RNA–Protein interactions for RNA: ENST00000389629.8

RTF1-201, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTF1, Length 5,021 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-201ENST00000389629 A0A1B0GXF2 115 aa11.28□□□□□ -0.6
RTF1-201ENST00000389629 LY6HO94772 140 aa11.28□□□□□ -0.6
RTF1-201ENST00000389629 C5orf64Q2M2E5 130 aa11.28□□□□□ -0.6
RTF1-201ENST00000389629 C2orf66Q6UXQ4 117 aa11.28□□□□□ -0.6
RTF1-201ENST00000389629 C2orf82Q6UX34 121 aa11.28□□□□□ -0.6
RTF1-201ENST00000389629 TMEM14CQ9P0S9 112 aa11.28□□□□□ -0.6
RTF1-201ENST00000389629 NEGR1Q7Z3B1 354 aa11.27□□□□□ -0.6
RTF1-201ENST00000389629 ZNF672Q499Z4 452 aaPredicted RBP11.27□□□□□ -0.61
RTF1-201ENST00000389629 KLF12Q9Y4X4 402 aa11.27□□□□□ -0.61
RTF1-201ENST00000389629 TRBV20-1A0A075B6N2 111 aa11.27□□□□□ -0.61
RTF1-201ENST00000389629 RNASE1P07998 156 aaKnown RBP11.26□□□□□ -0.61
RTF1-201ENST00000389629 IGKV3OR2-268A0A0C4DH90 116 aa11.26□□□□□ -0.61
RTF1-201ENST00000389629 A0A1W2PNU3 283 aaPredicted RBP11.26□□□□□ -0.61
RTF1-201ENST00000389629 LINC00311Q8N616 119 aa11.26□□□□□ -0.61
RTF1-201ENST00000389629 RNF5Q99942 180 aa11.26□□□□□ -0.61
RTF1-201ENST00000389629 DPH3P1Q9H4G8 78 aa11.26□□□□□ -0.61
RTF1-201ENST00000389629 H3BRN7 92 aa11.26□□□□□ -0.61
RTF1-201ENST00000389629 SPRY2O43597 315 aa11.26□□□□□ -0.61
RTF1-201ENST00000389629 IGHV3OR16-12A0A075B7B8 117 aa11.26□□□□□ -0.61
RTF1-201ENST00000389629 F8VRH5 84 aa11.26□□□□□ -0.61
RTF1-201ENST00000389629 MBD6Q96DN6 1003 aa11.26□□□□□ -0.61
RTF1-201ENST00000389629 FAM215AQ9Y5M1 114 aa11.25□□□□□ -0.61
RTF1-201ENST00000389629 TANC2Q9HCD6 1990 aa11.25□□□□□ -0.61
RTF1-201ENST00000389629 NAV3Q8IVL0 2385 aa11.25□□□□□ -0.61
RTF1-201ENST00000389629 ZNF491Q8N8L2 437 aa11.25□□□□□ -0.61
RTF1-201ENST00000389629 A0A087WWL8 130 aa11.25□□□□□ -0.61
RTF1-201ENST00000389629 DNAL4O96015 105 aa11.25□□□□□ -0.61
RTF1-201ENST00000389629 SIGLEC15Q6ZMC9 328 aa11.25□□□□□ -0.61
RTF1-201ENST00000389629 TNFRSF18Q9Y5U5 241 aa11.25□□□□□ -0.61
RTF1-201ENST00000389629 TMEM190Q8WZ59 177 aa11.24□□□□□ -0.61
RTF1-201ENST00000389629 E7EQL1 145 aa11.24□□□□□ -0.61
RTF1-201ENST00000389629 IGFBPL1Q8WX77 278 aa11.24□□□□□ -0.61
RTF1-201ENST00000389629 MKI67P46013 3256 aaKnown RBP11.24□□□□□ -0.61
RTF1-201ENST00000389629 CR1LQ2VPA4 569 aa11.24□□□□□ -0.61
RTF1-201ENST00000389629 CRYBA4P53673 196 aa11.24□□□□□ -0.61
RTF1-201ENST00000389629 CTSZQ9UBR2 303 aa11.24□□□□□ -0.61
RTF1-201ENST00000389629 DKK4Q9UBT3 224 aa11.24□□□□□ -0.61
RTF1-201ENST00000389629 C19orf71A6NCJ1 209 aa11.23□□□□□ -0.61
RTF1-201ENST00000389629 K7EM74 188 aa11.23□□□□□ -0.61
RTF1-201ENST00000389629 M0R2P5 195 aa11.23□□□□□ -0.61
RTF1-201ENST00000389629 C19orf54Q5BKX5 351 aa11.23□□□□□ -0.61
RTF1-201ENST00000389629 C1QTNF4Q9BXJ3 329 aa11.23□□□□□ -0.61
RTF1-201ENST00000389629 SPRY4Q9C004 299 aa11.23□□□□□ -0.61
RTF1-201ENST00000389629 TP53TG1Q9Y2A0 90 aa11.23□□□□□ -0.61
RTF1-201ENST00000389629 TCF15Q12870 199 aa11.23□□□□□ -0.61
RTF1-201ENST00000389629 ATXN8Q156A1 80 aa11.23□□□□□ -0.61
RTF1-201ENST00000389629 TAL2Q16559 108 aa11.23□□□□□ -0.61
RTF1-201ENST00000389629 Q6ZS92 163 aa11.23□□□□□ -0.61
RTF1-201ENST00000389629 A0A087WX48 190 aa11.23□□□□□ -0.61
RTF1-201ENST00000389629 CD28P10747 220 aa11.23□□□□□ -0.61
RTF1-201ENST00000389629 OR11H6Q8NGC7 330 aa11.23□□□□□ -0.61
RTF1-201ENST00000389629 IGKV1D-37A0A075B6S9 117 aa11.22□□□□□ -0.61
RTF1-201ENST00000389629 TRAV8-3A0A0A6YYJ7 113 aa11.22□□□□□ -0.61
RTF1-201ENST00000389629 C1orf159Q96HA4 380 aa11.22□□□□□ -0.61
RTF1-201ENST00000389629 SPAG8Q99932 426 aaPredicted RBP11.22□□□□□ -0.61
RTF1-201ENST00000389629 NCKAP5O14513 1909 aa11.22□□□□□ -0.61
RTF1-201ENST00000389629 SPG11Q96JI7 2443 aa11.22□□□□□ -0.61
RTF1-201ENST00000389629 ZNF688P0C7X2 276 aa11.22□□□□□ -0.61
RTF1-201ENST00000389629 CGB3P0DN86 165 aa11.22□□□□□ -0.61
RTF1-201ENST00000389629 CGB7P0DN87 165 aa11.22□□□□□ -0.61
RTF1-201ENST00000389629 C20orf78Q9BR46 151 aa11.22□□□□□ -0.61
RTF1-201ENST00000389629 LAMA3Q16787 3333 aa11.22□□□□□ -0.61
RTF1-201ENST00000389629 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.21□□□□□ -0.61
RTF1-201ENST00000389629 IGKV1-17P01599 117 aa11.21□□□□□ -0.61
RTF1-201ENST00000389629 FGF6P10767 208 aa11.21□□□□□ -0.61
RTF1-201ENST00000389629 VMO1Q7Z5L0 202 aa11.21□□□□□ -0.61
RTF1-201ENST00000389629 PTH2Q96A98 100 aa11.21□□□□□ -0.61
RTF1-201ENST00000389629 SPXQ9BT56 116 aa11.21□□□□□ -0.61
RTF1-201ENST00000389629 PRSS29PA6NIE9 313 aa11.21□□□□□ -0.61
RTF1-201ENST00000389629 NPFFO15130 113 aa11.21□□□□□ -0.61
RTF1-201ENST00000389629 PAX8Q06710 450 aa11.21□□□□□ -0.61
RTF1-201ENST00000389629 OR13C6PQ8NH95 151 aa11.21□□□□□ -0.61
RTF1-201ENST00000389629 SMIM2Q9BVW6 85 aa11.21□□□□□ -0.61
RTF1-201ENST00000389629 PRSS22Q9GZN4 317 aa11.21□□□□□ -0.62
RTF1-201ENST00000389629 SLC25A20O43772 301 aa11.2□□□□□ -0.62
RTF1-201ENST00000389629 WT1P19544 449 aaPredicted RBP11.2□□□□□ -0.62
RTF1-201ENST00000389629 C8orf86Q6ZUL3 223 aa11.2□□□□□ -0.62
RTF1-201ENST00000389629 IGHV3-73A0A0B4J1V6 119 aa11.2□□□□□ -0.62
RTF1-201ENST00000389629 SNRPD3P62318 126 aaKnown RBP11.2□□□□□ -0.62
RTF1-201ENST00000389629 ZNF876PQ49A33 203 aa11.2□□□□□ -0.62
RTF1-201ENST00000389629 KLHL30-AS1Q8NEE0 82 aa11.2□□□□□ -0.62
RTF1-201ENST00000389629 PRO1854Q9UHT4 67 aa11.2□□□□□ -0.62
RTF1-201ENST00000389629 VCYO14598 125 aa11.19□□□□□ -0.62
RTF1-201ENST00000389629 TMEM219Q86XT9 240 aa11.19□□□□□ -0.62
RTF1-201ENST00000389629 DYNAPQ8N1N2 210 aa11.19□□□□□ -0.62
RTF1-201ENST00000389629 NTN5Q8WTR8 489 aaPredicted RBP11.19□□□□□ -0.62
RTF1-201ENST00000389629 BDP1A6H8Y1 2624 aa11.19□□□□□ -0.62
RTF1-201ENST00000389629 C2orf91Q6ZV80 131 aa11.19□□□□□ -0.62
RTF1-201ENST00000389629 PRSS33Q8NF86 280 aa11.19□□□□□ -0.62
RTF1-201ENST00000389629 IGLV2-23P01705 113 aa11.19□□□□□ -0.62
RTF1-201ENST00000389629 GAGE5Q13069 117 aa11.19□□□□□ -0.62
RTF1-201ENST00000389629 GAGE6Q13070 117 aa11.19□□□□□ -0.62
RTF1-201ENST00000389629 ODF1Q14990 250 aa11.18□□□□□ -0.62
RTF1-201ENST00000389629 MLST8Q9BVC4 326 aa11.18□□□□□ -0.62
RTF1-201ENST00000389629 C2CD3Q4AC94 2353 aa11.18□□□□□ -0.62
RTF1-201ENST00000389629 IFITM1P13164 125 aa11.18□□□□□ -0.62
RTF1-201ENST00000389629 CFHR4Q92496 578 aa11.18□□□□□ -0.62
RTF1-201ENST00000389629 TOMM7Q9P0U1 55 aa11.18□□□□□ -0.62
RTF1-201ENST00000389629 ZFHX2Q9C0A1 2572 aaPredicted RBP11.18□□□□□ -0.62
RTF1-201ENST00000389629 CEP192Q8TEP8 1941 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms