RNA–Protein interactions for RNA: ENST00000396526.7

SNX6-202, Transcript of sorting nexin 6, humanhuman

TSL 1 (best) BASIC

Gene SNX6, Length 3,398 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-202ENST00000396526 REC114Q7Z4M0 266 aa12.28□□□□□ -0.44
SNX6-202ENST00000396526 PSMG3-AS1Q96PY0 264 aa12.28□□□□□ -0.44
SNX6-202ENST00000396526 HSPB8Q9UJY1 196 aa12.28□□□□□ -0.44
SNX6-202ENST00000396526 ABCA12Q86UK0 2595 aa12.27□□□□□ -0.44
SNX6-202ENST00000396526 MUC21A0A0G2JKD1 596 aa12.27□□□□□ -0.44
SNX6-202ENST00000396526 MUC21A0A140T8X8 626 aa12.27□□□□□ -0.44
SNX6-202ENST00000396526 MUC21Q5SSG8 566 aa12.27□□□□□ -0.44
SNX6-202ENST00000396526 OR8A1Q8NGG7 326 aa12.27□□□□□ -0.44
SNX6-202ENST00000396526 UBR5O95071 2799 aaPredicted RBP12.27□□□□□ -0.44
SNX6-202ENST00000396526 TRBV7-9A0A0J9YWB2 115 aa12.27□□□□□ -0.45
SNX6-202ENST00000396526 AMN1Q8IY45 258 aa12.27□□□□□ -0.45
SNX6-202ENST00000396526 PRRC2AP48634 2157 aaKnown RBP12.27□□□□□ -0.45
SNX6-202ENST00000396526 TMEM70Q9BUB7 260 aa12.27□□□□□ -0.45
SNX6-202ENST00000396526 ZNF702PQ9H963 129 aa12.27□□□□□ -0.45
SNX6-202ENST00000396526 D6R8Y8 96 aa12.26□□□□□ -0.45
SNX6-202ENST00000396526 C20orf173Q96LM9 149 aa12.26□□□□□ -0.45
SNX6-202ENST00000396526 NDUFAF3Q9BU61 184 aa12.26□□□□□ -0.45
SNX6-202ENST00000396526 CNFNQ9BYD5 112 aa12.26□□□□□ -0.45
SNX6-202ENST00000396526 PAM16Q9Y3D7 125 aa12.26□□□□□ -0.45
SNX6-202ENST00000396526 SOCS3O14543 225 aa12.26□□□□□ -0.45
SNX6-202ENST00000396526 S100A4P26447 101 aaKnown RBP12.26□□□□□ -0.45
SNX6-202ENST00000396526 CACNG7P62955 275 aa12.26□□□□□ -0.45
SNX6-202ENST00000396526 TMEM86BQ8N661 226 aa12.26□□□□□ -0.45
SNX6-202ENST00000396526 KLHDC1Q8N7A1 406 aa12.26□□□□□ -0.45
SNX6-202ENST00000396526 MAP1AP78559 2803 aaPredicted RBP12.26□□□□□ -0.45
SNX6-202ENST00000396526 SNRPD3P62318 126 aaKnown RBP12.26□□□□□ -0.45
SNX6-202ENST00000396526 WFDC3Q8IUB2 231 aa12.26□□□□□ -0.45
SNX6-202ENST00000396526 DOPEY2Q9Y3R5 2298 aa12.25□□□□□ -0.45
SNX6-202ENST00000396526 SPANXN1Q5VSR9 72 aa12.25□□□□□ -0.45
SNX6-202ENST00000396526 MAP1LC3CQ9BXW4 147 aa12.25□□□□□ -0.45
SNX6-202ENST00000396526 OR10AG1Q8NH19 301 aa12.25□□□□□ -0.45
SNX6-202ENST00000396526 C20orf144Q9BQM9 153 aa12.25□□□□□ -0.45
SNX6-202ENST00000396526 CENPEQ02224 2701 aa12.25□□□□□ -0.45
SNX6-202ENST00000396526 IGKV3D-20A0A0C4DH25 116 aa12.24□□□□□ -0.45
SNX6-202ENST00000396526 MRPL51Q4U2R6 128 aaKnown RBP12.24□□□□□ -0.45
SNX6-202ENST00000396526 DPF1Q92782 380 aa12.24□□□□□ -0.45
SNX6-202ENST00000396526 KIR2DL5BA0A0G2JN68 375 aa12.24□□□□□ -0.45
SNX6-202ENST00000396526 KIR2DL5BA0A0G2JPC4 375 aa12.24□□□□□ -0.45
SNX6-202ENST00000396526 C10orf99Q6UWK7 81 aa12.24□□□□□ -0.45
SNX6-202ENST00000396526 KIR2DL5AQ8N109 375 aa12.24□□□□□ -0.45
SNX6-202ENST00000396526 LAMTOR2Q9Y2Q5 125 aa12.24□□□□□ -0.45
SNX6-202ENST00000396526 IGHV1-24A0A0C4DH33 117 aa12.24□□□□□ -0.45
SNX6-202ENST00000396526 J3KRW8 73 aa12.24□□□□□ -0.45
SNX6-202ENST00000396526 LGALS9O00182 355 aa12.24□□□□□ -0.45
SNX6-202ENST00000396526 SRD5A1P18405 259 aa12.23□□□□□ -0.45
SNX6-202ENST00000396526 SYNJ2BPP57105 145 aa12.23□□□□□ -0.45
SNX6-202ENST00000396526 CTAG1AP78358 180 aa12.23□□□□□ -0.45
SNX6-202ENST00000396526 ZNF705AQ6ZN79 300 aaPredicted RBP12.23□□□□□ -0.45
SNX6-202ENST00000396526 TIMM8BQ9Y5J9 83 aaPredicted RBP12.23□□□□□ -0.45
SNX6-202ENST00000396526 PLA2G2AP14555 144 aa12.23□□□□□ -0.45
SNX6-202ENST00000396526 U3KQK5 164 aa12.23□□□□□ -0.45
SNX6-202ENST00000396526 URB1-AS1Q96HZ7 61 aa12.22□□□□□ -0.45
SNX6-202ENST00000396526 MAP1LC3AQ9H492 121 aa12.22□□□□□ -0.45
SNX6-202ENST00000396526 LOC389332A0A1B0GUA5 103 aa12.22□□□□□ -0.45
SNX6-202ENST00000396526 RNF152Q8N8N0 203 aa12.22□□□□□ -0.45
SNX6-202ENST00000396526 WFDC11Q8NEX6 87 aa12.22□□□□□ -0.45
SNX6-202ENST00000396526 C14orf144Q96I85 54 aa12.22□□□□□ -0.45
SNX6-202ENST00000396526 DUX5Q96PT3 197 aa12.22□□□□□ -0.45
SNX6-202ENST00000396526 CRYBG3Q68DQ2 2970 aa12.22□□□□□ -0.45
SNX6-202ENST00000396526 ASIPP42127 132 aa12.21□□□□□ -0.45
SNX6-202ENST00000396526 SCGB2A2Q13296 93 aa12.21□□□□□ -0.45
SNX6-202ENST00000396526 LBHQ53QV2 105 aaPredicted RBP12.21□□□□□ -0.45
SNX6-202ENST00000396526 EBLN2Q6P2I7 272 aa12.21□□□□□ -0.45
SNX6-202ENST00000396526 MYOZ3Q8TDC0 251 aa12.21□□□□□ -0.45
SNX6-202ENST00000396526 TCF21O43680 179 aa12.21□□□□□ -0.45
SNX6-202ENST00000396526 RNASE4P34096 147 aaKnown RBP12.21□□□□□ -0.45
SNX6-202ENST00000396526 TFPI2P48307 235 aa12.21□□□□□ -0.45
SNX6-202ENST00000396526 KHDC1LQ5JSQ8 128 aa12.21□□□□□ -0.45
SNX6-202ENST00000396526 ZFAND2AQ8N6M9 145 aa12.21□□□□□ -0.45
SNX6-202ENST00000396526 CR1P17927 2039 aa12.21□□□□□ -0.46
SNX6-202ENST00000396526 HOXD3P31249 432 aaPredicted RBP12.21□□□□□ -0.46
SNX6-202ENST00000396526 SPATA45Q537H7 98 aa12.21□□□□□ -0.46
SNX6-202ENST00000396526 KRTAP1-3Q8IUG1 177 aa12.21□□□□□ -0.46
SNX6-202ENST00000396526 Q8N2B8 174 aa12.21□□□□□ -0.46
SNX6-202ENST00000396526 MIEN1Q9BRT3 115 aa12.21□□□□□ -0.46
SNX6-202ENST00000396526 RNF114Q9Y508 228 aa12.21□□□□□ -0.46
SNX6-202ENST00000396526 C2orf70A6NJV1 201 aa12.2□□□□□ -0.46
SNX6-202ENST00000396526 MS4A6AQ9H2W1 248 aa12.2□□□□□ -0.46
SNX6-202ENST00000396526 C11orf21Q9P2W6 132 aa12.2□□□□□ -0.46
SNX6-202ENST00000396526 IGHV4OR15-8A0A075B7B6 117 aa12.2□□□□□ -0.46
SNX6-202ENST00000396526 A0A087WW49 117 aa12.2□□□□□ -0.46
SNX6-202ENST00000396526 HSBP1L1C9JCN9 74 aa12.2□□□□□ -0.46
SNX6-202ENST00000396526 PET117Q6UWS5 81 aa12.2□□□□□ -0.46
SNX6-202ENST00000396526 MSRB1Q9NZV6 116 aa12.2□□□□□ -0.46
SNX6-202ENST00000396526 IFI27P40305 119 aaPredicted RBP12.19□□□□□ -0.46
SNX6-202ENST00000396526 F6UB75 175 aa12.19□□□□□ -0.46
SNX6-202ENST00000396526 SYS1-DBNDD2H3BUS1 97 aa12.19□□□□□ -0.46
SNX6-202ENST00000396526 DCANP1Q8TF63 244 aa12.19□□□□□ -0.46
SNX6-202ENST00000396526 SIGLEC8Q9NYZ4 499 aa12.19□□□□□ -0.46
SNX6-202ENST00000396526 PEMTQ9UBM1 199 aa12.19□□□□□ -0.46
SNX6-202ENST00000396526 PHLDA3Q9Y5J5 127 aa12.19□□□□□ -0.46
SNX6-202ENST00000396526 UTP20O75691 2785 aaKnown RBP12.19□□□□□ -0.46
SNX6-202ENST00000396526 H3BVH4 76 aa12.19□□□□□ -0.46
SNX6-202ENST00000396526 SNAI2O43623 268 aa12.18□□□□□ -0.46
SNX6-202ENST00000396526 TSPOP30536 169 aa12.18□□□□□ -0.46
SNX6-202ENST00000396526 LEPP41159 167 aa12.18□□□□□ -0.46
SNX6-202ENST00000396526 PSMG4Q5JS54 123 aa12.18□□□□□ -0.46
SNX6-202ENST00000396526 Q8N976 141 aa12.18□□□□□ -0.46
SNX6-202ENST00000396526 NXT2Q9NPJ8 142 aaKnown RBP12.18□□□□□ -0.46
SNX6-202ENST00000396526 DUSP14O95147 198 aaKnown RBP12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms