RNA–Protein interactions for RNA: ENST00000378821.3

TMEM88B-201, Transcript of transmembrane protein 88B, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TMEM88B, Length 492 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88B-201ENST00000378821 C16orf74Q96GX8 76 aa13.32□□□□□ -0.28
TMEM88B-201ENST00000378821 TMPRSS5Q9H3S3 457 aa13.32□□□□□ -0.28
TMEM88B-201ENST00000378821 DNAH17Q9UFH2 4485 aa13.31□□□□□ -0.28
TMEM88B-201ENST00000378821 FAT2Q9NYQ8 4349 aa13.31□□□□□ -0.28
TMEM88B-201ENST00000378821 MAP1LC3B2A6NCE7 125 aa13.31□□□□□ -0.28
TMEM88B-201ENST00000378821 GPX1P07203 203 aa13.31□□□□□ -0.28
TMEM88B-201ENST00000378821 NMBP08949 121 aa13.31□□□□□ -0.28
TMEM88B-201ENST00000378821 SEC11BP0C7V7 166 aa13.31□□□□□ -0.28
TMEM88B-201ENST00000378821 HTN3P15516 51 aa13.31□□□□□ -0.28
TMEM88B-201ENST00000378821 RNASE4P34096 147 aaKnown RBP13.31□□□□□ -0.28
TMEM88B-201ENST00000378821 FHITP49789 147 aa13.31□□□□□ -0.28
TMEM88B-201ENST00000378821 LGALSLQ3ZCW2 172 aaPredicted RBP13.31□□□□□ -0.28
TMEM88B-201ENST00000378821 ARL6IP6Q8N6S5 226 aa13.31□□□□□ -0.28
TMEM88B-201ENST00000378821 C15orf53Q8NAA6 179 aa13.31□□□□□ -0.28
TMEM88B-201ENST00000378821 TMEM263Q8WUH6 116 aaKnown RBP13.31□□□□□ -0.28
TMEM88B-201ENST00000378821 MAP1LC3BQ9GZQ8 125 aa13.31□□□□□ -0.28
TMEM88B-201ENST00000378821 NACAE9PAV3 2078 aa13.31□□□□□ -0.28
TMEM88B-201ENST00000378821 DNAH2Q9P225 4427 aa13.3□□□□□ -0.28
TMEM88B-201ENST00000378821 TRBV7-9A0A0J9YWB2 115 aa13.3□□□□□ -0.28
TMEM88B-201ENST00000378821 ZNF324O75467 553 aaPredicted RBP13.3□□□□□ -0.28
TMEM88B-201ENST00000378821 Q6ZQT7 251 aa13.3□□□□□ -0.28
TMEM88B-201ENST00000378821 ZNF493Q6ZR52 646 aa13.3□□□□□ -0.28
TMEM88B-201ENST00000378821 C5orf17Q8NAS9 161 aa13.3□□□□□ -0.28
TMEM88B-201ENST00000378821 PYGO2Q9BRQ0 406 aa13.3□□□□□ -0.28
TMEM88B-201ENST00000378821 HERC2O95714 4834 aa13.29□□□□□ -0.28
TMEM88B-201ENST00000378821 TRAV8-1A0A0A6YYK1 113 aa13.29□□□□□ -0.28
TMEM88B-201ENST00000378821 A0A1B0GVG6 124 aa13.29□□□□□ -0.28
TMEM88B-201ENST00000378821 FAM3BP58499 235 aaPredicted RBP13.29□□□□□ -0.28
TMEM88B-201ENST00000378821 EIF5AP63241 154 aaKnown RBP13.29□□□□□ -0.28
TMEM88B-201ENST00000378821 STOML3Q8TAV4 291 aa13.29□□□□□ -0.28
TMEM88B-201ENST00000378821 TMED6Q8WW62 240 aa13.29□□□□□ -0.28
TMEM88B-201ENST00000378821 A0A1W2PRE2 83 aa13.28□□□□□ -0.28
TMEM88B-201ENST00000378821 CBY3A6NI87 242 aa13.28□□□□□ -0.28
TMEM88B-201ENST00000378821 M0R2N4 97 aa13.28□□□□□ -0.28
TMEM88B-201ENST00000378821 TCRAP04437 139 aa13.28□□□□□ -0.28
TMEM88B-201ENST00000378821 TPT1P13693 172 aaKnown RBP13.28□□□□□ -0.28
TMEM88B-201ENST00000378821 UBE2G2P60604 165 aa13.28□□□□□ -0.28
TMEM88B-201ENST00000378821 SUMO1P63165 101 aaKnown RBP13.28□□□□□ -0.28
TMEM88B-201ENST00000378821 LENEPQ9Y5L5 61 aa13.28□□□□□ -0.28
TMEM88B-201ENST00000378821 UMAD1C9J7I0 102 aa13.27□□□□□ -0.29
TMEM88B-201ENST00000378821 DEFB130BP0DP73 79 aa13.27□□□□□ -0.29
TMEM88B-201ENST00000378821 DEFB130AP0DP74 79 aa13.27□□□□□ -0.29
TMEM88B-201ENST00000378821 UBE2DNLQ8IWF7 75 aa13.27□□□□□ -0.29
TMEM88B-201ENST00000378821 CCDC28AQ8IWP9 274 aa13.27□□□□□ -0.29
TMEM88B-201ENST00000378821 LINC00612Q8N6U2 182 aa13.27□□□□□ -0.29
TMEM88B-201ENST00000378821 FAM213BQ8TBF2 198 aa13.27□□□□□ -0.29
TMEM88B-201ENST00000378821 TIMM8BQ9Y5J9 83 aaPredicted RBP13.27□□□□□ -0.29
TMEM88B-201ENST00000378821 SERTM2A0A1B0GWG4 89 aa13.26□□□□□ -0.29
TMEM88B-201ENST00000378821 TVP23CQ96ET8 276 aa13.26□□□□□ -0.29
TMEM88B-201ENST00000378821 SGK494Q96LW2 274 aa13.26□□□□□ -0.29
TMEM88B-201ENST00000378821 LINC00467Q9BRT7 94 aa13.26□□□□□ -0.29
TMEM88B-201ENST00000378821 NOP10Q9NPE3 64 aaKnown RBP13.26□□□□□ -0.29
TMEM88B-201ENST00000378821 EPDR1Q9UM22 224 aa13.26□□□□□ -0.29
TMEM88B-201ENST00000378821 PRSS29PA6NIE9 313 aa13.25□□□□□ -0.29
TMEM88B-201ENST00000378821 FAM74A7A6NL05 159 aa13.25□□□□□ -0.29
TMEM88B-201ENST00000378821 ATP5G1P05496 136 aa13.25□□□□□ -0.29
TMEM88B-201ENST00000378821 ATP5G3P48201 142 aa13.25□□□□□ -0.29
TMEM88B-201ENST00000378821 EIF4E3Q8N5X7 224 aaKnown RBP13.25□□□□□ -0.29
TMEM88B-201ENST00000378821 F6UZH7 168 aa13.24□□□□□ -0.29
TMEM88B-201ENST00000378821 RGS13O14921 159 aa13.24□□□□□ -0.29
TMEM88B-201ENST00000378821 Q6AWC8 147 aa13.24□□□□□ -0.29
TMEM88B-201ENST00000378821 DPPA3Q6W0C5 159 aa13.24□□□□□ -0.29
TMEM88B-201ENST00000378821 CYB561D1Q8N8Q1 229 aa13.24□□□□□ -0.29
TMEM88B-201ENST00000378821 C11orf72Q8NBR9 251 aa13.24□□□□□ -0.29
TMEM88B-201ENST00000378821 MBD3L1Q8WWY6 194 aa13.24□□□□□ -0.29
TMEM88B-201ENST00000378821 ATG101Q9BSB4 218 aa13.24□□□□□ -0.29
TMEM88B-201ENST00000378821 IGLV2-18A0A075B6J9 118 aa13.23□□□□□ -0.29
TMEM88B-201ENST00000378821 IGHV1OR15-1A0A075B7D0 117 aa13.23□□□□□ -0.29
TMEM88B-201ENST00000378821 A0A1B0GV50 99 aa13.23□□□□□ -0.29
TMEM88B-201ENST00000378821 SNURFLB1AK76 121 aa13.23□□□□□ -0.29
TMEM88B-201ENST00000378821 IGLV2-11P01706 119 aa13.23□□□□□ -0.29
TMEM88B-201ENST00000378821 ANXA2RQ3ZCQ2 193 aa13.23□□□□□ -0.29
TMEM88B-201ENST00000378821 C9orf62Q8N4C0 152 aa13.23□□□□□ -0.29
TMEM88B-201ENST00000378821 ZNF680Q8NEM1 530 aa13.23□□□□□ -0.29
TMEM88B-201ENST00000378821 SFT2D1Q8WV19 159 aa13.23□□□□□ -0.29
TMEM88B-201ENST00000378821 TREM1Q9NP99 234 aa13.23□□□□□ -0.29
TMEM88B-201ENST00000378821 TP53TG3Q9ULZ0 132 aa13.23□□□□□ -0.29
TMEM88B-201ENST00000378821 KIAA1109Q2LD37 5005 aa13.23□□□□□ -0.29
TMEM88B-201ENST00000378821 PKD1P98161 4303 aa13.23□□□□□ -0.29
TMEM88B-201ENST00000378821 F5H768 121 aa13.22□□□□□ -0.29
TMEM88B-201ENST00000378821 K7EQM0 130 aa13.22□□□□□ -0.29
TMEM88B-201ENST00000378821 MUC21Q5SSG8 566 aa13.22□□□□□ -0.29
TMEM88B-201ENST00000378821 TMEM75Q8N9X5 138 aa13.22□□□□□ -0.29
TMEM88B-201ENST00000378821 KRTAP17-1Q9BYP8 105 aa13.22□□□□□ -0.29
TMEM88B-201ENST00000378821 GSN-AS1Q9NRJ2 163 aa13.22□□□□□ -0.29
TMEM88B-201ENST00000378821 PSG8Q9UQ74 426 aa13.22□□□□□ -0.29
TMEM88B-201ENST00000378821 PEX7O00628 323 aa13.21□□□□□ -0.29
TMEM88B-201ENST00000378821 IFNA7P01567 189 aa13.21□□□□□ -0.29
TMEM88B-201ENST00000378821 FLI1Q01543 452 aaPredicted RBP13.21□□□□□ -0.29
TMEM88B-201ENST00000378821 ZFP69Q49AA0 526 aa13.21□□□□□ -0.29
TMEM88B-201ENST00000378821 SLC51BQ86UW2 128 aa13.21□□□□□ -0.29
TMEM88B-201ENST00000378821 C8orf49Q96NF6 230 aa13.21□□□□□ -0.29
TMEM88B-201ENST00000378821 NKX6-2Q9C056 277 aaPredicted RBP13.21□□□□□ -0.29
TMEM88B-201ENST00000378821 MUC4Q99102 2169 aa13.21□□□□□ -0.3
TMEM88B-201ENST00000378821 PKHD1P08F94 4074 aa13.21□□□□□ -0.3
TMEM88B-201ENST00000378821 TRAV34A0A0B4J273 112 aa13.2□□□□□ -0.3
TMEM88B-201ENST00000378821 DAZ2Q13117 558 aaKnown RBP13.2□□□□□ -0.3
TMEM88B-201ENST00000378821 PRNTQ86SH4 94 aa13.2□□□□□ -0.3
TMEM88B-201ENST00000378821 ZNRF2Q8NHG8 242 aa13.2□□□□□ -0.3
TMEM88B-201ENST00000378821 LINC00479Q96M42 142 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms