RNA–Protein interactions for RNA: ENST00000394986.5

SNCA-203, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNCA, Length 1,420 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-203ENST00000394986 SPART-AS1P0CW21 52 aa14.23□□□□□ -0.13
SNCA-203ENST00000394986 CCL20P78556 96 aa14.23□□□□□ -0.13
SNCA-203ENST00000394986 CST9LP1Q5W188 147 aa14.23□□□□□ -0.13
SNCA-203ENST00000394986 RNASE8Q8TDE3 154 aaKnown RBP14.23□□□□□ -0.13
SNCA-203ENST00000394986 LENEPQ9Y5L5 61 aa14.23□□□□□ -0.13
SNCA-203ENST00000394986 SERTM2A0A1B0GWG4 89 aa14.22□□□□□ -0.13
SNCA-203ENST00000394986 PEX7O00628 323 aa14.22□□□□□ -0.13
SNCA-203ENST00000394986 ALKAL2Q6UX46 152 aa14.22□□□□□ -0.13
SNCA-203ENST00000394986 C16orf74Q96GX8 76 aa14.22□□□□□ -0.13
SNCA-203ENST00000394986 PSG8Q9UQ74 426 aa14.22□□□□□ -0.13
SNCA-203ENST00000394986 K7EQM0 130 aa14.21□□□□□ -0.13
SNCA-203ENST00000394986 CEMP1Q6PRD7 247 aaPredicted RBP14.21□□□□□ -0.13
SNCA-203ENST00000394986 PRNTQ86SH4 94 aa14.21□□□□□ -0.13
SNCA-203ENST00000394986 CCDC28AQ8IWP9 274 aa14.21□□□□□ -0.13
SNCA-203ENST00000394986 TMEM263Q8WUH6 116 aaKnown RBP14.21□□□□□ -0.13
SNCA-203ENST00000394986 PYGO2Q9BRQ0 406 aa14.21□□□□□ -0.13
SNCA-203ENST00000394986 TREM1Q9NP99 234 aa14.21□□□□□ -0.13
SNCA-203ENST00000394986 NUPR2A6NF83 97 aa14.2□□□□□ -0.14
SNCA-203ENST00000394986 FLI1Q01543 452 aaPredicted RBP14.2□□□□□ -0.14
SNCA-203ENST00000394986 TMEM75Q8N9X5 138 aa14.2□□□□□ -0.14
SNCA-203ENST00000394986 C8orf49Q96NF6 230 aa14.2□□□□□ -0.14
SNCA-203ENST00000394986 NKX6-2Q9C056 277 aaPredicted RBP14.2□□□□□ -0.14
SNCA-203ENST00000394986 DYNC2H1Q8NCM8 4307 aaKnown RBP14.2□□□□□ -0.14
SNCA-203ENST00000394986 TENM2Q9NT68 2774 aa14.2□□□□□ -0.14
SNCA-203ENST00000394986 MUC21Q5SSG8 566 aa14.19□□□□□ -0.14
SNCA-203ENST00000394986 TP53TG3Q9ULZ0 132 aa14.19□□□□□ -0.14
SNCA-203ENST00000394986 ARL2-SNX15V9GYD0 113 aa14.19□□□□□ -0.14
SNCA-203ENST00000394986 CBY3A6NI87 242 aa14.18□□□□□ -0.14
SNCA-203ENST00000394986 RGS13O14921 159 aa14.18□□□□□ -0.14
SNCA-203ENST00000394986 Q6AWC8 147 aa14.18□□□□□ -0.14
SNCA-203ENST00000394986 ZNF493Q6ZR52 646 aa14.18□□□□□ -0.14
SNCA-203ENST00000394986 HIST1H2BAQ96A08 127 aa14.18□□□□□ -0.14
SNCA-203ENST00000394986 NDFIP1Q9BT67 221 aa14.18□□□□□ -0.14
SNCA-203ENST00000394986 GNG13Q9P2W3 67 aa14.18□□□□□ -0.14
SNCA-203ENST00000394986 IGHV1OR15-1A0A075B7D0 117 aa14.17□□□□□ -0.14
SNCA-203ENST00000394986 TRAV1-1A0A0B4J248 108 aa14.17□□□□□ -0.14
SNCA-203ENST00000394986 EIF4E3Q8N5X7 224 aaKnown RBP14.17□□□□□ -0.14
SNCA-203ENST00000394986 LINC00467Q9BRT7 94 aa14.17□□□□□ -0.14
SNCA-203ENST00000394986 NOP10Q9NPE3 64 aaKnown RBP14.17□□□□□ -0.14
SNCA-203ENST00000394986 TEX48A0A1B0GUV7 120 aa14.16□□□□□ -0.14
SNCA-203ENST00000394986 LYRM9A8MSI8 78 aa14.16□□□□□ -0.14
SNCA-203ENST00000394986 DEFB130BP0DP73 79 aa14.16□□□□□ -0.14
SNCA-203ENST00000394986 DEFB130AP0DP74 79 aa14.16□□□□□ -0.14
SNCA-203ENST00000394986 ZNF80P51504 273 aaPredicted RBP14.16□□□□□ -0.14
SNCA-203ENST00000394986 DAD1P61803 113 aa14.16□□□□□ -0.14
SNCA-203ENST00000394986 Q86TA4 180 aa14.16□□□□□ -0.14
SNCA-203ENST00000394986 GSN-AS1Q9NRJ2 163 aa14.16□□□□□ -0.14
SNCA-203ENST00000394986 NAGKQ9UJ70 344 aa14.16□□□□□ -0.14
SNCA-203ENST00000394986 TIMM8BQ9Y5J9 83 aaPredicted RBP14.16□□□□□ -0.14
SNCA-203ENST00000394986 KMT2CQ8NEZ4 4911 aaKnown RBP14.16□□□□□ -0.14
SNCA-203ENST00000394986 TRAV10A0A0B4J240 114 aa14.15□□□□□ -0.14
SNCA-203ENST00000394986 SCO2A0A1W2PP80 73 aa14.15□□□□□ -0.14
SNCA-203ENST00000394986 PPT1P50897 306 aa14.15□□□□□ -0.14
SNCA-203ENST00000394986 C11orf72Q8NBR9 251 aa14.15□□□□□ -0.14
SNCA-203ENST00000394986 C11orf94C9JXX5 98 aa14.15□□□□□ -0.14
SNCA-203ENST00000394986 PLECQ15149 4684 aaKnown RBP14.15□□□□□ -0.14
SNCA-203ENST00000394986 ANXA2RQ3ZCQ2 193 aa14.15□□□□□ -0.14
SNCA-203ENST00000394986 TCEAL7Q9BRU2 100 aa14.15□□□□□ -0.14
SNCA-203ENST00000394986 KLK5Q9Y337 293 aaPredicted RBP14.15□□□□□ -0.14
SNCA-203ENST00000394986 DEFB131BA0A096LNP1 70 aa14.14□□□□□ -0.15
SNCA-203ENST00000394986 TRAV21A0A0B4J279 112 aa14.14□□□□□ -0.15
SNCA-203ENST00000394986 FBLL1A6NHQ2 334 aaKnown RBP14.14□□□□□ -0.15
SNCA-203ENST00000394986 SNURFLB1AK76 121 aa14.14□□□□□ -0.15
SNCA-203ENST00000394986 TEX46H3BTG2 121 aa14.14□□□□□ -0.15
SNCA-203ENST00000394986 GCGP01275 180 aa14.14□□□□□ -0.15
SNCA-203ENST00000394986 HTN3P15516 51 aa14.14□□□□□ -0.15
SNCA-203ENST00000394986 ZNF680Q8NEM1 530 aa14.14□□□□□ -0.15
SNCA-203ENST00000394986 MANBALQ9NQG1 85 aa14.14□□□□□ -0.15
SNCA-203ENST00000394986 AKR1C3P42330 323 aa14.13□□□□□ -0.15
SNCA-203ENST00000394986 C2CD4CQ8TF44 421 aa14.13□□□□□ -0.15
SNCA-203ENST00000394986 KLF12Q9Y4X4 402 aa14.13□□□□□ -0.15
SNCA-203ENST00000394986 IGLL5B9A064 214 aa14.12□□□□□ -0.15
SNCA-203ENST00000394986 UBE2G1P62253 170 aa14.12□□□□□ -0.15
SNCA-203ENST00000394986 TMEM183BQ1AE95 376 aa14.12□□□□□ -0.15
SNCA-203ENST00000394986 SMUG1Q53HV7 270 aa14.12□□□□□ -0.15
SNCA-203ENST00000394986 SAPCD1Q5SSQ6 148 aa14.12□□□□□ -0.15
SNCA-203ENST00000394986 FAM159AQ6UWV7 190 aa14.12□□□□□ -0.15
SNCA-203ENST00000394986 TMEM183AQ8IXX5 376 aa14.12□□□□□ -0.15
SNCA-203ENST00000394986 FMC1Q96HJ9 113 aa14.12□□□□□ -0.15
SNCA-203ENST00000394986 C11orf21Q9P2W6 132 aa14.12□□□□□ -0.15
SNCA-203ENST00000394986 MDFICQ9P1T7 246 aa14.11□□□□□ -0.15
SNCA-203ENST00000394986 GAGE12BA1L429 117 aa14.1□□□□□ -0.15
SNCA-203ENST00000394986 GAGE7O76087 117 aa14.1□□□□□ -0.15
SNCA-203ENST00000394986 GAGE12FP0CL80 117 aa14.1□□□□□ -0.15
SNCA-203ENST00000394986 GAGE12GP0CL81 117 aa14.1□□□□□ -0.15
SNCA-203ENST00000394986 GAGE12IP0CL82 117 aa14.1□□□□□ -0.15
SNCA-203ENST00000394986 TCL1AP56279 114 aa14.1□□□□□ -0.15
SNCA-203ENST00000394986 Q6ZTI0 123 aa14.1□□□□□ -0.15
SNCA-203ENST00000394986 GNRH2O43555 120 aa14.09□□□□□ -0.15
SNCA-203ENST00000394986 PFN1P07737 140 aaKnown RBP14.09□□□□□ -0.15
SNCA-203ENST00000394986 DAZ2Q13117 558 aaKnown RBP14.09□□□□□ -0.15
SNCA-203ENST00000394986 IBA57Q5T440 356 aaKnown RBP14.09□□□□□ -0.15
SNCA-203ENST00000394986 LTAP01374 205 aa14.08□□□□□ -0.15
SNCA-203ENST00000394986 IFNA1P01562 189 aa14.08□□□□□ -0.15
SNCA-203ENST00000394986 TYMSP04818 313 aa14.08□□□□□ -0.15
SNCA-203ENST00000394986 BCL2P10415 239 aa14.08□□□□□ -0.15
SNCA-203ENST00000394986 BLOC1S1P78537 153 aa14.08□□□□□ -0.15
SNCA-203ENST00000394986 ZNF415Q09FC8 603 aa14.08□□□□□ -0.15
SNCA-203ENST00000394986 TDRG1Q3Y452 100 aa14.08□□□□□ -0.15
SNCA-203ENST00000394986 LINC00612Q8N6U2 182 aa14.08□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms