RNA–Protein interactions for RNA: ENST00000397204.8

CAPN3-208, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 1,237 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-208ENST00000397204 C20orf85Q9H1P6 137 aa5.95□□□□□ -1.46
CAPN3-208ENST00000397204 FLVCR2Q9UPI3 526 aa5.95□□□□□ -1.46
CAPN3-208ENST00000397204 KLF12Q9Y4X4 402 aa5.95□□□□□ -1.46
CAPN3-208ENST00000397204 TRBV19A0A075B6N1 114 aa5.94□□□□□ -1.46
CAPN3-208ENST00000397204 L7N2F9 121 aa5.94□□□□□ -1.46
CAPN3-208ENST00000397204 M0R3E3 92 aa5.94□□□□□ -1.46
CAPN3-208ENST00000397204 PRAF2O60831 178 aa5.94□□□□□ -1.46
CAPN3-208ENST00000397204 MBPP02686 304 aaPredicted RBP5.94□□□□□ -1.46
CAPN3-208ENST00000397204 HIST1H1EP10412 219 aaKnown RBP5.94□□□□□ -1.46
CAPN3-208ENST00000397204 EVI2AP22794 236 aa5.94□□□□□ -1.46
CAPN3-208ENST00000397204 GCSHP23434 173 aa5.94□□□□□ -1.46
CAPN3-208ENST00000397204 FUSP35637 526 aaKnown RBP eCLIP5.94□□□□□ -1.46
CAPN3-208ENST00000397204 RPL29P47914 159 aaKnown RBP5.94□□□□□ -1.46
CAPN3-208ENST00000397204 INPP1P49441 399 aa5.94□□□□□ -1.46
CAPN3-208ENST00000397204 CRYBA4P53673 196 aa5.94□□□□□ -1.46
CAPN3-208ENST00000397204 VAMP2P63027 116 aa5.94□□□□□ -1.46
CAPN3-208ENST00000397204 CD300CQ08708 224 aa5.94□□□□□ -1.46
CAPN3-208ENST00000397204 ERCC8Q13216 396 aa5.94□□□□□ -1.46
CAPN3-208ENST00000397204 PDE6HQ13956 83 aa5.94□□□□□ -1.46
CAPN3-208ENST00000397204 FHL2Q14192 279 aa5.94□□□□□ -1.46
CAPN3-208ENST00000397204 C9orf47Q6ZRZ4 202 aa5.94□□□□□ -1.46
CAPN3-208ENST00000397204 MITD1Q8WV92 249 aa5.94□□□□□ -1.46
CAPN3-208ENST00000397204 MSRB1Q9NZV6 116 aa5.94□□□□□ -1.46
CAPN3-208ENST00000397204 TMEM14CQ9P0S9 112 aa5.94□□□□□ -1.46
CAPN3-208ENST00000397204 RCL1Q9Y2P8 373 aaKnown RBP5.94□□□□□ -1.46
CAPN3-208ENST00000397204 TIMM9Q9Y5J7 89 aa5.94□□□□□ -1.46
CAPN3-208ENST00000397204 LY96Q9Y6Y9 160 aa5.94□□□□□ -1.46
CAPN3-208ENST00000397204 TRAV6A0A075B6T7 132 aa5.93□□□□□ -1.46
CAPN3-208ENST00000397204 IGHV1OR15-1A0A075B7D0 117 aa5.93□□□□□ -1.46
CAPN3-208ENST00000397204 NDUFB4O95168 129 aa5.93□□□□□ -1.46
CAPN3-208ENST00000397204 IGHV3-53P01767 116 aa5.93□□□□□ -1.46
CAPN3-208ENST00000397204 S100A11P31949 105 aa5.93□□□□□ -1.46
CAPN3-208ENST00000397204 BTN1A1Q13410 526 aa5.93□□□□□ -1.46
CAPN3-208ENST00000397204 ZNF846Q147U1 533 aa5.93□□□□□ -1.46
CAPN3-208ENST00000397204 SPANXN2Q5MJ10 180 aa5.93□□□□□ -1.46
CAPN3-208ENST00000397204 TMEM78Q5T7P6 136 aa5.93□□□□□ -1.46
CAPN3-208ENST00000397204 MIC13Q5XKP0 118 aa5.93□□□□□ -1.46
CAPN3-208ENST00000397204 VGLL1Q99990 258 aa5.93□□□□□ -1.46
CAPN3-208ENST00000397204 UQCC1Q9NVA1 299 aa5.93□□□□□ -1.46
CAPN3-208ENST00000397204 WDR83OSQ9Y284 106 aa5.93□□□□□ -1.46
CAPN3-208ENST00000397204 CHTOPQ9Y3Y2 248 aaKnown RBP5.93□□□□□ -1.46
CAPN3-208ENST00000397204 TRBV7-9A0A0J9YWB2 115 aa5.92□□□□□ -1.46
CAPN3-208ENST00000397204 CENPXA8MT69 81 aa5.92□□□□□ -1.46
CAPN3-208ENST00000397204 CST7O76096 145 aa5.92□□□□□ -1.46
CAPN3-208ENST00000397204 SMR3BP02814 79 aaPredicted RBP5.92□□□□□ -1.46
CAPN3-208ENST00000397204 DNAH10OSP0CZ25 163 aa5.92□□□□□ -1.46
CAPN3-208ENST00000397204 BCAP31P51572 246 aa5.92□□□□□ -1.46
CAPN3-208ENST00000397204 VWC2Q2TAL6 325 aa5.92□□□□□ -1.46
CAPN3-208ENST00000397204 WDR73Q6P4I2 378 aa5.92□□□□□ -1.46
CAPN3-208ENST00000397204 SRRQ9GZT4 340 aa5.92□□□□□ -1.46
CAPN3-208ENST00000397204 AAMDCQ9H7C9 122 aa5.92□□□□□ -1.46
CAPN3-208ENST00000397204 SLC39A9Q9NUM3 307 aa5.92□□□□□ -1.46
CAPN3-208ENST00000397204 DNAH8Q96JB1 4490 aa5.91□□□□□ -1.46
CAPN3-208ENST00000397204 TRGV4A0A0C4DH28 118 aa5.91□□□□□ -1.46
CAPN3-208ENST00000397204 E5RGE8 158 aa5.91□□□□□ -1.46
CAPN3-208ENST00000397204 K7EQD1 137 aa5.91□□□□□ -1.46
CAPN3-208ENST00000397204 ORM1P02763 201 aa5.91□□□□□ -1.46
CAPN3-208ENST00000397204 PVALBP20472 110 aaPredicted RBP5.91□□□□□ -1.46
CAPN3-208ENST00000397204 SRIP30626 198 aa5.91□□□□□ -1.46
CAPN3-208ENST00000397204 CAV2P51636 162 aa5.91□□□□□ -1.46
CAPN3-208ENST00000397204 BAK1Q16611 211 aa5.91□□□□□ -1.46
CAPN3-208ENST00000397204 ATP6V1FQ16864 119 aa5.91□□□□□ -1.46
CAPN3-208ENST00000397204 TRIQKQ629K1 86 aa5.91□□□□□ -1.46
CAPN3-208ENST00000397204 C10orf126Q8N4M7 172 aa5.91□□□□□ -1.46
CAPN3-208ENST00000397204 ZFAND2AQ8N6M9 145 aa5.91□□□□□ -1.46
CAPN3-208ENST00000397204 SPXQ9BT56 116 aa5.91□□□□□ -1.46
CAPN3-208ENST00000397204 TMEM70Q9BUB7 260 aa5.91□□□□□ -1.46
CAPN3-208ENST00000397204 MRPL16Q9NX20 251 aaKnown RBP5.91□□□□□ -1.46
CAPN3-208ENST00000397204 MDFICQ9P1T7 246 aa5.91□□□□□ -1.46
CAPN3-208ENST00000397204 ZNF492Q9P255 531 aa5.91□□□□□ -1.46
CAPN3-208ENST00000397204 TP53TG3Q9ULZ0 132 aa5.91□□□□□ -1.46
CAPN3-208ENST00000397204 FAM24AA6NFZ4 105 aa5.9□□□□□ -1.46
CAPN3-208ENST00000397204 NBEAP1P0C6P0 100 aa5.9□□□□□ -1.46
CAPN3-208ENST00000397204 SULT1A1P50225 295 aa5.9□□□□□ -1.46
CAPN3-208ENST00000397204 ZNF138P52744 262 aa5.9□□□□□ -1.46
CAPN3-208ENST00000397204 HBG1P69891 147 aa5.9□□□□□ -1.46
CAPN3-208ENST00000397204 HBG2P69892 147 aa5.9□□□□□ -1.46
CAPN3-208ENST00000397204 BAXQ07812 192 aa5.9□□□□□ -1.46
CAPN3-208ENST00000397204 ZNF415Q09FC8 603 aa5.9□□□□□ -1.46
CAPN3-208ENST00000397204 SH2D6Q7Z4S9 175 aa5.9□□□□□ -1.46
CAPN3-208ENST00000397204 EXOC3-AS1Q8N2X6 119 aa5.9□□□□□ -1.46
CAPN3-208ENST00000397204 OR10G4Q8NGN3 311 aa5.9□□□□□ -1.46
CAPN3-208ENST00000397204 NTN5Q8WTR8 489 aaPredicted RBP5.9□□□□□ -1.46
CAPN3-208ENST00000397204 BLNKQ8WV28 456 aa5.9□□□□□ -1.46
CAPN3-208ENST00000397204 PCNPQ8WW12 178 aaKnown RBP5.9□□□□□ -1.46
CAPN3-208ENST00000397204 RASL10AQ92737 203 aa5.9□□□□□ -1.46
CAPN3-208ENST00000397204 TXNDC17Q9BRA2 123 aa5.9□□□□□ -1.46
CAPN3-208ENST00000397204 C11orf1Q9H5F2 150 aa5.9□□□□□ -1.46
CAPN3-208ENST00000397204 GPN1Q9HCN4 374 aaPredicted RBP5.9□□□□□ -1.46
CAPN3-208ENST00000397204 LSM5Q9Y4Y9 91 aaKnown RBP5.9□□□□□ -1.46
CAPN3-208ENST00000397204 CRYGDP07320 174 aa5.89□□□□□ -1.47
CAPN3-208ENST00000397204 PYYP10082 97 aa5.89□□□□□ -1.47
CAPN3-208ENST00000397204 GYPEP15421 78 aa5.89□□□□□ -1.47
CAPN3-208ENST00000397204 BTCP35070 178 aa5.89□□□□□ -1.47
CAPN3-208ENST00000397204 TIRAPP58753 221 aa5.89□□□□□ -1.47
CAPN3-208ENST00000397204 ZNF266Q14584 549 aa5.89□□□□□ -1.47
CAPN3-208ENST00000397204 Q6ZQT7 251 aa5.89□□□□□ -1.47
CAPN3-208ENST00000397204 Q6ZSN1 163 aa5.89□□□□□ -1.47
CAPN3-208ENST00000397204 WFDC10BQ8IUB3 73 aa5.89□□□□□ -1.47
CAPN3-208ENST00000397204 TMEM252Q8N6L7 170 aa5.89□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms