RNA–Protein interactions for RNA: ENST00000392455.7

CCDC50-201, Transcript of coiled-coil domain containing 50, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CCDC50, Length 8,429 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50-201ENST00000392455 TMEM219Q86XT9 240 aa11.93□□□□□ -0.5
CCDC50-201ENST00000392455 A0A087WWL8 130 aa11.93□□□□□ -0.5
CCDC50-201ENST00000392455 ZNF134P52741 427 aa11.93□□□□□ -0.5
CCDC50-201ENST00000392455 NMSQ5H8A3 153 aa11.93□□□□□ -0.5
CCDC50-201ENST00000392455 LINC00114Q6XXX2 140 aa11.93□□□□□ -0.5
CCDC50-201ENST00000392455 ZNF493Q6ZR52 646 aa11.93□□□□□ -0.5
CCDC50-201ENST00000392455 DMRTC2Q8IXT2 367 aaPredicted RBP11.93□□□□□ -0.5
CCDC50-201ENST00000392455 ANGP03950 147 aaKnown RBP11.93□□□□□ -0.5
CCDC50-201ENST00000392455 GLRX5Q86SX6 157 aa11.93□□□□□ -0.5
CCDC50-201ENST00000392455 CASC2Q6XLA1 102 aa11.93□□□□□ -0.5
CCDC50-201ENST00000392455 Q6ZS49 121 aa11.93□□□□□ -0.5
CCDC50-201ENST00000392455 H0YJW9 148 aa11.92□□□□□ -0.5
CCDC50-201ENST00000392455 J3QQQ9 107 aa11.92□□□□□ -0.5
CCDC50-201ENST00000392455 IGHV1OR15-1A0A075B7D0 117 aa11.92□□□□□ -0.5
CCDC50-201ENST00000392455 SDHAF1A6NFY7 115 aa11.92□□□□□ -0.5
CCDC50-201ENST00000392455 LINC01619G3V211 115 aa11.92□□□□□ -0.5
CCDC50-201ENST00000392455 IGLV3-19P01714 112 aa11.92□□□□□ -0.5
CCDC50-201ENST00000392455 LAIR2Q6ISS4 152 aa11.92□□□□□ -0.5
CCDC50-201ENST00000392455 IGLL5B9A064 214 aa11.92□□□□□ -0.5
CCDC50-201ENST00000392455 TMEM178BH3BS89 294 aa11.92□□□□□ -0.5
CCDC50-201ENST00000392455 CXCL1P09341 107 aa11.92□□□□□ -0.5
CCDC50-201ENST00000392455 DEFB125Q8N687 156 aa11.92□□□□□ -0.5
CCDC50-201ENST00000392455 UBE2E2Q96LR5 201 aa11.92□□□□□ -0.5
CCDC50-201ENST00000392455 FNDC1Q4ZHG4 1894 aaPredicted RBP11.91□□□□□ -0.5
CCDC50-201ENST00000392455 IGLC2P0DOY2 106 aa11.91□□□□□ -0.5
CCDC50-201ENST00000392455 IGLC3P0DOY3 106 aa11.91□□□□□ -0.5
CCDC50-201ENST00000392455 TMEM256-PLSCR3K7ERE1 68 aa11.91□□□□□ -0.5
CCDC50-201ENST00000392455 CXCL5P42830 114 aa11.91□□□□□ -0.5
CCDC50-201ENST00000392455 CLPSP04118 112 aa11.91□□□□□ -0.5
CCDC50-201ENST00000392455 MSRB2Q9Y3D2 182 aa11.91□□□□□ -0.5
CCDC50-201ENST00000392455 J3QLI3 93 aa11.91□□□□□ -0.5
CCDC50-201ENST00000392455 NDUFA4O00483 81 aa11.91□□□□□ -0.5
CCDC50-201ENST00000392455 TM2D2Q9BX73 214 aa11.91□□□□□ -0.5
CCDC50-201ENST00000392455 WDR90Q96KV7 1748 aa11.91□□□□□ -0.5
CCDC50-201ENST00000392455 PINLYPA6NC86 204 aa11.91□□□□□ -0.5
CCDC50-201ENST00000392455 CRYGCP07315 174 aa11.91□□□□□ -0.5
CCDC50-201ENST00000392455 TMEM200BQ69YZ2 307 aa11.91□□□□□ -0.5
CCDC50-201ENST00000392455 NAA38Q9BRA0 125 aaKnown RBP11.91□□□□□ -0.5
CCDC50-201ENST00000392455 H3BUX3 64 aa11.9□□□□□ -0.5
CCDC50-201ENST00000392455 IGHV1-46P01743 117 aa11.9□□□□□ -0.5
CCDC50-201ENST00000392455 BUB3O43684 328 aa11.9□□□□□ -0.5
CCDC50-201ENST00000392455 FOXF2Q12947 444 aa11.9□□□□□ -0.5
CCDC50-201ENST00000392455 TMEM14CQ9P0S9 112 aa11.9□□□□□ -0.51
CCDC50-201ENST00000392455 LENEPQ9Y5L5 61 aa11.9□□□□□ -0.51
CCDC50-201ENST00000392455 FXYD7P58549 80 aa11.89□□□□□ -0.51
CCDC50-201ENST00000392455 TECTAO75443 2155 aa11.89□□□□□ -0.51
CCDC50-201ENST00000392455 TIRAPP58753 221 aa11.89□□□□□ -0.51
CCDC50-201ENST00000392455 FAM231DQ6ZW35 169 aa11.89□□□□□ -0.51
CCDC50-201ENST00000392455 DEFB104AQ8WTQ1 72 aa11.89□□□□□ -0.51
CCDC50-201ENST00000392455 C5orf63A6NC05 138 aa11.89□□□□□ -0.51
CCDC50-201ENST00000392455 DAZ2Q13117 558 aaKnown RBP11.89□□□□□ -0.51
CCDC50-201ENST00000392455 DAZ4Q86SG3 579 aaKnown RBP11.89□□□□□ -0.51
CCDC50-201ENST00000392455 DAZ3Q9NR90 486 aaKnown RBP11.89□□□□□ -0.51
CCDC50-201ENST00000392455 TINCRA0A1B0GVN0 87 aa11.88□□□□□ -0.51
CCDC50-201ENST00000392455 ZNF672Q499Z4 452 aaPredicted RBP11.88□□□□□ -0.51
CCDC50-201ENST00000392455 ATRAIDQ6UW56 229 aa11.88□□□□□ -0.51
CCDC50-201ENST00000392455 NDUFC1O43677 76 aa11.88□□□□□ -0.51
CCDC50-201ENST00000392455 C17orf77Q96MU5 243 aa11.88□□□□□ -0.51
CCDC50-201ENST00000392455 MST1LQ2TV78 715 aa11.87□□□□□ -0.51
CCDC50-201ENST00000392455 ZNF664Q8N3J9 261 aa11.87□□□□□ -0.51
CCDC50-201ENST00000392455 RPP25LQ8N5L8 163 aaKnown RBP11.87□□□□□ -0.51
CCDC50-201ENST00000392455 CSRP3P50461 194 aa11.87□□□□□ -0.51
CCDC50-201ENST00000392455 IGLV3-12A0A075B6K2 115 aa11.87□□□□□ -0.51
CCDC50-201ENST00000392455 CFHR1Q03591 330 aa11.87□□□□□ -0.51
CCDC50-201ENST00000392455 FGFBP3Q8TAT2 258 aa11.87□□□□□ -0.51
CCDC50-201ENST00000392455 IGHV1-69DA0A0B4J2H0 117 aa11.86□□□□□ -0.51
CCDC50-201ENST00000392455 A0A087WV48 116 aa11.86□□□□□ -0.51
CCDC50-201ENST00000392455 ETV2O00321 342 aaPredicted RBP11.86□□□□□ -0.51
CCDC50-201ENST00000392455 ZNF362Q5T0B9 420 aaPredicted RBP11.86□□□□□ -0.51
CCDC50-201ENST00000392455 VWCEQ96DN2 955 aa11.86□□□□□ -0.51
CCDC50-201ENST00000392455 PTPN13Q12923 2485 aa11.86□□□□□ -0.51
CCDC50-201ENST00000392455 LY6G6FQ5SQ64 297 aa11.86□□□□□ -0.51
CCDC50-201ENST00000392455 SRSF3P84103 164 aaKnown RBP11.86□□□□□ -0.51
CCDC50-201ENST00000392455 PAX9P55771 341 aa11.86□□□□□ -0.51
CCDC50-201ENST00000392455 FAM240AA0A1B0GVK7 77 aa11.86□□□□□ -0.51
CCDC50-201ENST00000392455 CFC1BP0CG36 223 aa11.86□□□□□ -0.51
CCDC50-201ENST00000392455 CFC1P0CG37 223 aa11.86□□□□□ -0.51
CCDC50-201ENST00000392455 IGKV1-9A0A0C4DH69 117 aa11.86□□□□□ -0.51
CCDC50-201ENST00000392455 H3BUA1 57 aa11.86□□□□□ -0.51
CCDC50-201ENST00000392455 Q8TAT8 98 aa11.86□□□□□ -0.51
CCDC50-201ENST00000392455 C18orf32Q8TCD1 76 aa11.85□□□□□ -0.51
CCDC50-201ENST00000392455 LTAP01374 205 aa11.85□□□□□ -0.51
CCDC50-201ENST00000392455 ZFP36L1Q07352 338 aaKnown RBP11.85□□□□□ -0.51
CCDC50-201ENST00000392455 C14orf177Q52M58 125 aa11.85□□□□□ -0.51
CCDC50-201ENST00000392455 LYRM9A8MSI8 78 aa11.85□□□□□ -0.51
CCDC50-201ENST00000392455 CSRP1P21291 193 aaKnown RBP11.85□□□□□ -0.51
CCDC50-201ENST00000392455 DEFB131AP59861 70 aa11.85□□□□□ -0.51
CCDC50-201ENST00000392455 NDPQ00604 133 aa11.85□□□□□ -0.51
CCDC50-201ENST00000392455 LHFPL1Q86WI0 220 aa11.85□□□□□ -0.51
CCDC50-201ENST00000392455 SMIM27A0A1W2PRY6 76 aa11.85□□□□□ -0.51
CCDC50-201ENST00000392455 RBAKDNA6NC62 111 aa11.85□□□□□ -0.51
CCDC50-201ENST00000392455 NUP210Q8TEM1 1887 aaPredicted RBP11.85□□□□□ -0.51
CCDC50-201ENST00000392455 FAM110DQ8TAY7 271 aaPredicted RBP11.85□□□□□ -0.51
CCDC50-201ENST00000392455 MRPL53Q96EL3 112 aaKnown RBP11.85□□□□□ -0.51
CCDC50-201ENST00000392455 B5MCH6 92 aa11.84□□□□□ -0.51
CCDC50-201ENST00000392455 CEP192Q8TEP8 1941 aa11.84□□□□□ -0.51
CCDC50-201ENST00000392455 DOPEY1Q5JWR5 2465 aa11.84□□□□□ -0.51
CCDC50-201ENST00000392455 H3BMG7 143 aa11.84□□□□□ -0.51
CCDC50-201ENST00000392455 IGKV1-5P01602 117 aa11.84□□□□□ -0.51
CCDC50-201ENST00000392455 GNLYP22749 145 aa11.83□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 77.1 ms