1.07
TFF3-202ENST00000398431 HIGD1AQ9Y241 93 aa8.34□□□□□ -1.07
TFF3-202ENST00000398431 A0A1W2PPV4 95 aa8.33□□□□□ -1.08
TFF3-202ENST00000398431 LINC00869P0C866 280 aa8.33□□□□□ -1.08
TFF3-202ENST00000398431 HOXA5P20719 270 aa8.33□□□□□ -1.08
TFF3-202ENST00000398431 S100A7P31151 101 aa8.33□□□□□ -1.08
TFF3-202ENST00000398431 CDKN1BP46527 198 aa8.33□□□□□ -1.08
TFF3-202ENST00000398431 MEF2BQ02080 365 aaPredicted RBP8.33□□□□□ -1.08
TFF3-202ENST00000398431 ESRGQ1W209 222 aa8.33□□□□□ -1.08
TFF3-202ENST00000398431 ZNF674Q2M3X9 581 aa8.33□□□□□ -1.08
TFF3-202ENST00000398431 RPUSD4Q96CM3 377 aaKnown RBP8.33□□□□□ -1.08
TFF3-202ENST00000398431 SCRT2Q9NQ03 307 aa8.33□□□□□ -1.08
TFF3-202ENST00000398431 TRAV26-1A0A087WT03 109 aa8.32□□□□□ -1.08
TFF3-202ENST00000398431 PRAC2D3DTV9 90 aa8.32□□□□□ -1.08
TFF3-202ENST00000398431 OR5G3P0C626 314 aa8.32□□□□□ -1.08
TFF3-202ENST00000398431 FGF8P55075 233 aaPredicted RBP8.32□□□□□ -1.08
TFF3-202ENST00000398431 FABP9Q0Z7S8 132 aa8.32□□□□□ -1.08
TFF3-202ENST00000398431 OR5I1Q13606 314 aa8.32□□□□□ -1.08
TFF3-202ENST00000398431 TMEM263Q8WUH6 116 aaKnown RBP8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms