RNA–Protein interactions for RNA: ENST00000393387.5

PHF3-202, Transcript of PHD finger protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PHF3, Length 6,947 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF3-202ENST00000393387 C11orf52Q96A22 123 aa2.57□□□□□ -2
PHF3-202ENST00000393387 C9orf85Q96MD7 179 aa2.57□□□□□ -2
PHF3-202ENST00000393387 NOP10Q9NPE3 64 aaKnown RBP2.57□□□□□ -2
PHF3-202ENST00000393387 MSRB1Q9NZV6 116 aa2.57□□□□□ -2
PHF3-202ENST00000393387 BAZ2AQ9UIF9 1905 aaKnown RBP2.57□□□□□ -2
PHF3-202ENST00000393387 IFT172Q9UG01 1749 aa2.57□□□□□ -2
PHF3-202ENST00000393387 IGKV1-6A0A0C4DH72 117 aa2.57□□□□□ -2
PHF3-202ENST00000393387 TMEM89A2RUT3 159 aa2.57□□□□□ -2
PHF3-202ENST00000393387 RUSC1-AS1Q66K80 236 aa2.57□□□□□ -2
PHF3-202ENST00000393387 SPEF2Q9C093 1822 aa2.57□□□□□ -2
PHF3-202ENST00000393387 TNRC6BQ9UPQ9 1833 aaKnown RBP2.57□□□□□ -2
PHF3-202ENST00000393387 LYRM9A8MSI8 78 aa2.56□□□□□ -2
PHF3-202ENST00000393387 JMJD7-PLA2G4BH0Y9G9 81 aa2.56□□□□□ -2
PHF3-202ENST00000393387 MIFP14174 115 aa2.56□□□□□ -2
PHF3-202ENST00000393387 MIR7-3HGQ8N6C7 128 aa2.56□□□□□ -2
PHF3-202ENST00000393387 PLA2G2EQ9NZK7 142 aa2.56□□□□□ -2
PHF3-202ENST00000393387 E9PCH4 1651 aa2.56□□□□□ -2
PHF3-202ENST00000393387 NAV1Q8NEY1 1877 aa2.56□□□□□ -2
PHF3-202ENST00000393387 KCPQ6ZWJ8 1503 aa2.56□□□□□ -2
PHF3-202ENST00000393387 H0YGX0 51 aa2.56□□□□□ -2
PHF3-202ENST00000393387 H0YJW9 148 aa2.56□□□□□ -2
PHF3-202ENST00000393387 SPINK6Q6UWN8 80 aa2.56□□□□□ -2
PHF3-202ENST00000393387 A0A087WZ39 114 aa2.56□□□□□ -2
PHF3-202ENST00000393387 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP2.56□□□□□ -2
PHF3-202ENST00000393387 TMEM256-PLSCR3K7ERE1 68 aa2.56□□□□□ -2
PHF3-202ENST00000393387 DIRC1Q969H9 104 aa2.56□□□□□ -2
PHF3-202ENST00000393387 HIGD1BQ9P298 99 aa2.56□□□□□ -2
PHF3-202ENST00000393387 NDUFA4O00483 81 aa2.56□□□□□ -2
PHF3-202ENST00000393387 ATP5EP56381 51 aaPredicted RBP2.56□□□□□ -2
PHF3-202ENST00000393387 LINC01545Q5VT33 79 aa2.56□□□□□ -2
PHF3-202ENST00000393387 FAM223AQ8IWN6 122 aa2.56□□□□□ -2
PHF3-202ENST00000393387 NUMA1Q14980 2115 aa2.56□□□□□ -2
PHF3-202ENST00000393387 IGKV1-16P04430 117 aa2.56□□□□□ -2
PHF3-202ENST00000393387 WT1P19544 449 aaPredicted RBP2.56□□□□□ -2
PHF3-202ENST00000393387 RPL34P49207 117 aaKnown RBP2.56□□□□□ -2
PHF3-202ENST00000393387 C20orf204Q6ZNR8 217 aa2.56□□□□□ -2
PHF3-202ENST00000393387 LINC00269Q8N2A0 174 aa2.56□□□□□ -2
PHF3-202ENST00000393387 RNF166Q96A37 237 aaPredicted RBP2.56□□□□□ -2
PHF3-202ENST00000393387 COX14Q96I36 57 aa2.56□□□□□ -2
PHF3-202ENST00000393387 CHD2O14647 1828 aaKnown RBP2.56□□□□□ -2
PHF3-202ENST00000393387 PLA2G5P39877 138 aa2.56□□□□□ -2
PHF3-202ENST00000393387 Q8N9L7 120 aa2.56□□□□□ -2
PHF3-202ENST00000393387 KIR2DL5BQ8NHK3 375 aa2.56□□□□□ -2
PHF3-202ENST00000393387 PRO0628Q9UI54 55 aa2.56□□□□□ -2
PHF3-202ENST00000393387 C3P01024 1663 aa2.55□□□□□ -2
PHF3-202ENST00000393387 GON4LQ3T8J9 2241 aa2.55□□□□□ -2
PHF3-202ENST00000393387 AJUBAQ96IF1 538 aa2.55□□□□□ -2
PHF3-202ENST00000393387 PRR25Q96S07 402 aa2.55□□□□□ -2
PHF3-202ENST00000393387 SPRY4Q9C004 299 aa2.55□□□□□ -2
PHF3-202ENST00000393387 ZMAT4Q9H898 229 aa2.55□□□□□ -2
PHF3-202ENST00000393387 SHPRHQ149N8 1683 aa2.55□□□□□ -2
PHF3-202ENST00000393387 COX7BP24311 80 aa2.55□□□□□ -2
PHF3-202ENST00000393387 FHL5Q5TD97 284 aa2.55□□□□□ -2
PHF3-202ENST00000393387 C5orf67F2Z3F1 127 aa2.55□□□□□ -2
PHF3-202ENST00000393387 PSPNO60542 156 aa2.55□□□□□ -2
PHF3-202ENST00000393387 ZNF134P52741 427 aa2.55□□□□□ -2
PHF3-202ENST00000393387 Q6ZQY7 126 aa2.55□□□□□ -2
PHF3-202ENST00000393387 FAM19A3Q7Z5A8 133 aa2.55□□□□□ -2
PHF3-202ENST00000393387 PPRC1Q5VV67 1664 aaKnown RBP2.55□□□□□ -2
PHF3-202ENST00000393387 C11orf86A6NJI1 115 aa2.55□□□□□ -2
PHF3-202ENST00000393387 TRIAP1O43715 76 aa2.55□□□□□ -2
PHF3-202ENST00000393387 LINC00271P0C7V0 271 aa2.55□□□□□ -2
PHF3-202ENST00000393387 MINOS1Q5TGZ0 78 aa2.55□□□□□ -2
PHF3-202ENST00000393387 IGF2-ASQ6U949 168 aa2.55□□□□□ -2
PHF3-202ENST00000393387 PROK2Q9HC23 129 aa2.55□□□□□ -2
PHF3-202ENST00000393387 TRBV7-1A0A0A6YYK4 115 aa2.55□□□□□ -2
PHF3-202ENST00000393387 TRBV7-6A0A0J9YX20 115 aa2.55□□□□□ -2
PHF3-202ENST00000393387 P0DMU3 169 aa2.55□□□□□ -2
PHF3-202ENST00000393387 FAM231AP0DMU4 169 aa2.55□□□□□ -2
PHF3-202ENST00000393387 FAM231CP0DMU5 169 aa2.55□□□□□ -2
PHF3-202ENST00000393387 LHFPL1Q86WI0 220 aa2.55□□□□□ -2
PHF3-202ENST00000393387 TPSG1Q9NRR2 321 aa2.55□□□□□ -2
PHF3-202ENST00000393387 LRRC37A3O60309 1634 aa2.55□□□□□ -2
PHF3-202ENST00000393387 GOLGA4Q13439 2230 aaKnown RBP2.54□□□□□ -2
PHF3-202ENST00000393387 IGHV7-81A0A0B4J1V7 117 aa2.54□□□□□ -2
PHF3-202ENST00000393387 G3V318 75 aa2.54□□□□□ -2
PHF3-202ENST00000393387 H3BUX3 64 aa2.54□□□□□ -2
PHF3-202ENST00000393387 IGF1P05019 195 aa2.54□□□□□ -2
PHF3-202ENST00000393387 SPAG11AQ6PDA7 123 aa2.54□□□□□ -2
PHF3-202ENST00000393387 HIGD2AQ9BW72 106 aa2.54□□□□□ -2
PHF3-202ENST00000393387 RIMBP3CA6NJZ7 1639 aa2.54□□□□□ -2
PHF3-202ENST00000393387 RIMBP3BA6NNM3 1639 aa2.54□□□□□ -2
PHF3-202ENST00000393387 RIMBP3Q9UFD9 1639 aa2.54□□□□□ -2
PHF3-202ENST00000393387 PPLO60437 1756 aa2.54□□□□□ -2
PHF3-202ENST00000393387 Q6P435 159 aa2.54□□□□□ -2
PHF3-202ENST00000393387 NRGNQ92686 78 aa2.54□□□□□ -2
PHF3-202ENST00000393387 IGKV2-24A0A0C4DH68 120 aa2.54□□□□□ -2
PHF3-202ENST00000393387 TMEM223A0PJW6 202 aa2.54□□□□□ -2
PHF3-202ENST00000393387 TNFRSF13BO14836 293 aaPredicted RBP2.54□□□□□ -2
PHF3-202ENST00000393387 LY6HO94772 140 aa2.54□□□□□ -2
PHF3-202ENST00000393387 LYPD2Q6UXB3 125 aa2.54□□□□□ -2
PHF3-202ENST00000393387 ANKRD31Q8N7Z5 1873 aa2.54□□□□□ -2
PHF3-202ENST00000393387 TRIP11Q15643 1979 aa2.54□□□□□ -2
PHF3-202ENST00000393387 ATP6V0E1O15342 81 aa2.54□□□□□ -2
PHF3-202ENST00000393387 DEFB116Q30KQ4 102 aa2.54□□□□□ -2
PHF3-202ENST00000393387 MAPK1IP1LQ8NDC0 245 aa2.54□□□□□ -2
PHF3-202ENST00000393387 NINQ8N4C6 2090 aa2.54□□□□□ -2
PHF3-202ENST00000393387 IGKV1D-37A0A075B6S9 117 aa2.54□□□□□ -2
PHF3-202ENST00000393387 C17orf100A8MU93 164 aa2.54□□□□□ -2
PHF3-202ENST00000393387 H3BRN7 92 aa2.54□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 125.4 ms