RNA–Protein interactions for RNA: ENST00000379446.9

NEDD9-202, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NEDD9, Length 4,536 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-202ENST00000379446 RPL36AP83881 106 aaKnown RBP5.15□□□□□ -1.58
NEDD9-202ENST00000379446 CD300EQ496F6 205 aaPredicted RBP5.15□□□□□ -1.58
NEDD9-202ENST00000379446 RPL36ALQ969Q0 106 aaKnown RBP5.15□□□□□ -1.58
NEDD9-202ENST00000379446 ARHGAP32A7KAX9 2087 aa5.15□□□□□ -1.58
NEDD9-202ENST00000379446 J3QR89 54 aa5.15□□□□□ -1.58
NEDD9-202ENST00000379446 LEPROTL1O95214 131 aa5.15□□□□□ -1.58
NEDD9-202ENST00000379446 IGKV1-16P04430 117 aa5.15□□□□□ -1.58
NEDD9-202ENST00000379446 VWC2Q2TAL6 325 aa5.15□□□□□ -1.58
NEDD9-202ENST00000379446 IBA57Q5T440 356 aaKnown RBP5.15□□□□□ -1.58
NEDD9-202ENST00000379446 IL36BQ9NZH7 164 aa5.15□□□□□ -1.58
NEDD9-202ENST00000379446 TRBV6-6A0A0A6YYG2 114 aa5.15□□□□□ -1.59
NEDD9-202ENST00000379446 C7orf71A4D174 169 aa5.15□□□□□ -1.59
NEDD9-202ENST00000379446 SPATA31B1PQ5VZV4 182 aa5.15□□□□□ -1.59
NEDD9-202ENST00000379446 SFTA2Q6UW10 78 aa5.15□□□□□ -1.59
NEDD9-202ENST00000379446 TEX43Q6ZNM6 134 aa5.15□□□□□ -1.59
NEDD9-202ENST00000379446 KIAA1549Q9HCM3 1950 aa5.15□□□□□ -1.59
NEDD9-202ENST00000379446 CXorf1O96002 111 aa5.15□□□□□ -1.59
NEDD9-202ENST00000379446 NBEAP1P0C6P0 100 aa5.15□□□□□ -1.59
NEDD9-202ENST00000379446 C8orf88P0DMB2 117 aa5.15□□□□□ -1.59
NEDD9-202ENST00000379446 DIAPH2-AS1Q14236 149 aa5.15□□□□□ -1.59
NEDD9-202ENST00000379446 PSG3Q16557 428 aa5.15□□□□□ -1.59
NEDD9-202ENST00000379446 IGFL4Q6B9Z1 124 aa5.15□□□□□ -1.59
NEDD9-202ENST00000379446 VPS13AQ96RL7 3174 aa5.14□□□□□ -1.59
NEDD9-202ENST00000379446 TEX48A0A1B0GUV7 120 aa5.14□□□□□ -1.59
NEDD9-202ENST00000379446 PPP1R17O96001 155 aa5.14□□□□□ -1.59
NEDD9-202ENST00000379446 GCSHP23434 173 aa5.14□□□□□ -1.59
NEDD9-202ENST00000379446 C2orf83Q53S99 150 aa5.14□□□□□ -1.59
NEDD9-202ENST00000379446 CLUHP3Q96NS8 147 aa5.14□□□□□ -1.59
NEDD9-202ENST00000379446 KLK15Q9H2R5 256 aa5.14□□□□□ -1.59
NEDD9-202ENST00000379446 CFAP54Q96N23 3096 aa5.14□□□□□ -1.59
NEDD9-202ENST00000379446 ADAMTS20P59510 1910 aa5.14□□□□□ -1.59
NEDD9-202ENST00000379446 CEP192Q8TEP8 1941 aa5.14□□□□□ -1.59
NEDD9-202ENST00000379446 IGFBP2P18065 325 aa5.14□□□□□ -1.59
NEDD9-202ENST00000379446 DEFB131BA0A096LNP1 70 aa5.14□□□□□ -1.59
NEDD9-202ENST00000379446 IGKV3D-20A0A0C4DH25 116 aa5.14□□□□□ -1.59
NEDD9-202ENST00000379446 Q1RN00 199 aa5.14□□□□□ -1.59
NEDD9-202ENST00000379446 COA6Q5JTJ3 125 aaKnown RBP5.14□□□□□ -1.59
NEDD9-202ENST00000379446 TMEM70Q9BUB7 260 aa5.14□□□□□ -1.59
NEDD9-202ENST00000379446 IGHV3-16A0A0C4DH30 117 aa5.13□□□□□ -1.59
NEDD9-202ENST00000379446 TEX50A0A1B0GTY4 177 aa5.13□□□□□ -1.59
NEDD9-202ENST00000379446 C15orf62A8K5M9 175 aa5.13□□□□□ -1.59
NEDD9-202ENST00000379446 IGLV2-14P01704 120 aa5.13□□□□□ -1.59
NEDD9-202ENST00000379446 HLA-DQA1P01909 254 aa5.13□□□□□ -1.59
NEDD9-202ENST00000379446 FAM162BQ5T6X4 162 aa5.13□□□□□ -1.59
NEDD9-202ENST00000379446 KIR2DL4Q99706 377 aa5.13□□□□□ -1.59
NEDD9-202ENST00000379446 C11orf68Q9H3H3 251 aaKnown RBP5.13□□□□□ -1.59
NEDD9-202ENST00000379446 CELSR3Q9NYQ7 3312 aa5.13□□□□□ -1.59
NEDD9-202ENST00000379446 TRAV21A0A0B4J279 112 aa5.13□□□□□ -1.59
NEDD9-202ENST00000379446 PRSS1P07477 247 aa5.13□□□□□ -1.59
NEDD9-202ENST00000379446 GCHFRP30047 84 aa5.13□□□□□ -1.59
NEDD9-202ENST00000379446 C9orf139Q6ZV77 190 aa5.13□□□□□ -1.59
NEDD9-202ENST00000379446 MAP1LC3CQ9BXW4 147 aa5.13□□□□□ -1.59
NEDD9-202ENST00000379446 WDR83OSQ9Y284 106 aa5.13□□□□□ -1.59
NEDD9-202ENST00000379446 SPCS1Q9Y6A9 102 aa5.13□□□□□ -1.59
NEDD9-202ENST00000379446 FLNAP21333 2647 aaKnown RBP5.13□□□□□ -1.59
NEDD9-202ENST00000379446 GAGE12JA6NER3 117 aa5.13□□□□□ -1.59
NEDD9-202ENST00000379446 G3V4G9 280 aa5.13□□□□□ -1.59
NEDD9-202ENST00000379446 GAGE4Q13068 117 aa5.13□□□□□ -1.59
NEDD9-202ENST00000379446 GAGE5Q13069 117 aa5.13□□□□□ -1.59
NEDD9-202ENST00000379446 RIGQ13278 110 aa5.13□□□□□ -1.59
NEDD9-202ENST00000379446 GAGE13Q4V321 117 aa5.13□□□□□ -1.59
NEDD9-202ENST00000379446 MEIG1Q5JSS6 88 aa5.13□□□□□ -1.59
NEDD9-202ENST00000379446 MIR17HGQ75NE6 70 aa5.13□□□□□ -1.59
NEDD9-202ENST00000379446 YTHDF2Q9Y5A9 579 aaKnown RBP5.13□□□□□ -1.59
NEDD9-202ENST00000379446 EXPH5Q8NEV8 1989 aa5.13□□□□□ -1.59
NEDD9-202ENST00000379446 TRAV12-2A0A075B6T6 113 aa5.13□□□□□ -1.59
NEDD9-202ENST00000379446 H3BMM0 161 aa5.13□□□□□ -1.59
NEDD9-202ENST00000379446 OR52E5Q8NH55 327 aa5.13□□□□□ -1.59
NEDD9-202ENST00000379446 UBE2WQ96B02 151 aa5.13□□□□□ -1.59
NEDD9-202ENST00000379446 PGLYRP4Q96LB8 373 aa5.13□□□□□ -1.59
NEDD9-202ENST00000379446 ZNF747Q9BV97 191 aa5.13□□□□□ -1.59
NEDD9-202ENST00000379446 NOP10Q9NPE3 64 aaKnown RBP5.13□□□□□ -1.59
NEDD9-202ENST00000379446 A0A1B0GV72 72 aa5.12□□□□□ -1.59
NEDD9-202ENST00000379446 HLA-DMBP28068 263 aa5.12□□□□□ -1.59
NEDD9-202ENST00000379446 SSBP2P81877 361 aaPredicted RBP5.12□□□□□ -1.59
NEDD9-202ENST00000379446 C19orf35Q6ZS72 473 aa5.12□□□□□ -1.59
NEDD9-202ENST00000379446 TSKUQ8WUA8 353 aa5.12□□□□□ -1.59
NEDD9-202ENST00000379446 C4orf3Q8WVX3 66 aa5.12□□□□□ -1.59
NEDD9-202ENST00000379446 C5orf30Q96GV9 206 aa5.12□□□□□ -1.59
NEDD9-202ENST00000379446 LINC00479Q96M42 142 aa5.12□□□□□ -1.59
NEDD9-202ENST00000379446 SRSF8Q9BRL6 282 aaKnown RBP5.12□□□□□ -1.59
NEDD9-202ENST00000379446 SIRPDQ9H106 197 aa5.12□□□□□ -1.59
NEDD9-202ENST00000379446 A0A1W2PPR1 153 aa5.12□□□□□ -1.59
NEDD9-202ENST00000379446 FAM231BA6NCW3 169 aa5.12□□□□□ -1.59
NEDD9-202ENST00000379446 ZNF561-AS1K7EIQ3 104 aa5.12□□□□□ -1.59
NEDD9-202ENST00000379446 FSHBP01225 129 aa5.12□□□□□ -1.59
NEDD9-202ENST00000379446 UBE2BP63146 152 aa5.12□□□□□ -1.59
NEDD9-202ENST00000379446 LYRM7Q5U5X0 104 aa5.12□□□□□ -1.59
NEDD9-202ENST00000379446 OR11H6Q8NGC7 330 aa5.12□□□□□ -1.59
NEDD9-202ENST00000379446 MGST2Q99735 147 aa5.12□□□□□ -1.59
NEDD9-202ENST00000379446 KLK9Q9UKQ9 250 aa5.12□□□□□ -1.59
NEDD9-202ENST00000379446 NDUFA4O00483 81 aa5.12□□□□□ -1.59
NEDD9-202ENST00000379446 C16orf54Q6UWD8 224 aa5.12□□□□□ -1.59
NEDD9-202ENST00000379446 PYGO2Q9BRQ0 406 aa5.12□□□□□ -1.59
NEDD9-202ENST00000379446 TRAV16A0A0A6YYK6 109 aaPredicted RBP5.11□□□□□ -1.59
NEDD9-202ENST00000379446 ADARB2-AS1A8MUL3 147 aa5.11□□□□□ -1.59
NEDD9-202ENST00000379446 PPIFP30405 207 aaKnown RBP5.11□□□□□ -1.59
NEDD9-202ENST00000379446 FER1L6-AS1Q8NA97 138 aa5.11□□□□□ -1.59
NEDD9-202ENST00000379446 HSPB8Q9UJY1 196 aa5.11□□□□□ -1.59
NEDD9-202ENST00000379446 COL5A1P20908 1838 aaPredicted RBP5.11□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 161.4 ms