RNA–Protein interactions for RNA: ENST00000384438.1

RNU6-1340P-201, Transcript of RNA, U6 small nuclear 1340, pseudogene, humanhuman

BASIC

Gene RNU6-1340P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1340P-201ENST00000384438 CST2P09228 141 aa-4.2□□□□□ -3.08
RNU6-1340P-201ENST00000384438 RBP1P09455 135 aa-4.2□□□□□ -3.08
RNU6-1340P-201ENST00000384438 CYBAP13498 195 aa-4.2□□□□□ -3.08
RNU6-1340P-201ENST00000384438 HLA-DRB4P13762 266 aa-4.2□□□□□ -3.08
RNU6-1340P-201ENST00000384438 CRYBB2P43320 205 aa-4.2□□□□□ -3.08
RNU6-1340P-201ENST00000384438 AESQ08117 197 aa-4.2□□□□□ -3.08
RNU6-1340P-201ENST00000384438 TMED1Q13445 227 aa-4.2□□□□□ -3.08
RNU6-1340P-201ENST00000384438 TAF7Q15545 349 aaPredicted RBP-4.2□□□□□ -3.08
RNU6-1340P-201ENST00000384438 BLOC1S2Q6QNY1 142 aa-4.2□□□□□ -3.08
RNU6-1340P-201ENST00000384438 NDUFA11Q86Y39 141 aa-4.2□□□□□ -3.08
RNU6-1340P-201ENST00000384438 EXOC8Q8IYI6 725 aa-4.2□□□□□ -3.08
RNU6-1340P-201ENST00000384438 PRELID3AQ96N28 172 aa-4.2□□□□□ -3.08
RNU6-1340P-201ENST00000384438 PBDC1Q9BVG4 233 aa-4.2□□□□□ -3.08
RNU6-1340P-201ENST00000384438 SLC35B3Q9H1N7 401 aa-4.2□□□□□ -3.08
RNU6-1340P-201ENST00000384438 ELOVL6Q9H5J4 265 aa-4.2□□□□□ -3.08
RNU6-1340P-201ENST00000384438 PFDN4Q9NQP4 134 aa-4.2□□□□□ -3.08
RNU6-1340P-201ENST00000384438 FARSBQ9NSD9 589 aaKnown RBP-4.2□□□□□ -3.08
RNU6-1340P-201ENST00000384438 CFL2Q9Y281 166 aa-4.2□□□□□ -3.08
RNU6-1340P-201ENST00000384438 HLA-DRB4X5D2U9 266 aa-4.2□□□□□ -3.08
RNU6-1340P-201ENST00000384438 GRIN2AQ12879 1464 aa-4.2□□□□□ -3.08
RNU6-1340P-201ENST00000384438 TECPR2O15040 1411 aa-4.21□□□□□ -3.08
RNU6-1340P-201ENST00000384438 A0A087WUJ7 227 aa-4.21□□□□□ -3.08
RNU6-1340P-201ENST00000384438 ARL5CA6NH57 179 aa-4.21□□□□□ -3.08
RNU6-1340P-201ENST00000384438 ARPC3O15145 178 aa-4.21□□□□□ -3.08
RNU6-1340P-201ENST00000384438 SERPINA1P01009 418 aa-4.21□□□□□ -3.08
RNU6-1340P-201ENST00000384438 CCL18P55774 89 aa-4.21□□□□□ -3.08
RNU6-1340P-201ENST00000384438 VMA21Q3ZAQ7 101 aa-4.21□□□□□ -3.08
RNU6-1340P-201ENST00000384438 TMEM170BQ5T4T1 132 aa-4.21□□□□□ -3.08
RNU6-1340P-201ENST00000384438 TRAPPC6BQ86SZ2 158 aa-4.21□□□□□ -3.08
RNU6-1340P-201ENST00000384438 ANKRD29Q8N6D5 301 aa-4.21□□□□□ -3.08
RNU6-1340P-201ENST00000384438 OR8J3Q8NGG0 315 aa-4.21□□□□□ -3.08
RNU6-1340P-201ENST00000384438 CA5BP1Q8WTZ4 195 aa-4.21□□□□□ -3.08
RNU6-1340P-201ENST00000384438 CIB3Q96Q77 187 aaPredicted RBP-4.21□□□□□ -3.08
RNU6-1340P-201ENST00000384438 TTTY10Q9BZA0 68 aa-4.21□□□□□ -3.08
RNU6-1340P-201ENST00000384438 NAA50Q9GZZ1 169 aaKnown RBP-4.21□□□□□ -3.08
RNU6-1340P-201ENST00000384438 EXTL2Q9UBQ6 330 aa-4.21□□□□□ -3.08
RNU6-1340P-201ENST00000384438 SMPXQ9UHP9 88 aa-4.21□□□□□ -3.08
RNU6-1340P-201ENST00000384438 VPS28Q9UK41 221 aa-4.21□□□□□ -3.08
RNU6-1340P-201ENST00000384438 UFC1Q9Y3C8 167 aa-4.21□□□□□ -3.08
RNU6-1340P-201ENST00000384438 UBR1Q8IWV7 1749 aa-4.21□□□□□ -3.08
RNU6-1340P-201ENST00000384438 A0A0J9YY10 115 aa-4.22□□□□□ -3.08
RNU6-1340P-201ENST00000384438 A0A1B0GX78 115 aa-4.22□□□□□ -3.08
RNU6-1340P-201ENST00000384438 SMCO2A6NFE2 343 aa-4.22□□□□□ -3.08
RNU6-1340P-201ENST00000384438 AIPO00170 330 aa-4.22□□□□□ -3.08
RNU6-1340P-201ENST00000384438 CYTH3O43739 400 aa-4.22□□□□□ -3.08
RNU6-1340P-201ENST00000384438 NIPSNAP2O75323 286 aa-4.22□□□□□ -3.08
RNU6-1340P-201ENST00000384438 LYPLA2O95372 231 aa-4.22□□□□□ -3.08
RNU6-1340P-201ENST00000384438 MFAP1P55081 439 aaKnown RBP-4.22□□□□□ -3.08
RNU6-1340P-201ENST00000384438 NME5P56597 212 aa-4.22□□□□□ -3.08
RNU6-1340P-201ENST00000384438 DAD1P61803 113 aa-4.22□□□□□ -3.08
RNU6-1340P-201ENST00000384438 CCSMST1Q4G0I0 132 aa-4.22□□□□□ -3.08
RNU6-1340P-201ENST00000384438 GOLT1AQ6ZVE7 132 aa-4.22□□□□□ -3.08
RNU6-1340P-201ENST00000384438 RUFY3Q7L099 469 aa-4.22□□□□□ -3.08
RNU6-1340P-201ENST00000384438 EIF3MQ7L2H7 374 aaKnown RBP-4.22□□□□□ -3.08
RNU6-1340P-201ENST00000384438 OR52E5Q8NH55 327 aa-4.22□□□□□ -3.08
RNU6-1340P-201ENST00000384438 CHCHD1Q96BP2 118 aaKnown RBP-4.22□□□□□ -3.08
RNU6-1340P-201ENST00000384438 ROPN1LQ96C74 230 aa-4.22□□□□□ -3.08
RNU6-1340P-201ENST00000384438 TMEM109Q9BVC6 243 aa-4.22□□□□□ -3.08
RNU6-1340P-201ENST00000384438 HDHD2Q9H0R4 259 aa-4.22□□□□□ -3.08
RNU6-1340P-201ENST00000384438 TMEM133Q9H2Q1 129 aa-4.22□□□□□ -3.08
RNU6-1340P-201ENST00000384438 RGCCQ9H4X1 137 aa-4.22□□□□□ -3.08
RNU6-1340P-201ENST00000384438 TAS2R3Q9NYW6 316 aa-4.22□□□□□ -3.08
RNU6-1340P-201ENST00000384438 HMG20BQ9P0W2 317 aa-4.22□□□□□ -3.08
RNU6-1340P-201ENST00000384438 AP1M2Q9Y6Q5 423 aa-4.22□□□□□ -3.08
RNU6-1340P-201ENST00000384438 LRRC37AA6NMS7 1700 aa-4.22□□□□□ -3.09
RNU6-1340P-201ENST00000384438 UTRNP46939 3433 aa-4.22□□□□□ -3.09
RNU6-1340P-201ENST00000384438 PTPRGP23470 1445 aa-4.22□□□□□ -3.09
RNU6-1340P-201ENST00000384438 TRAPPC8Q9Y2L5 1435 aa-4.22□□□□□ -3.09
RNU6-1340P-201ENST00000384438 TRAV5A0A0B4J249 113 aa-4.23□□□□□ -3.09
RNU6-1340P-201ENST00000384438 IGHV1-69-2A0A0G2JMI3 117 aa-4.23□□□□□ -3.09
RNU6-1340P-201ENST00000384438 TMEM210A6NLX4 147 aa-4.23□□□□□ -3.09
RNU6-1340P-201ENST00000384438 ZNF593O00488 134 aaPredicted RBP-4.23□□□□□ -3.09
RNU6-1340P-201ENST00000384438 COPEO14579 308 aa-4.23□□□□□ -3.09
RNU6-1340P-201ENST00000384438 HUS1O60921 280 aa-4.23□□□□□ -3.09
RNU6-1340P-201ENST00000384438 NDUFA3O95167 84 aa-4.23□□□□□ -3.09
RNU6-1340P-201ENST00000384438 CRYZL1O95825 349 aa-4.23□□□□□ -3.09
RNU6-1340P-201ENST00000384438 HBZP02008 142 aa-4.23□□□□□ -3.09
RNU6-1340P-201ENST00000384438 SMIM6P0DI80 62 aa-4.23□□□□□ -3.09
RNU6-1340P-201ENST00000384438 SRP14P37108 136 aaKnown RBP-4.23□□□□□ -3.09
RNU6-1340P-201ENST00000384438 YBEYP58557 167 aaPredicted RBP-4.23□□□□□ -3.09
RNU6-1340P-201ENST00000384438 YPEL3P61236 119 aaPredicted RBP-4.23□□□□□ -3.09
RNU6-1340P-201ENST00000384438 FABP5Q01469 135 aa-4.23□□□□□ -3.09
RNU6-1340P-201ENST00000384438 COX17Q14061 63 aa-4.23□□□□□ -3.09
RNU6-1340P-201ENST00000384438 COQ5Q5HYK3 327 aa-4.23□□□□□ -3.09
RNU6-1340P-201ENST00000384438 PIP5KL1Q5T9C9 394 aa-4.23□□□□□ -3.09
RNU6-1340P-201ENST00000384438 EIF5AL1Q6IS14 154 aaKnown RBP-4.23□□□□□ -3.09
RNU6-1340P-201ENST00000384438 SYS1Q8N2H4 156 aa-4.23□□□□□ -3.09
RNU6-1340P-201ENST00000384438 PHB2Q99623 299 aa-4.23□□□□□ -3.09
RNU6-1340P-201ENST00000384438 VPS29Q9UBQ0 182 aa-4.23□□□□□ -3.09
RNU6-1340P-201ENST00000384438 ERG28Q9UKR5 140 aa-4.23□□□□□ -3.09
RNU6-1340P-201ENST00000384438 TIMM8BQ9Y5J9 83 aaPredicted RBP-4.23□□□□□ -3.09
RNU6-1340P-201ENST00000384438 NCAPD2Q15021 1401 aa-4.23□□□□□ -3.09
RNU6-1340P-201ENST00000384438 KIF21AQ7Z4S6 1674 aa-4.23□□□□□ -3.09
RNU6-1340P-201ENST00000384438 DOCK2Q92608 1830 aa-4.23□□□□□ -3.09
RNU6-1340P-201ENST00000384438 CRYBG1Q9Y4K1 1723 aa-4.24□□□□□ -3.09
RNU6-1340P-201ENST00000384438 C3orf85A0A1B0GTC6 90 aa-4.24□□□□□ -3.09
RNU6-1340P-201ENST00000384438 NDUFB3O43676 98 aa-4.24□□□□□ -3.09
RNU6-1340P-201ENST00000384438 TSPAN12O95859 305 aa-4.24□□□□□ -3.09
RNU6-1340P-201ENST00000384438 PIRTP0C851 137 aa-4.24□□□□□ -3.09
RNU6-1340P-201ENST00000384438 DEFB130BP0DP73 79 aa-4.24□□□□□ -3.09
Retrieved 100 of 20,778 RNA–protein pairs in 91.8 ms