RNA–Protein interactions for RNA: ENST00000388940.8

SCFD2-201, Transcript of sec1 family domain containing 2, humanhuman

TSL 2 BASIC

Gene SCFD2, Length 2,221 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD2-201ENST00000388940 PIEZO1Q92508 2521 aa11.45□□□□□ -0.58
SCFD2-201ENST00000388940 IGKV3D-20A0A0C4DH25 116 aa11.45□□□□□ -0.58
SCFD2-201ENST00000388940 NDUFA4O00483 81 aa11.45□□□□□ -0.58
SCFD2-201ENST00000388940 IGHG2P01859 326 aa11.45□□□□□ -0.58
SCFD2-201ENST00000388940 HINT1P49773 126 aaPredicted RBP11.45□□□□□ -0.58
SCFD2-201ENST00000388940 VAMP3Q15836 100 aa11.45□□□□□ -0.58
SCFD2-201ENST00000388940 USMG5Q96IX5 58 aa11.45□□□□□ -0.58
SCFD2-201ENST00000388940 MSRB1Q9NZV6 116 aa11.45□□□□□ -0.58
SCFD2-201ENST00000388940 IGHV3-49A0A0A0MS15 119 aa11.44□□□□□ -0.58
SCFD2-201ENST00000388940 A6NDX4 124 aa11.44□□□□□ -0.58
SCFD2-201ENST00000388940 A6NJY4 79 aa11.44□□□□□ -0.58
SCFD2-201ENST00000388940 HBDP02042 147 aa11.44□□□□□ -0.58
SCFD2-201ENST00000388940 PPIFP30405 207 aaKnown RBP11.44□□□□□ -0.58
SCFD2-201ENST00000388940 C9orf139Q6ZV77 190 aa11.44□□□□□ -0.58
SCFD2-201ENST00000388940 DPF1Q92782 380 aa11.44□□□□□ -0.58
SCFD2-201ENST00000388940 TIMM8BQ9Y5J9 83 aaPredicted RBP11.44□□□□□ -0.58
SCFD2-201ENST00000388940 LENEPQ9Y5L5 61 aa11.44□□□□□ -0.58
SCFD2-201ENST00000388940 LGALS9BQ3B8N2 356 aa11.44□□□□□ -0.58
SCFD2-201ENST00000388940 LGALS9CQ6DKI2 356 aa11.44□□□□□ -0.58
SCFD2-201ENST00000388940 MCRIP2Q9BUT9 160 aaKnown RBP11.44□□□□□ -0.58
SCFD2-201ENST00000388940 LINC00527Q9UJ94 153 aa11.44□□□□□ -0.58
SCFD2-201ENST00000388940 H0Y8G0 127 aa11.43□□□□□ -0.58
SCFD2-201ENST00000388940 SMKR1H3BMG3 65 aa11.43□□□□□ -0.58
SCFD2-201ENST00000388940 NCR2O95944 276 aa11.43□□□□□ -0.58
SCFD2-201ENST00000388940 IGHV4-38-2P0DP08 117 aa11.43□□□□□ -0.58
SCFD2-201ENST00000388940 C11orf21Q9P2W6 132 aa11.43□□□□□ -0.58
SCFD2-201ENST00000388940 ITPR1Q14643 2758 aa11.43□□□□□ -0.58
SCFD2-201ENST00000388940 AKAP6Q13023 2319 aa11.43□□□□□ -0.58
SCFD2-201ENST00000388940 C16orf92Q96LL3 132 aa11.43□□□□□ -0.58
SCFD2-201ENST00000388940 MAP1LC3AQ9H492 121 aa11.43□□□□□ -0.58
SCFD2-201ENST00000388940 CSMD1Q96PZ7 3565 aa11.43□□□□□ -0.58
SCFD2-201ENST00000388940 PRSS57Q6UWY2 283 aa11.42□□□□□ -0.58
SCFD2-201ENST00000388940 CACNA1BQ00975 2339 aa11.42□□□□□ -0.58
SCFD2-201ENST00000388940 ATP5J2P56134 94 aa11.41□□□□□ -0.58
SCFD2-201ENST00000388940 OR8A1Q8NGG7 326 aa11.41□□□□□ -0.58
SCFD2-201ENST00000388940 PMCHL2Q9BQD1 86 aa11.41□□□□□ -0.58
SCFD2-201ENST00000388940 IGHV4-4A0A075B6R2 117 aa11.41□□□□□ -0.58
SCFD2-201ENST00000388940 IGHV4-30-2A0A087WSY4 118 aa11.41□□□□□ -0.58
SCFD2-201ENST00000388940 H3BUX3 64 aa11.41□□□□□ -0.58
SCFD2-201ENST00000388940 MSMBP08118 114 aa11.41□□□□□ -0.58
SCFD2-201ENST00000388940 Q6ZVH6 145 aa11.41□□□□□ -0.58
SCFD2-201ENST00000388940 IGHV7-4-1A0A0J9YVY3 117 aa11.4□□□□□ -0.58
SCFD2-201ENST00000388940 SMAD7O15105 426 aaKnown RBP11.4□□□□□ -0.58
SCFD2-201ENST00000388940 COX8AP10176 69 aa11.4□□□□□ -0.58
SCFD2-201ENST00000388940 CFAP161Q6P656 301 aa11.4□□□□□ -0.58
SCFD2-201ENST00000388940 UNQ9165/PRO28630Q6UXU0 137 aa11.4□□□□□ -0.58
SCFD2-201ENST00000388940 LINC00477Q96M19 166 aa11.4□□□□□ -0.58
SCFD2-201ENST00000388940 NXT2Q9NPJ8 142 aaKnown RBP11.4□□□□□ -0.58
SCFD2-201ENST00000388940 SOCS3O14543 225 aa11.4□□□□□ -0.58
SCFD2-201ENST00000388940 SNAI2O43623 268 aa11.4□□□□□ -0.58
SCFD2-201ENST00000388940 TNFRSF6BO95407 300 aa11.4□□□□□ -0.58
SCFD2-201ENST00000388940 TRBV12-3P01733 135 aa11.4□□□□□ -0.58
SCFD2-201ENST00000388940 LY6EQ16553 131 aa11.4□□□□□ -0.58
SCFD2-201ENST00000388940 GPHB5Q86YW7 130 aa11.4□□□□□ -0.58
SCFD2-201ENST00000388940 IFI27L1Q96BM0 104 aa11.4□□□□□ -0.58
SCFD2-201ENST00000388940 TMEM8BA6NDV4 472 aa11.39□□□□□ -0.59
SCFD2-201ENST00000388940 OVOL1O14753 267 aa11.39□□□□□ -0.59
SCFD2-201ENST00000388940 CACNG7P62955 275 aa11.39□□□□□ -0.59
SCFD2-201ENST00000388940 DEFB125Q8N687 156 aa11.39□□□□□ -0.59
SCFD2-201ENST00000388940 OR1N2Q8NGR9 330 aa11.39□□□□□ -0.59
SCFD2-201ENST00000388940 C20orf173Q96LM9 149 aa11.39□□□□□ -0.59
SCFD2-201ENST00000388940 CLUHP3Q96NS8 147 aa11.39□□□□□ -0.59
SCFD2-201ENST00000388940 ASH1LQ9NR48 2969 aaKnown RBP11.39□□□□□ -0.59
SCFD2-201ENST00000388940 IGLV1-40P01703 118 aa11.39□□□□□ -0.59
SCFD2-201ENST00000388940 C12orf54Q6X4T0 127 aa11.39□□□□□ -0.59
SCFD2-201ENST00000388940 TP73-AS1Q9UF72 201 aa11.39□□□□□ -0.59
SCFD2-201ENST00000388940 FCER1GP30273 86 aa11.38□□□□□ -0.59
SCFD2-201ENST00000388940 MPV17L2Q567V2 206 aa11.38□□□□□ -0.59
SCFD2-201ENST00000388940 ZNF580Q9UK33 172 aa11.38□□□□□ -0.59
SCFD2-201ENST00000388940 A0A0G2JLM5 398 aa11.37□□□□□ -0.59
SCFD2-201ENST00000388940 GAS8-AS1O95177 125 aa11.37□□□□□ -0.59
SCFD2-201ENST00000388940 SCGB1A1P11684 91 aa11.37□□□□□ -0.59
SCFD2-201ENST00000388940 FOXE3Q13461 319 aa11.37□□□□□ -0.59
SCFD2-201ENST00000388940 BVES-AS1Q5T3Y7 98 aa11.37□□□□□ -0.59
SCFD2-201ENST00000388940 B4DSR2 109 aa11.37□□□□□ -0.59
SCFD2-201ENST00000388940 NUDT3O95989 172 aa11.37□□□□□ -0.59
SCFD2-201ENST00000388940 GATA3P23771 443 aa11.37□□□□□ -0.59
SCFD2-201ENST00000388940 DSCR9P59020 149 aa11.37□□□□□ -0.59
SCFD2-201ENST00000388940 OR4X2Q8NGF9 303 aa11.37□□□□□ -0.59
SCFD2-201ENST00000388940 FXYD7P58549 80 aa11.36□□□□□ -0.59
SCFD2-201ENST00000388940 BLCAPP62952 87 aa11.36□□□□□ -0.59
SCFD2-201ENST00000388940 Q8N8P6 123 aa11.36□□□□□ -0.59
SCFD2-201ENST00000388940 OR10J6PQ8NGY7 276 aa11.36□□□□□ -0.59
SCFD2-201ENST00000388940 KLK15Q9H2R5 256 aa11.36□□□□□ -0.59
SCFD2-201ENST00000388940 IGLV2-18A0A075B6J9 118 aa11.36□□□□□ -0.59
SCFD2-201ENST00000388940 GAGE12BA1L429 117 aa11.36□□□□□ -0.59
SCFD2-201ENST00000388940 PF4V1P10720 104 aa11.36□□□□□ -0.59
SCFD2-201ENST00000388940 CFHR3Q02985 330 aa11.36□□□□□ -0.59
SCFD2-201ENST00000388940 PRR9Q5T870 116 aa11.36□□□□□ -0.59
SCFD2-201ENST00000388940 ZFAND2AQ8N6M9 145 aa11.36□□□□□ -0.59
SCFD2-201ENST00000388940 OR2K2Q8NGT1 345 aa11.36□□□□□ -0.59
SCFD2-201ENST00000388940 SMPXQ9UHP9 88 aa11.36□□□□□ -0.59
SCFD2-201ENST00000388940 EVI2AP22794 236 aa11.35□□□□□ -0.59
SCFD2-201ENST00000388940 FAM19A4Q96LR4 140 aa11.35□□□□□ -0.59
SCFD2-201ENST00000388940 TRBV7-9A0A0J9YWB2 115 aa11.35□□□□□ -0.59
SCFD2-201ENST00000388940 TAX1BP3O14907 124 aa11.35□□□□□ -0.59
SCFD2-201ENST00000388940 IGHV3-11P01762 117 aa11.35□□□□□ -0.59
SCFD2-201ENST00000388940 FGF6P10767 208 aa11.35□□□□□ -0.59
SCFD2-201ENST00000388940 LEPP41159 167 aa11.35□□□□□ -0.59
SCFD2-201ENST00000388940 C2orf91Q6ZV80 131 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 8.1 ms