RNA–Protein interactions for RNA: ENST00000381140.8

GTF3A-201, Transcript of general transcription factor IIIA, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GTF3A, Length 1,383 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-201ENST00000381140 CDKN1BP46527 198 aa14.01□□□□□ -0.17
GTF3A-201ENST00000381140 CMTM2Q8TAZ6 248 aa14.01□□□□□ -0.17
GTF3A-201ENST00000381140 ATG101Q9BSB4 218 aa14.01□□□□□ -0.17
GTF3A-201ENST00000381140 TSPOP30536 169 aa14□□□□□ -0.17
GTF3A-201ENST00000381140 EMP1P54849 157 aa14□□□□□ -0.17
GTF3A-201ENST00000381140 VGLL1Q99990 258 aa14□□□□□ -0.17
GTF3A-201ENST00000381140 SMIM7Q9BQ49 75 aa14□□□□□ -0.17
GTF3A-201ENST00000381140 CXorf65A6NEN9 183 aa13.99□□□□□ -0.17
GTF3A-201ENST00000381140 ZNF727A8MUV8 499 aa13.99□□□□□ -0.17
GTF3A-201ENST00000381140 TCRAP04437 139 aa13.99□□□□□ -0.17
GTF3A-201ENST00000381140 LEPP41159 167 aa13.99□□□□□ -0.17
GTF3A-201ENST00000381140 AKR1C3P42330 323 aa13.99□□□□□ -0.17
GTF3A-201ENST00000381140 GNG5P63218 68 aa13.99□□□□□ -0.17
GTF3A-201ENST00000381140 KIR3DS1Q14943 382 aa13.99□□□□□ -0.17
GTF3A-201ENST00000381140 CASC10Q5T4H9 136 aa13.99□□□□□ -0.17
GTF3A-201ENST00000381140 NIPSNAP3BQ9BS92 247 aa13.99□□□□□ -0.17
GTF3A-201ENST00000381140 AGPAT4-IT1Q9H0P7 198 aa13.99□□□□□ -0.17
GTF3A-201ENST00000381140 SERTM2A0A1B0GWG4 89 aa13.98□□□□□ -0.17
GTF3A-201ENST00000381140 APOC3P02656 99 aa13.98□□□□□ -0.17
GTF3A-201ENST00000381140 ZNF674Q2M3X9 581 aa13.98□□□□□ -0.17
GTF3A-201ENST00000381140 TMEM78Q5T7P6 136 aa13.98□□□□□ -0.17
GTF3A-201ENST00000381140 C11orf45Q8TAV5 145 aa13.98□□□□□ -0.17
GTF3A-201ENST00000381140 LINC00477Q96M19 166 aa13.98□□□□□ -0.17
GTF3A-201ENST00000381140 DERL1Q9BUN8 251 aa13.98□□□□□ -0.17
GTF3A-201ENST00000381140 SMIM9A6NGZ8 99 aa13.97□□□□□ -0.17
GTF3A-201ENST00000381140 ZNF705GA8MUZ8 300 aaPredicted RBP13.97□□□□□ -0.17
GTF3A-201ENST00000381140 PRM2P04554 102 aa13.97□□□□□ -0.17
GTF3A-201ENST00000381140 RPL35P42766 123 aaKnown RBP13.97□□□□□ -0.17
GTF3A-201ENST00000381140 NANOS2P60321 138 aaKnown RBP13.97□□□□□ -0.17
GTF3A-201ENST00000381140 C9orf47Q6ZRZ4 202 aa13.97□□□□□ -0.17
GTF3A-201ENST00000381140 SVBPQ8N300 66 aa13.97□□□□□ -0.17
GTF3A-201ENST00000381140 LINC01587Q99440 93 aa13.97□□□□□ -0.17
GTF3A-201ENST00000381140 NEU1Q99519 415 aa13.97□□□□□ -0.17
GTF3A-201ENST00000381140 KLF12Q9Y4X4 402 aa13.97□□□□□ -0.17
GTF3A-201ENST00000381140 DNAH7Q8WXX0 4024 aa13.97□□□□□ -0.17
GTF3A-201ENST00000381140 C9JCJ5 164 aa13.96□□□□□ -0.17
GTF3A-201ENST00000381140 DIRC3C9JPN6 131 aa13.96□□□□□ -0.17
GTF3A-201ENST00000381140 S100A9P06702 114 aaKnown RBP13.96□□□□□ -0.17
GTF3A-201ENST00000381140 HTN1P15515 57 aa13.96□□□□□ -0.17
GTF3A-201ENST00000381140 TAS2R60P59551 318 aa13.96□□□□□ -0.17
GTF3A-201ENST00000381140 RRN3P1Q2M238 152 aa13.96□□□□□ -0.17
GTF3A-201ENST00000381140 GFI1BQ5VTD9 330 aa13.96□□□□□ -0.17
GTF3A-201ENST00000381140 Q8TAT8 98 aa13.96□□□□□ -0.17
GTF3A-201ENST00000381140 ODF3Q96PU9 254 aa13.96□□□□□ -0.17
GTF3A-201ENST00000381140 NAT8Q9UHE5 227 aa13.96□□□□□ -0.17
GTF3A-201ENST00000381140 TRAV12-3A0A0B4J271 114 aa13.96□□□□□ -0.18
GTF3A-201ENST00000381140 PNRC1Q12796 327 aaPredicted RBP13.96□□□□□ -0.18
GTF3A-201ENST00000381140 TMEM183BQ1AE95 376 aa13.96□□□□□ -0.18
GTF3A-201ENST00000381140 TRBV20OR9-2A0A075B6H5 130 aa13.95□□□□□ -0.18
GTF3A-201ENST00000381140 TRBV6-1A0A0K0K1D8 114 aa13.95□□□□□ -0.18
GTF3A-201ENST00000381140 K7EQM0 130 aa13.95□□□□□ -0.18
GTF3A-201ENST00000381140 ZNF138P52744 262 aa13.95□□□□□ -0.18
GTF3A-201ENST00000381140 TMEM241Q24JQ0 296 aa13.95□□□□□ -0.18
GTF3A-201ENST00000381140 GOLT1AQ6ZVE7 132 aa13.95□□□□□ -0.18
GTF3A-201ENST00000381140 TMEM75Q8N9X5 138 aa13.95□□□□□ -0.18
GTF3A-201ENST00000381140 TVP23CQ96ET8 276 aa13.95□□□□□ -0.18
GTF3A-201ENST00000381140 FMC1Q96HJ9 113 aa13.95□□□□□ -0.18
GTF3A-201ENST00000381140 SDF2L1Q9HCN8 221 aa13.95□□□□□ -0.18
GTF3A-201ENST00000381140 CELA1Q9UNI1 258 aa13.95□□□□□ -0.18
GTF3A-201ENST00000381140 LY96Q9Y6Y9 160 aa13.95□□□□□ -0.18
GTF3A-201ENST00000381140 SNAPINO95295 136 aa13.94□□□□□ -0.18
GTF3A-201ENST00000381140 RNASE4P34096 147 aaKnown RBP13.94□□□□□ -0.18
GTF3A-201ENST00000381140 TMEM256Q8N2U0 113 aa13.94□□□□□ -0.18
GTF3A-201ENST00000381140 ZNF492Q9P255 531 aa13.94□□□□□ -0.18
GTF3A-201ENST00000381140 RBAKDNA6NC62 111 aa13.93□□□□□ -0.18
GTF3A-201ENST00000381140 FBLL1A6NHQ2 334 aaKnown RBP13.93□□□□□ -0.18
GTF3A-201ENST00000381140 GPX1P07203 203 aa13.93□□□□□ -0.18
GTF3A-201ENST00000381140 UBE2G1P62253 170 aa13.93□□□□□ -0.18
GTF3A-201ENST00000381140 BTN1A1Q13410 526 aa13.93□□□□□ -0.18
GTF3A-201ENST00000381140 CENPWQ5EE01 88 aa13.93□□□□□ -0.18
GTF3A-201ENST00000381140 CLRN3Q8NCR9 226 aa13.93□□□□□ -0.18
GTF3A-201ENST00000381140 LINC00479Q96M42 142 aa13.93□□□□□ -0.18
GTF3A-201ENST00000381140 C7orf71A4D174 169 aa13.92□□□□□ -0.18
GTF3A-201ENST00000381140 TMEM189A5PLL7 270 aa13.92□□□□□ -0.18
GTF3A-201ENST00000381140 IGLV2-11P01706 119 aa13.92□□□□□ -0.18
GTF3A-201ENST00000381140 GNG4P50150 75 aa13.92□□□□□ -0.18
GTF3A-201ENST00000381140 SMIM12Q96EX1 92 aa13.92□□□□□ -0.18
GTF3A-201ENST00000381140 FAM19A4Q96LR4 140 aa13.92□□□□□ -0.18
GTF3A-201ENST00000381140 TRAV34A0A0B4J273 112 aa13.91□□□□□ -0.18
GTF3A-201ENST00000381140 H7BYZ3 331 aa13.91□□□□□ -0.18
GTF3A-201ENST00000381140 AZU1P20160 251 aa13.91□□□□□ -0.18
GTF3A-201ENST00000381140 RPL23P62829 140 aaKnown RBP13.91□□□□□ -0.18
GTF3A-201ENST00000381140 Q86TA4 180 aa13.91□□□□□ -0.18
GTF3A-201ENST00000381140 LINC01551Q86U37 167 aa13.91□□□□□ -0.18
GTF3A-201ENST00000381140 PHLDA1Q8WV24 401 aaPredicted RBP13.91□□□□□ -0.18
GTF3A-201ENST00000381140 SGK494Q96LW2 274 aa13.91□□□□□ -0.18
GTF3A-201ENST00000381140 C20orf144Q9BQM9 153 aa13.91□□□□□ -0.18
GTF3A-201ENST00000381140 TRAV8-1A0A0A6YYK1 113 aa13.9□□□□□ -0.18
GTF3A-201ENST00000381140 LTAP01374 205 aa13.9□□□□□ -0.18
GTF3A-201ENST00000381140 CRISP2P16562 243 aa13.9□□□□□ -0.18
GTF3A-201ENST00000381140 PRR9Q5T870 116 aa13.9□□□□□ -0.18
GTF3A-201ENST00000381140 ZFAND2AQ8N6M9 145 aa13.9□□□□□ -0.18
GTF3A-201ENST00000381140 KLLNB2CW77 178 aa13.89□□□□□ -0.19
GTF3A-201ENST00000381140 M0R036 132 aa13.89□□□□□ -0.19
GTF3A-201ENST00000381140 SPART-AS1P0CW21 52 aa13.89□□□□□ -0.19
GTF3A-201ENST00000381140 FLI1Q01543 452 aaPredicted RBP13.89□□□□□ -0.19
GTF3A-201ENST00000381140 RHEBQ15382 184 aa13.89□□□□□ -0.19
GTF3A-201ENST00000381140 FAM222AQ5U5X8 452 aa13.89□□□□□ -0.19
GTF3A-201ENST00000381140 BAGE2Q86Y30 109 aa13.89□□□□□ -0.19
GTF3A-201ENST00000381140 PSG8Q9UQ74 426 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms