RNA–Protein interactions for RNA: ENST00000380815.4

GMDS-202, Transcript of GDP-mannose 4,6-dehydratase, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene GMDS, Length 1,752 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GMDS-202ENST00000380815 ADAMTSL5Q6ZMM2 481 aa16.17■□□□□ 0.18
GMDS-202ENST00000380815 CUBNO60494 3623 aa16.16■□□□□ 0.18
GMDS-202ENST00000380815 CRISP2P16562 243 aa16.16■□□□□ 0.18
GMDS-202ENST00000380815 SLAQ13239 276 aa16.16■□□□□ 0.18
GMDS-202ENST00000380815 LINC01559Q495D7 138 aa16.16■□□□□ 0.18
GMDS-202ENST00000380815 WFDC3Q8IUB2 231 aa16.16■□□□□ 0.18
GMDS-202ENST00000380815 OR9G4Q8NGQ1 327 aa16.16■□□□□ 0.18
GMDS-202ENST00000380815 TMSB15BA0A087X1C1 80 aa16.15■□□□□ 0.18
GMDS-202ENST00000380815 TRBV7-9A0A0J9YWB2 115 aa16.15■□□□□ 0.18
GMDS-202ENST00000380815 K7EQG2 157 aa16.15■□□□□ 0.18
GMDS-202ENST00000380815 CD28P10747 220 aa16.15■□□□□ 0.18
GMDS-202ENST00000380815 A0A1B0GW15 77 aa16.15■□□□□ 0.18
GMDS-202ENST00000380815 ORM1P02763 201 aa16.15■□□□□ 0.18
GMDS-202ENST00000380815 S100A2P29034 98 aa16.15■□□□□ 0.18
GMDS-202ENST00000380815 RIGQ13278 110 aa16.15■□□□□ 0.18
GMDS-202ENST00000380815 PDZD11Q5EBL8 140 aa16.15■□□□□ 0.18
GMDS-202ENST00000380815 DUX3Q96PT4 197 aa16.15■□□□□ 0.18
GMDS-202ENST00000380815 GRIFINA4D1Z8 144 aa16.14■□□□□ 0.17
GMDS-202ENST00000380815 DEFB1P60022 68 aa16.14■□□□□ 0.17
GMDS-202ENST00000380815 SNRPD3P62318 126 aaKnown RBP16.14■□□□□ 0.17
GMDS-202ENST00000380815 ZNF575Q86XF7 245 aa16.14■□□□□ 0.17
GMDS-202ENST00000380815 DLX4Q92988 240 aaPredicted RBP16.14■□□□□ 0.17
GMDS-202ENST00000380815 FAM19A4Q96LR4 140 aa16.14■□□□□ 0.17
GMDS-202ENST00000380815 F6UB75 175 aa16.13■□□□□ 0.17
GMDS-202ENST00000380815 ARMS2P0C7Q2 107 aa16.13■□□□□ 0.17
GMDS-202ENST00000380815 Q0VG73 95 aa16.13■□□□□ 0.17
GMDS-202ENST00000380815 KIAA1644Q3SXP7 199 aa16.13■□□□□ 0.17
GMDS-202ENST00000380815 BORCS7Q96B45 105 aa16.13■□□□□ 0.17
GMDS-202ENST00000380815 TSSC4Q9Y5U2 329 aaPredicted RBP16.13■□□□□ 0.17
GMDS-202ENST00000380815 TFPI2P48307 235 aa16.13■□□□□ 0.17
GMDS-202ENST00000380815 PAFAH1B2P68402 229 aa16.13■□□□□ 0.17
GMDS-202ENST00000380815 FHL3Q13643 280 aa16.13■□□□□ 0.17
GMDS-202ENST00000380815 LINC00518Q8N0U6 118 aa16.13■□□□□ 0.17
GMDS-202ENST00000380815 ZFAND2AQ8N6M9 145 aa16.13■□□□□ 0.17
GMDS-202ENST00000380815 C11orf44Q8N8P7 122 aa16.13■□□□□ 0.17
GMDS-202ENST00000380815 RAX2Q96IS3 184 aa16.13■□□□□ 0.17
GMDS-202ENST00000380815 TPPP3Q9BW30 176 aa16.13■□□□□ 0.17
GMDS-202ENST00000380815 SSBP4Q9BWG4 385 aaPredicted RBP16.13■□□□□ 0.17
GMDS-202ENST00000380815 IGLC6P0CF74 106 aa16.12■□□□□ 0.17
GMDS-202ENST00000380815 HIST2H2BDQ6DRA6 164 aa16.12■□□□□ 0.17
GMDS-202ENST00000380815 LYZL1Q6UWQ5 148 aa16.12■□□□□ 0.17
GMDS-202ENST00000380815 CITED2Q99967 270 aaPredicted RBP16.12■□□□□ 0.17
GMDS-202ENST00000380815 INAFM1C9JVW0 142 aa16.11■□□□□ 0.17
GMDS-202ENST00000380815 CTRLP40313 264 aa16.11■□□□□ 0.17
GMDS-202ENST00000380815 GATD1Q8NB37 220 aa16.11■□□□□ 0.17
GMDS-202ENST00000380815 HIST1H2BLQ99880 126 aa16.11■□□□□ 0.17
GMDS-202ENST00000380815 IGKV3D-20A0A0C4DH25 116 aa16.1■□□□□ 0.17
GMDS-202ENST00000380815 CSN3P07498 182 aa16.1■□□□□ 0.17
GMDS-202ENST00000380815 ZNF688P0C7X2 276 aa16.1■□□□□ 0.17
GMDS-202ENST00000380815 SRIP30626 198 aa16.1■□□□□ 0.17
GMDS-202ENST00000380815 OR10J3Q5JRS4 329 aa16.1■□□□□ 0.17
GMDS-202ENST00000380815 PSMG4Q5JS54 123 aa16.1■□□□□ 0.17
GMDS-202ENST00000380815 PRR9Q5T870 116 aa16.1■□□□□ 0.17
GMDS-202ENST00000380815 APRG1Q8IVJ8 170 aa16.1■□□□□ 0.17
GMDS-202ENST00000380815 FER1L6-AS1Q8NA97 138 aa16.1■□□□□ 0.17
GMDS-202ENST00000380815 RNF114Q9Y508 228 aa16.1■□□□□ 0.17
GMDS-202ENST00000380815 C11orf21Q9P2W6 132 aa16.1■□□□□ 0.17
GMDS-202ENST00000380815 TP53TG3Q9ULZ0 132 aa16.1■□□□□ 0.17
GMDS-202ENST00000380815 A0A1B0GUS0 222 aa16.09■□□□□ 0.17
GMDS-202ENST00000380815 CCL24O00175 119 aa16.09■□□□□ 0.17
GMDS-202ENST00000380815 FABP4P15090 132 aa16.09■□□□□ 0.17
GMDS-202ENST00000380815 TMEM256Q8N2U0 113 aa16.09■□□□□ 0.17
GMDS-202ENST00000380815 TRAV2A0A0B4J234 112 aa16.08■□□□□ 0.17
GMDS-202ENST00000380815 A0A1W2PRX2 142 aa16.08■□□□□ 0.17
GMDS-202ENST00000380815 PROK1P58294 105 aa16.08■□□□□ 0.17
GMDS-202ENST00000380815 BAGE3Q86Y29 109 aa16.08■□□□□ 0.17
GMDS-202ENST00000380815 GPX1P07203 203 aa16.08■□□□□ 0.16
GMDS-202ENST00000380815 SMIM6P0DI80 62 aa16.08■□□□□ 0.16
GMDS-202ENST00000380815 CNFNQ9BYD5 112 aa16.08■□□□□ 0.16
GMDS-202ENST00000380815 TRAV21A0A0B4J279 112 aa16.07■□□□□ 0.16
GMDS-202ENST00000380815 TCF21O43680 179 aa16.07■□□□□ 0.16
GMDS-202ENST00000380815 AMBPP02760 352 aa16.07■□□□□ 0.16
GMDS-202ENST00000380815 ESDP10768 282 aa16.07■□□□□ 0.16
GMDS-202ENST00000380815 ZNF493Q6ZR52 646 aa16.07■□□□□ 0.16
GMDS-202ENST00000380815 ALKBH7Q9BT30 221 aaPredicted RBP16.07■□□□□ 0.16
GMDS-202ENST00000380815 A0A0J9YX75 114 aa16.06■□□□□ 0.16
GMDS-202ENST00000380815 F2Z2F3 143 aa16.06■□□□□ 0.16
GMDS-202ENST00000380815 OR10D4PQ8NGN7 298 aa16.06■□□□□ 0.16
GMDS-202ENST00000380815 PACRGQ96M98 296 aaPredicted RBP16.06■□□□□ 0.16
GMDS-202ENST00000380815 ODF3Q96PU9 254 aa16.06■□□□□ 0.16
GMDS-202ENST00000380815 NUPR1O60356 82 aa16.05■□□□□ 0.16
GMDS-202ENST00000380815 LINC00310P59036 64 aa16.05■□□□□ 0.16
GMDS-202ENST00000380815 DYNLRB2Q8TF09 96 aa16.05■□□□□ 0.16
GMDS-202ENST00000380815 TMEM18Q96B42 140 aa16.05■□□□□ 0.16
GMDS-202ENST00000380815 NSD1Q96L73 2696 aaPredicted RBP16.05■□□□□ 0.16
GMDS-202ENST00000380815 LOC102724200A0A096LPH7 203 aaPredicted RBP16.05■□□□□ 0.16
GMDS-202ENST00000380815 KLLNB2CW77 178 aa16.05■□□□□ 0.16
GMDS-202ENST00000380815 SERF1AO75920 110 aa16.05■□□□□ 0.16
GMDS-202ENST00000380815 DEFB114Q30KQ6 69 aa16.05■□□□□ 0.16
GMDS-202ENST00000380815 EBLN2Q6P2I7 272 aa16.05■□□□□ 0.16
GMDS-202ENST00000380815 Q6ZQT7 251 aa16.05■□□□□ 0.16
GMDS-202ENST00000380815 TMEM61Q8N0U2 210 aa16.05■□□□□ 0.16
GMDS-202ENST00000380815 C18orf32Q8TCD1 76 aa16.05■□□□□ 0.16
GMDS-202ENST00000380815 HIVEP1P15822 2718 aa16.04■□□□□ 0.16
GMDS-202ENST00000380815 J3KRW8 73 aa16.04■□□□□ 0.16
GMDS-202ENST00000380815 C12orf57Q99622 126 aa16.04■□□□□ 0.16
GMDS-202ENST00000380815 SETD2Q9BYW2 2564 aaPredicted RBP16.04■□□□□ 0.16
GMDS-202ENST00000380815 CD33P20138 364 aa16.03■□□□□ 0.16
GMDS-202ENST00000380815 RNASE4P34096 147 aaKnown RBP16.03■□□□□ 0.16
GMDS-202ENST00000380815 PRR31Q5SQ13 230 aa16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 82.3 ms