RNA–Protein interactions for RNA: ENST00000380285.7

SNX1-202, Transcript of sorting nexin 1, humanhuman

TSL 1 (best)

Gene SNX1, Length 8,119 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-202ENST00000380285 LYNX1G3V0Z9 82 aa7.67□□□□□ -1.18
SNX1-202ENST00000380285 LYNX1P0DP58 116 aa7.67□□□□□ -1.18
SNX1-202ENST00000380285 PRSS57Q6UWY2 283 aa7.67□□□□□ -1.18
SNX1-202ENST00000380285 ZNF747Q9BV97 191 aa7.67□□□□□ -1.18
SNX1-202ENST00000380285 PCNX1Q96RV3 2341 aa7.66□□□□□ -1.18
SNX1-202ENST00000380285 H3BUX3 64 aa7.66□□□□□ -1.18
SNX1-202ENST00000380285 DSCR8Q96T75 97 aa7.66□□□□□ -1.18
SNX1-202ENST00000380285 IGHV1OR15-1A0A075B7D0 117 aa7.66□□□□□ -1.18
SNX1-202ENST00000380285 C15orf65H3BRN8 121 aa7.66□□□□□ -1.18
SNX1-202ENST00000380285 CD59P13987 128 aa7.66□□□□□ -1.18
SNX1-202ENST00000380285 C8orf86Q6ZUL3 223 aa7.66□□□□□ -1.18
SNX1-202ENST00000380285 VOPP1Q96AW1 172 aa7.66□□□□□ -1.18
SNX1-202ENST00000380285 H3BUA1 57 aa7.66□□□□□ -1.18
SNX1-202ENST00000380285 IGHV3-73A0A0B4J1V6 119 aa7.66□□□□□ -1.18
SNX1-202ENST00000380285 A0A0G2JNJ9 132 aa7.66□□□□□ -1.18
SNX1-202ENST00000380285 A0A1W2PRX2 142 aa7.66□□□□□ -1.18
SNX1-202ENST00000380285 C17orf58Q2M2W7 97 aa7.66□□□□□ -1.18
SNX1-202ENST00000380285 Q9UFV3 132 aa7.66□□□□□ -1.18
SNX1-202ENST00000380285 INS-IGF2F8WCM5 200 aa7.66□□□□□ -1.18
SNX1-202ENST00000380285 KLRD1Q13241 179 aa7.66□□□□□ -1.18
SNX1-202ENST00000380285 ZC2HC1AQ96GY0 325 aa7.66□□□□□ -1.18
SNX1-202ENST00000380285 MCRIP2Q9BUT9 160 aaKnown RBP7.66□□□□□ -1.18
SNX1-202ENST00000380285 SAP30O75446 220 aa7.65□□□□□ -1.18
SNX1-202ENST00000380285 Q6ZS92 163 aa7.65□□□□□ -1.18
SNX1-202ENST00000380285 HIGD1BQ9P298 99 aa7.65□□□□□ -1.18
SNX1-202ENST00000380285 THSD7BQ9C0I4 1608 aa7.65□□□□□ -1.18
SNX1-202ENST00000380285 ZNF134P52741 427 aa7.65□□□□□ -1.18
SNX1-202ENST00000380285 C1orf122Q6ZSJ8 110 aa7.65□□□□□ -1.18
SNX1-202ENST00000380285 CARD19Q96LW7 228 aa7.65□□□□□ -1.18
SNX1-202ENST00000380285 PRDM6Q9NQX0 595 aa7.65□□□□□ -1.18
SNX1-202ENST00000380285 H3BMG7 143 aa7.65□□□□□ -1.18
SNX1-202ENST00000380285 SAA4P35542 130 aa7.65□□□□□ -1.18
SNX1-202ENST00000380285 TMEM219Q86XT9 240 aa7.65□□□□□ -1.18
SNX1-202ENST00000380285 TMEM126AQ9H061 195 aa7.65□□□□□ -1.18
SNX1-202ENST00000380285 HERV-K104P63124 156 aa7.65□□□□□ -1.19
SNX1-202ENST00000380285 MLANAQ16655 118 aa7.65□□□□□ -1.19
SNX1-202ENST00000380285 TMEM243Q9BU79 118 aa7.65□□□□□ -1.19
SNX1-202ENST00000380285 PRB3Q04118 309 aaPredicted RBP7.65□□□□□ -1.19
SNX1-202ENST00000380285 CACNA1BQ00975 2339 aa7.64□□□□□ -1.19
SNX1-202ENST00000380285 KAAG1Q9UBP8 84 aa7.64□□□□□ -1.19
SNX1-202ENST00000380285 IGLC1P0CG04 106 aa7.64□□□□□ -1.19
SNX1-202ENST00000380285 LINC01356Q8N9X3 169 aa7.64□□□□□ -1.19
SNX1-202ENST00000380285 K7EN84 100 aa7.63□□□□□ -1.19
SNX1-202ENST00000380285 CFC1BP0CG36 223 aa7.63□□□□□ -1.19
SNX1-202ENST00000380285 CFC1P0CG37 223 aa7.63□□□□□ -1.19
SNX1-202ENST00000380285 LINC00205P59089 165 aa7.63□□□□□ -1.19
SNX1-202ENST00000380285 RNF114Q9Y508 228 aa7.63□□□□□ -1.19
SNX1-202ENST00000380285 IGLV1-44P01699 117 aa7.63□□□□□ -1.19
SNX1-202ENST00000380285 WT1-ASQ06250 92 aa7.63□□□□□ -1.19
SNX1-202ENST00000380285 LYPD2Q6UXB3 125 aa7.63□□□□□ -1.19
SNX1-202ENST00000380285 FOXI2Q6ZQN5 318 aa7.63□□□□□ -1.19
SNX1-202ENST00000380285 C5orf24Q7Z6I8 188 aa7.63□□□□□ -1.19
SNX1-202ENST00000380285 ALPK3Q96L96 1907 aa7.63□□□□□ -1.19
SNX1-202ENST00000380285 UBE2DNLQ8IWF7 75 aa7.63□□□□□ -1.19
SNX1-202ENST00000380285 RNF152Q8N8N0 203 aa7.63□□□□□ -1.19
SNX1-202ENST00000380285 WFDC12Q8WWY7 111 aa7.63□□□□□ -1.19
SNX1-202ENST00000380285 ATP6V0E1O15342 81 aa7.62□□□□□ -1.19
SNX1-202ENST00000380285 SCRT2Q9NQ03 307 aa7.62□□□□□ -1.19
SNX1-202ENST00000380285 OVOL3O00110 214 aa7.62□□□□□ -1.19
SNX1-202ENST00000380285 Q6ZSR3 168 aa7.62□□□□□ -1.19
SNX1-202ENST00000380285 C15orf53Q8NAA6 179 aa7.62□□□□□ -1.19
SNX1-202ENST00000380285 ZNF625Q96I27 306 aaPredicted RBP7.62□□□□□ -1.19
SNX1-202ENST00000380285 ZNF106Q9H2Y7 1883 aaKnown RBP7.62□□□□□ -1.19
SNX1-202ENST00000380285 DKK1O94907 266 aa7.62□□□□□ -1.19
SNX1-202ENST00000380285 MORN5Q5VZ52 161 aa7.62□□□□□ -1.19
SNX1-202ENST00000380285 TMEM105Q8N8V8 129 aa7.62□□□□□ -1.19
SNX1-202ENST00000380285 ATP6V0E2Q8NHE4 81 aa7.62□□□□□ -1.19
SNX1-202ENST00000380285 LINC00527Q9UJ94 153 aa7.62□□□□□ -1.19
SNX1-202ENST00000380285 ARTNQ5T4W7 220 aa7.61□□□□□ -1.19
SNX1-202ENST00000380285 KLHL30-AS1Q8NEE0 82 aa7.61□□□□□ -1.19
SNX1-202ENST00000380285 USF3Q68DE3 2245 aa7.61□□□□□ -1.19
SNX1-202ENST00000380285 IGLV3-9A0A075B6K5 115 aa7.61□□□□□ -1.19
SNX1-202ENST00000380285 ATOX1O00244 68 aa7.61□□□□□ -1.19
SNX1-202ENST00000380285 NDUFC2O95298 119 aa7.61□□□□□ -1.19
SNX1-202ENST00000380285 ZNF561-AS1K7EIQ3 104 aa7.61□□□□□ -1.19
SNX1-202ENST00000380285 SELENOKQ9Y6D0 94 aa7.61□□□□□ -1.19
SNX1-202ENST00000380285 V9GYY9 64 aa7.61□□□□□ -1.19
SNX1-202ENST00000380285 E7EQL1 145 aa7.61□□□□□ -1.19
SNX1-202ENST00000380285 LCNL1Q6ZST4 164 aa7.61□□□□□ -1.19
SNX1-202ENST00000380285 MSRB2Q9Y3D2 182 aa7.61□□□□□ -1.19
SNX1-202ENST00000380285 CCL25O15444 150 aa7.61□□□□□ -1.19
SNX1-202ENST00000380285 IGFL4Q6B9Z1 124 aa7.61□□□□□ -1.19
SNX1-202ENST00000380285 IGFL3Q6UXB1 125 aa7.61□□□□□ -1.19
SNX1-202ENST00000380285 PSCAO43653 123 aa7.6□□□□□ -1.19
SNX1-202ENST00000380285 ANXA2RQ3ZCQ2 193 aa7.6□□□□□ -1.19
SNX1-202ENST00000380285 TEN1Q86WV5 123 aa7.6□□□□□ -1.19
SNX1-202ENST00000380285 KIAA1549LQ6ZVL6 1849 aa7.6□□□□□ -1.19
SNX1-202ENST00000380285 ATP5G1P05496 136 aa7.6□□□□□ -1.19
SNX1-202ENST00000380285 WDR86Q86TI4 376 aa7.6□□□□□ -1.19
SNX1-202ENST00000380285 LINC01619G3V211 115 aa7.6□□□□□ -1.19
SNX1-202ENST00000380285 H0YGX0 51 aa7.6□□□□□ -1.19
SNX1-202ENST00000380285 TRAV12-1A0A0B4J245 112 aa7.6□□□□□ -1.19
SNX1-202ENST00000380285 J3QLI3 93 aa7.6□□□□□ -1.19
SNX1-202ENST00000380285 COL8A2P25067 703 aa7.6□□□□□ -1.19
SNX1-202ENST00000380285 DKK2Q9UBU2 259 aa7.6□□□□□ -1.19
SNX1-202ENST00000380285 KIF26AQ9ULI4 1882 aaPredicted RBP7.6□□□□□ -1.19
SNX1-202ENST00000380285 DEFB131AP59861 70 aa7.6□□□□□ -1.19
SNX1-202ENST00000380285 SMIM20Q8N5G0 67 aa7.6□□□□□ -1.19
SNX1-202ENST00000380285 IGFBPL1Q8WX77 278 aa7.6□□□□□ -1.19
SNX1-202ENST00000380285 ORMDL1Q9P0S3 153 aa7.6□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 76.6 ms