RNA–Protein interactions for RNA: ENST00000397998.7

CSGALNACT1-202, Transcript of chondroitin sulfate N-acetylgalactosaminyltransferase 1, humanhuman

TSL 2

Gene CSGALNACT1, Length 3,962 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSGALNACT1-202ENST00000397998 H7C1H1 209 aa8.72□□□□□ -1.01
CSGALNACT1-202ENST00000397998 SPRY2O43597 315 aa8.72□□□□□ -1.01
CSGALNACT1-202ENST00000397998 FAM159AQ6UWV7 190 aa8.72□□□□□ -1.01
CSGALNACT1-202ENST00000397998 Q71RC1 249 aaPredicted RBP8.72□□□□□ -1.01
CSGALNACT1-202ENST00000397998 DYNAPQ8N1N2 210 aa8.72□□□□□ -1.01
CSGALNACT1-202ENST00000397998 C8orf31Q8N9H6 132 aa8.72□□□□□ -1.01
CSGALNACT1-202ENST00000397998 TMEM190Q8WZ59 177 aa8.72□□□□□ -1.01
CSGALNACT1-202ENST00000397998 ZNF256Q9Y2P7 627 aaPredicted RBP8.72□□□□□ -1.01
CSGALNACT1-202ENST00000397998 VPS13AQ96RL7 3174 aa8.72□□□□□ -1.01
CSGALNACT1-202ENST00000397998 PLNP26678 52 aa8.72□□□□□ -1.01
CSGALNACT1-202ENST00000397998 Q8N8P6 123 aa8.72□□□□□ -1.01
CSGALNACT1-202ENST00000397998 NPFFR1Q9GZQ6 430 aa8.72□□□□□ -1.01
CSGALNACT1-202ENST00000397998 C7orf69Q9H7B7 122 aa8.72□□□□□ -1.01
CSGALNACT1-202ENST00000397998 AZU1P20160 251 aa8.72□□□□□ -1.01
CSGALNACT1-202ENST00000397998 LINC01559Q495D7 138 aa8.72□□□□□ -1.01
CSGALNACT1-202ENST00000397998 SH2D6Q7Z4S9 175 aa8.72□□□□□ -1.01
CSGALNACT1-202ENST00000397998 CEND1Q8N111 149 aa8.71□□□□□ -1.01
CSGALNACT1-202ENST00000397998 THBDP07204 575 aa8.71□□□□□ -1.01
CSGALNACT1-202ENST00000397998 ZNF56Q15929 161 aa8.71□□□□□ -1.01
CSGALNACT1-202ENST00000397998 C2orf91Q6ZV80 131 aa8.71□□□□□ -1.01
CSGALNACT1-202ENST00000397998 IGLV1-47P01700 117 aa8.71□□□□□ -1.02
CSGALNACT1-202ENST00000397998 SRD5A1P18405 259 aa8.71□□□□□ -1.02
CSGALNACT1-202ENST00000397998 CRIP1P50238 77 aa8.71□□□□□ -1.02
CSGALNACT1-202ENST00000397998 TMEM219Q86XT9 240 aa8.71□□□□□ -1.02
CSGALNACT1-202ENST00000397998 NDUFS8O00217 210 aa8.71□□□□□ -1.02
CSGALNACT1-202ENST00000397998 TRAV21A0A0B4J279 112 aa8.7□□□□□ -1.02
CSGALNACT1-202ENST00000397998 G3V318 75 aa8.7□□□□□ -1.02
CSGALNACT1-202ENST00000397998 KHDC1LQ5JSQ8 128 aa8.7□□□□□ -1.02
CSGALNACT1-202ENST00000397998 IGFL3Q6UXB1 125 aa8.7□□□□□ -1.02
CSGALNACT1-202ENST00000397998 ARHGAP32A7KAX9 2087 aa8.7□□□□□ -1.02
CSGALNACT1-202ENST00000397998 GAGE12HA6NDE8 117 aa8.7□□□□□ -1.02
CSGALNACT1-202ENST00000397998 PRTN3P24158 256 aa8.7□□□□□ -1.02
CSGALNACT1-202ENST00000397998 WFDC2Q14508 124 aa8.7□□□□□ -1.02
CSGALNACT1-202ENST00000397998 DPF1Q92782 380 aa8.7□□□□□ -1.02
CSGALNACT1-202ENST00000397998 CFHR4Q92496 578 aa8.7□□□□□ -1.02
CSGALNACT1-202ENST00000397998 IGHV3-64A0A075B6Q5 118 aa8.69□□□□□ -1.02
CSGALNACT1-202ENST00000397998 CEACAM4O75871 244 aa8.69□□□□□ -1.02
CSGALNACT1-202ENST00000397998 IGLV2-11P01706 119 aa8.69□□□□□ -1.02
CSGALNACT1-202ENST00000397998 C12orf74Q32Q52 190 aa8.69□□□□□ -1.02
CSGALNACT1-202ENST00000397998 CKS1BP61024 79 aa8.69□□□□□ -1.02
CSGALNACT1-202ENST00000397998 SPOCK3Q9BQ16 436 aa8.69□□□□□ -1.02
CSGALNACT1-202ENST00000397998 LINC01549A6NIU2 74 aa8.69□□□□□ -1.02
CSGALNACT1-202ENST00000397998 PRAC2D3DTV9 90 aa8.69□□□□□ -1.02
CSGALNACT1-202ENST00000397998 G3V4G9 280 aa8.69□□□□□ -1.02
CSGALNACT1-202ENST00000397998 ZNF80P51504 273 aaPredicted RBP8.69□□□□□ -1.02
CSGALNACT1-202ENST00000397998 PAX8Q06710 450 aa8.69□□□□□ -1.02
CSGALNACT1-202ENST00000397998 AGPAT4-IT1Q9H0P7 198 aa8.69□□□□□ -1.02
CSGALNACT1-202ENST00000397998 ADAMTS20P59510 1910 aa8.68□□□□□ -1.02
CSGALNACT1-202ENST00000397998 SHISA9B4DS77 424 aa8.68□□□□□ -1.02
CSGALNACT1-202ENST00000397998 ID1P41134 155 aa8.68□□□□□ -1.02
CSGALNACT1-202ENST00000397998 DLX4Q92988 240 aaPredicted RBP8.68□□□□□ -1.02
CSGALNACT1-202ENST00000397998 F8W1H4 67 aa8.68□□□□□ -1.02
CSGALNACT1-202ENST00000397998 ATP6V0E1O15342 81 aa8.68□□□□□ -1.02
CSGALNACT1-202ENST00000397998 C2orf66Q6UXQ4 117 aa8.68□□□□□ -1.02
CSGALNACT1-202ENST00000397998 NEGR1Q7Z3B1 354 aa8.68□□□□□ -1.02
CSGALNACT1-202ENST00000397998 PPP1R17O96001 155 aa8.68□□□□□ -1.02
CSGALNACT1-202ENST00000397998 CD7P09564 240 aa8.68□□□□□ -1.02
CSGALNACT1-202ENST00000397998 SLC25A16P16260 332 aa8.68□□□□□ -1.02
CSGALNACT1-202ENST00000397998 ODF1Q14990 250 aa8.68□□□□□ -1.02
CSGALNACT1-202ENST00000397998 DGAT2L7PQ6IED9 249 aa8.68□□□□□ -1.02
CSGALNACT1-202ENST00000397998 ZNF493Q6ZR52 646 aa8.68□□□□□ -1.02
CSGALNACT1-202ENST00000397998 DPH3P1Q9H4G8 78 aa8.68□□□□□ -1.02
CSGALNACT1-202ENST00000397998 F8VRH5 84 aa8.67□□□□□ -1.02
CSGALNACT1-202ENST00000397998 SUMO2P61956 95 aaKnown RBP8.67□□□□□ -1.02
CSGALNACT1-202ENST00000397998 FOXE3Q13461 319 aa8.67□□□□□ -1.02
CSGALNACT1-202ENST00000397998 IGKV2D-26A0A0A0MRZ7 120 aa8.67□□□□□ -1.02
CSGALNACT1-202ENST00000397998 TRAV2A0A0B4J234 112 aa8.67□□□□□ -1.02
CSGALNACT1-202ENST00000397998 IGLL5B9A064 214 aa8.67□□□□□ -1.02
CSGALNACT1-202ENST00000397998 RPL13AP40429 203 aaKnown RBP8.67□□□□□ -1.02
CSGALNACT1-202ENST00000397998 PRADC1Q9BSG0 188 aa8.67□□□□□ -1.02
CSGALNACT1-202ENST00000397998 TRAV8-2A0A0B4J237 113 aa8.66□□□□□ -1.02
CSGALNACT1-202ENST00000397998 A8MWV9 139 aa8.66□□□□□ -1.02
CSGALNACT1-202ENST00000397998 M0R1W7 72 aa8.66□□□□□ -1.02
CSGALNACT1-202ENST00000397998 CTSGP08311 255 aa8.66□□□□□ -1.02
CSGALNACT1-202ENST00000397998 C8orf86Q6ZUL3 223 aa8.66□□□□□ -1.02
CSGALNACT1-202ENST00000397998 SMIM2Q9BVW6 85 aa8.66□□□□□ -1.02
CSGALNACT1-202ENST00000397998 IGLV11-55A0A075B6I3 123 aa8.66□□□□□ -1.02
CSGALNACT1-202ENST00000397998 MYMXA0A1B0GTQ4 84 aa8.66□□□□□ -1.02
CSGALNACT1-202ENST00000397998 A0A087WX48 190 aa8.66□□□□□ -1.02
CSGALNACT1-202ENST00000397998 WI2-2373I1.2A0A1W2PRP0 233 aa8.66□□□□□ -1.02
CSGALNACT1-202ENST00000397998 TRBV6-1A0A0K0K1D8 114 aa8.65□□□□□ -1.02
CSGALNACT1-202ENST00000397998 FANCD2OSQ96PS1 177 aa8.65□□□□□ -1.02
CSGALNACT1-202ENST00000397998 CSPG4Q6UVK1 2322 aa8.65□□□□□ -1.02
CSGALNACT1-202ENST00000397998 SPINK8P0C7L1 97 aa8.65□□□□□ -1.02
CSGALNACT1-202ENST00000397998 SYT8Q8NBV8 401 aa8.65□□□□□ -1.02
CSGALNACT1-202ENST00000397998 A0A087WWL8 130 aa8.65□□□□□ -1.03
CSGALNACT1-202ENST00000397998 GRNP28799 593 aaKnown RBP8.65□□□□□ -1.03
CSGALNACT1-202ENST00000397998 PAPPA-AS1Q5QFB9 102 aa8.65□□□□□ -1.03
CSGALNACT1-202ENST00000397998 MINOS1Q5TGZ0 78 aa8.65□□□□□ -1.03
CSGALNACT1-202ENST00000397998 MINOS1-NBL1R4GNA1 71 aa8.65□□□□□ -1.03
CSGALNACT1-202ENST00000397998 HLA-DRB4P13762 266 aa8.64□□□□□ -1.03
CSGALNACT1-202ENST00000397998 SAA4P35542 130 aa8.64□□□□□ -1.03
CSGALNACT1-202ENST00000397998 FOXI2Q6ZQN5 318 aa8.64□□□□□ -1.03
CSGALNACT1-202ENST00000397998 C9orf139Q6ZV77 190 aa8.64□□□□□ -1.03
CSGALNACT1-202ENST00000397998 RAX2Q96IS3 184 aa8.64□□□□□ -1.03
CSGALNACT1-202ENST00000397998 HLA-DRB4X5D2U9 266 aa8.64□□□□□ -1.03
CSGALNACT1-202ENST00000397998 TRAV41A0A0B4J266 112 aa8.64□□□□□ -1.03
CSGALNACT1-202ENST00000397998 FSTL3O95633 263 aa8.64□□□□□ -1.03
CSGALNACT1-202ENST00000397998 IGHV4-39P01824 125 aa8.64□□□□□ -1.03
CSGALNACT1-202ENST00000397998 TTC32Q5I0X7 151 aa8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms