RNA–Protein interactions for RNA: ENST00000396914.3

CHCHD4-202, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHCHD4, Length 1,405 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD4-202ENST00000396914 CASC10Q5T4H9 136 aa21.1■□□□□ 0.97
CHCHD4-202ENST00000396914 HIST1H2BAQ96A08 127 aa21.1■□□□□ 0.97
CHCHD4-202ENST00000396914 PYGO2Q9BRQ0 406 aa21.1■□□□□ 0.97
CHCHD4-202ENST00000396914 TRAV34A0A0B4J273 112 aa21.09■□□□□ 0.97
CHCHD4-202ENST00000396914 SPART-AS1P0CW21 52 aa21.09■□□□□ 0.97
CHCHD4-202ENST00000396914 FLI1Q01543 452 aaPredicted RBP21.09■□□□□ 0.97
CHCHD4-202ENST00000396914 C16orf74Q96GX8 76 aa21.09■□□□□ 0.97
CHCHD4-202ENST00000396914 TRAV1-1A0A0B4J248 108 aa21.08■□□□□ 0.97
CHCHD4-202ENST00000396914 RGS13O14921 159 aa21.08■□□□□ 0.97
CHCHD4-202ENST00000396914 ZNF324O75467 553 aaPredicted RBP21.08■□□□□ 0.97
CHCHD4-202ENST00000396914 ZNF767PQ75MW2 155 aa21.08■□□□□ 0.97
CHCHD4-202ENST00000396914 TMEM75Q8N9X5 138 aa21.08■□□□□ 0.97
CHCHD4-202ENST00000396914 LINC00479Q96M42 142 aa21.08■□□□□ 0.97
CHCHD4-202ENST00000396914 FAM222AQ5U5X8 452 aa21.07■□□□□ 0.96
CHCHD4-202ENST00000396914 MANBALQ9NQG1 85 aa21.07■□□□□ 0.96
CHCHD4-202ENST00000396914 FBLL1A6NHQ2 334 aaKnown RBP21.06■□□□□ 0.96
CHCHD4-202ENST00000396914 Q6ZQT7 251 aa21.06■□□□□ 0.96
CHCHD4-202ENST00000396914 TVP23CQ96ET8 276 aa21.06■□□□□ 0.96
CHCHD4-202ENST00000396914 CBY3A6NI87 242 aa21.05■□□□□ 0.96
CHCHD4-202ENST00000396914 ZNF493Q6ZR52 646 aa21.05■□□□□ 0.96
CHCHD4-202ENST00000396914 TMEM263Q8WUH6 116 aaKnown RBP21.05■□□□□ 0.96
CHCHD4-202ENST00000396914 TCEAL7Q9BRU2 100 aa21.05■□□□□ 0.96
CHCHD4-202ENST00000396914 C11orf94C9JXX5 98 aa21.04■□□□□ 0.96
CHCHD4-202ENST00000396914 IGLV2-11P01706 119 aa21.04■□□□□ 0.96
CHCHD4-202ENST00000396914 UBE2G1P62253 170 aa21.04■□□□□ 0.96
CHCHD4-202ENST00000396914 DKK2Q9UBU2 259 aa21.04■□□□□ 0.96
CHCHD4-202ENST00000396914 TEX48A0A1B0GUV7 120 aa21.04■□□□□ 0.96
CHCHD4-202ENST00000396914 MUC21Q5SSG8 566 aa21.04■□□□□ 0.96
CHCHD4-202ENST00000396914 EIF4E3Q8N5X7 224 aaKnown RBP21.04■□□□□ 0.96
CHCHD4-202ENST00000396914 PHLDA1Q8WV24 401 aaPredicted RBP21.04■□□□□ 0.96
CHCHD4-202ENST00000396914 C8orf49Q96NF6 230 aa21.04■□□□□ 0.96
CHCHD4-202ENST00000396914 DNAH7Q8WXX0 4024 aa21.03■□□□□ 0.96
CHCHD4-202ENST00000396914 IFNA1P01562 189 aa21.03■□□□□ 0.96
CHCHD4-202ENST00000396914 AKR1C3P42330 323 aa21.03■□□□□ 0.96
CHCHD4-202ENST00000396914 BLOC1S1P78537 153 aa21.03■□□□□ 0.96
CHCHD4-202ENST00000396914 SAPCD1Q5SSQ6 148 aa21.03■□□□□ 0.96
CHCHD4-202ENST00000396914 NAGKQ9UJ70 344 aa21.03■□□□□ 0.96
CHCHD4-202ENST00000396914 IGHV1OR15-1A0A075B7D0 117 aa21.02■□□□□ 0.96
CHCHD4-202ENST00000396914 NUPR2A6NF83 97 aa21.02■□□□□ 0.96
CHCHD4-202ENST00000396914 C12orf74Q32Q52 190 aa21.02■□□□□ 0.96
CHCHD4-202ENST00000396914 Q6AWC8 147 aa21.02■□□□□ 0.96
CHCHD4-202ENST00000396914 Q6ZTC4 211 aa21.02■□□□□ 0.96
CHCHD4-202ENST00000396914 RNASE8Q8TDE3 154 aaKnown RBP21.02■□□□□ 0.96
CHCHD4-202ENST00000396914 SNURFLB1AK76 121 aa21.01■□□□□ 0.95
CHCHD4-202ENST00000396914 TIMM8BQ9Y5J9 83 aaPredicted RBP21.01■□□□□ 0.95
CHCHD4-202ENST00000396914 TRAV21A0A0B4J279 112 aa21■□□□□ 0.95
CHCHD4-202ENST00000396914 SCO2A0A1W2PP80 73 aa21■□□□□ 0.95
CHCHD4-202ENST00000396914 SMUG1Q53HV7 270 aa21■□□□□ 0.95
CHCHD4-202ENST00000396914 FAM159AQ6UWV7 190 aa21■□□□□ 0.95
CHCHD4-202ENST00000396914 Q86TA4 180 aa21■□□□□ 0.95
CHCHD4-202ENST00000396914 FMC1Q96HJ9 113 aa21■□□□□ 0.95
CHCHD4-202ENST00000396914 NOP10Q9NPE3 64 aaKnown RBP21■□□□□ 0.95
CHCHD4-202ENST00000396914 DAD1P61803 113 aa20.99■□□□□ 0.95
CHCHD4-202ENST00000396914 CEMP1Q6PRD7 247 aaPredicted RBP20.99■□□□□ 0.95
CHCHD4-202ENST00000396914 ZNF680Q8NEM1 530 aa20.99■□□□□ 0.95
CHCHD4-202ENST00000396914 LINC00467Q9BRT7 94 aa20.99■□□□□ 0.95
CHCHD4-202ENST00000396914 PLAC8L1A1L4L8 177 aa20.98■□□□□ 0.95
CHCHD4-202ENST00000396914 LYRM9A8MSI8 78 aa20.98■□□□□ 0.95
CHCHD4-202ENST00000396914 GCGP01275 180 aa20.98■□□□□ 0.95
CHCHD4-202ENST00000396914 DEFB130BP0DP73 79 aa20.98■□□□□ 0.95
CHCHD4-202ENST00000396914 DEFB130AP0DP74 79 aa20.98■□□□□ 0.95
CHCHD4-202ENST00000396914 TP53TG3Q9ULZ0 132 aa20.98■□□□□ 0.95
CHCHD4-202ENST00000396914 KLK5Q9Y337 293 aaPredicted RBP20.97■□□□□ 0.95
CHCHD4-202ENST00000396914 ANXA2RQ3ZCQ2 193 aa20.96■□□□□ 0.95
CHCHD4-202ENST00000396914 GSN-AS1Q9NRJ2 163 aa20.96■□□□□ 0.95
CHCHD4-202ENST00000396914 TRAV10A0A0B4J240 114 aa20.95■□□□□ 0.95
CHCHD4-202ENST00000396914 HTN3P15516 51 aa20.95■□□□□ 0.94
CHCHD4-202ENST00000396914 ZNF80P51504 273 aaPredicted RBP20.95■□□□□ 0.94
CHCHD4-202ENST00000396914 TMEM183BQ1AE95 376 aa20.95■□□□□ 0.94
CHCHD4-202ENST00000396914 ZFP30Q9Y2G7 519 aa20.95■□□□□ 0.94
CHCHD4-202ENST00000396914 KLF12Q9Y4X4 402 aa20.95■□□□□ 0.94
CHCHD4-202ENST00000396914 BCL2P10415 239 aa20.94■□□□□ 0.94
CHCHD4-202ENST00000396914 TMEM183AQ8IXX5 376 aa20.94■□□□□ 0.94
CHCHD4-202ENST00000396914 TXNDC17Q9BRA2 123 aa20.94■□□□□ 0.94
CHCHD4-202ENST00000396914 DEFB131BA0A096LNP1 70 aa20.93■□□□□ 0.94
CHCHD4-202ENST00000396914 S100A9P06702 114 aaKnown RBP20.93■□□□□ 0.94
CHCHD4-202ENST00000396914 MEF2BQ02080 365 aaPredicted RBP20.93■□□□□ 0.94
CHCHD4-202ENST00000396914 PFN1P07737 140 aaKnown RBP20.92■□□□□ 0.94
CHCHD4-202ENST00000396914 C2CD4CQ8TF44 421 aa20.92■□□□□ 0.94
CHCHD4-202ENST00000396914 VAX2Q9UIW0 290 aa20.92■□□□□ 0.94
CHCHD4-202ENST00000396914 TRGV11A0A075B6L2 103 aa20.91■□□□□ 0.94
CHCHD4-202ENST00000396914 ZNF415Q09FC8 603 aa20.91■□□□□ 0.94
CHCHD4-202ENST00000396914 C11orf72Q8NBR9 251 aa20.91■□□□□ 0.94
CHCHD4-202ENST00000396914 TRBV6-1A0A0K0K1D8 114 aa20.9■□□□□ 0.94
CHCHD4-202ENST00000396914 TAGLN2P37802 199 aaKnown RBP20.9■□□□□ 0.94
CHCHD4-202ENST00000396914 TEX261Q6UWH6 196 aa20.9■□□□□ 0.94
CHCHD4-202ENST00000396914 SDF2L1Q9HCN8 221 aa20.9■□□□□ 0.94
CHCHD4-202ENST00000396914 GAGE12BA1L429 117 aa20.89■□□□□ 0.94
CHCHD4-202ENST00000396914 PDE6DO43924 150 aa20.89■□□□□ 0.94
CHCHD4-202ENST00000396914 GAGE7O76087 117 aa20.89■□□□□ 0.94
CHCHD4-202ENST00000396914 LTAP01374 205 aa20.89■□□□□ 0.94
CHCHD4-202ENST00000396914 GAGE12FP0CL80 117 aa20.89■□□□□ 0.94
CHCHD4-202ENST00000396914 GAGE12GP0CL81 117 aa20.89■□□□□ 0.94
CHCHD4-202ENST00000396914 GAGE12IP0CL82 117 aa20.89■□□□□ 0.94
CHCHD4-202ENST00000396914 IBA57Q5T440 356 aaKnown RBP20.89■□□□□ 0.94
CHCHD4-202ENST00000396914 NHLRC2Q8NBF2 726 aa20.89■□□□□ 0.94
CHCHD4-202ENST00000396914 KCNS1Q96KK3 526 aa20.89■□□□□ 0.94
CHCHD4-202ENST00000396914 IGLL5B9A064 214 aa20.88■□□□□ 0.93
CHCHD4-202ENST00000396914 TCL1AP56279 114 aa20.88■□□□□ 0.93
CHCHD4-202ENST00000396914 DAZ2Q13117 558 aaKnown RBP20.88■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms