RNA–Protein interactions for RNA: ENST00000378182.3

TRIM13-202, Transcript of tripartite motif containing 13, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TRIM13, Length 7,249 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13-202ENST00000378182 INAFM2P0DMQ5 153 aa11.24□□□□□ -0.61
TRIM13-202ENST00000378182 BTCP35070 178 aa11.23□□□□□ -0.61
TRIM13-202ENST00000378182 TMEM14BQ9NUH8 114 aa11.23□□□□□ -0.61
TRIM13-202ENST00000378182 TANC2Q9HCD6 1990 aa11.23□□□□□ -0.61
TRIM13-202ENST00000378182 GNRH2O43555 120 aa11.23□□□□□ -0.61
TRIM13-202ENST00000378182 NDUFAF3Q9BU61 184 aa11.23□□□□□ -0.61
TRIM13-202ENST00000378182 KLK5Q9Y337 293 aaPredicted RBP11.23□□□□□ -0.61
TRIM13-202ENST00000378182 A0A0G2JRQ6 117 aa11.23□□□□□ -0.61
TRIM13-202ENST00000378182 IGHV7-4-1A0A0J9YVY3 117 aa11.23□□□□□ -0.61
TRIM13-202ENST00000378182 ETDCA0A1B0GVM5 59 aa11.23□□□□□ -0.61
TRIM13-202ENST00000378182 C5orf47Q569G3 176 aa11.23□□□□□ -0.61
TRIM13-202ENST00000378182 FANCD2OSQ96PS1 177 aa11.23□□□□□ -0.61
TRIM13-202ENST00000378182 ACACAQ13085 2346 aa11.23□□□□□ -0.61
TRIM13-202ENST00000378182 SDHAF1A6NFY7 115 aa11.23□□□□□ -0.61
TRIM13-202ENST00000378182 C5orf38Q86SI9 138 aa11.22□□□□□ -0.61
TRIM13-202ENST00000378182 LINC01551Q86U37 167 aa11.22□□□□□ -0.61
TRIM13-202ENST00000378182 CFHR4Q92496 578 aa11.22□□□□□ -0.61
TRIM13-202ENST00000378182 SRSF8Q9BRL6 282 aaKnown RBP11.22□□□□□ -0.61
TRIM13-202ENST00000378182 SYS1-DBNDD2H3BUS1 97 aa11.22□□□□□ -0.61
TRIM13-202ENST00000378182 ZNF362Q5T0B9 420 aaPredicted RBP11.22□□□□□ -0.61
TRIM13-202ENST00000378182 MRPL27Q9P0M9 148 aaKnown RBP11.22□□□□□ -0.61
TRIM13-202ENST00000378182 ICOSQ9Y6W8 199 aa11.22□□□□□ -0.61
TRIM13-202ENST00000378182 HLA-DMBP28068 263 aa11.21□□□□□ -0.61
TRIM13-202ENST00000378182 C2orf16Q68DN1 1984 aa11.21□□□□□ -0.61
TRIM13-202ENST00000378182 NMSQ5H8A3 153 aa11.21□□□□□ -0.61
TRIM13-202ENST00000378182 FBLN5Q9UBX5 448 aa11.21□□□□□ -0.61
TRIM13-202ENST00000378182 K7EM74 188 aa11.21□□□□□ -0.61
TRIM13-202ENST00000378182 GTSF1LQ9H1H1 148 aa11.21□□□□□ -0.61
TRIM13-202ENST00000378182 C15orf53Q8NAA6 179 aa11.21□□□□□ -0.61
TRIM13-202ENST00000378182 RNF138Q8WVD3 245 aa11.21□□□□□ -0.61
TRIM13-202ENST00000378182 J3QRE1 110 aa11.21□□□□□ -0.62
TRIM13-202ENST00000378182 C17orf58Q2M2W7 97 aa11.21□□□□□ -0.62
TRIM13-202ENST00000378182 ZNF833PQ6ZTB9 187 aa11.21□□□□□ -0.62
TRIM13-202ENST00000378182 TMEM141Q96I45 108 aa11.21□□□□□ -0.62
TRIM13-202ENST00000378182 PCNX1Q96RV3 2341 aa11.2□□□□□ -0.62
TRIM13-202ENST00000378182 RHOHQ15669 191 aa11.2□□□□□ -0.62
TRIM13-202ENST00000378182 WFDC11Q8NEX6 87 aa11.2□□□□□ -0.62
TRIM13-202ENST00000378182 CAMK2N2Q96S95 79 aa11.2□□□□□ -0.62
TRIM13-202ENST00000378182 UBL5Q9BZL1 73 aa11.2□□□□□ -0.62
TRIM13-202ENST00000378182 CSRP3P50461 194 aa11.2□□□□□ -0.62
TRIM13-202ENST00000378182 C2orf66Q6UXQ4 117 aa11.2□□□□□ -0.62
TRIM13-202ENST00000378182 NPBQ8NG41 125 aa11.2□□□□□ -0.62
TRIM13-202ENST00000378182 MRPL53Q96EL3 112 aaKnown RBP11.2□□□□□ -0.62
TRIM13-202ENST00000378182 TRACP01848 142 aa11.2□□□□□ -0.62
TRIM13-202ENST00000378182 IGHV2-5P01817 119 aa11.2□□□□□ -0.62
TRIM13-202ENST00000378182 WDR86Q86TI4 376 aa11.2□□□□□ -0.62
TRIM13-202ENST00000378182 NBL1P41271 181 aa11.19□□□□□ -0.62
TRIM13-202ENST00000378182 SEM1Q6ZVN7 128 aa11.19□□□□□ -0.62
TRIM13-202ENST00000378182 TNRC6BQ9UPQ9 1833 aaKnown RBP11.19□□□□□ -0.62
TRIM13-202ENST00000378182 IGLV3-9A0A075B6K5 115 aa11.19□□□□□ -0.62
TRIM13-202ENST00000378182 HIST1H2BLQ99880 126 aa11.19□□□□□ -0.62
TRIM13-202ENST00000378182 PLCE1Q9P212 2302 aa11.19□□□□□ -0.62
TRIM13-202ENST00000378182 SPART-AS1P0CW21 52 aa11.19□□□□□ -0.62
TRIM13-202ENST00000378182 LINC01559Q495D7 138 aa11.19□□□□□ -0.62
TRIM13-202ENST00000378182 C9orf47Q6ZRZ4 202 aa11.18□□□□□ -0.62
TRIM13-202ENST00000378182 EGR2P11161 476 aaPredicted RBP11.18□□□□□ -0.62
TRIM13-202ENST00000378182 PDE6HQ13956 83 aa11.18□□□□□ -0.62
TRIM13-202ENST00000378182 MRPL51Q4U2R6 128 aaKnown RBP11.18□□□□□ -0.62
TRIM13-202ENST00000378182 GTSF1Q8WW33 167 aa11.18□□□□□ -0.62
TRIM13-202ENST00000378182 FGF16O43320 207 aa11.18□□□□□ -0.62
TRIM13-202ENST00000378182 SLAQ13239 276 aa11.18□□□□□ -0.62
TRIM13-202ENST00000378182 TMEM14EPQ6UXP3 125 aa11.18□□□□□ -0.62
TRIM13-202ENST00000378182 ADAMTSL5Q6ZMM2 481 aa11.18□□□□□ -0.62
TRIM13-202ENST00000378182 A0A1B0GW64 132 aa11.18□□□□□ -0.62
TRIM13-202ENST00000378182 BOD1L2Q8IYS8 172 aa11.18□□□□□ -0.62
TRIM13-202ENST00000378182 NDUFA4L2Q9NRX3 87 aa11.18□□□□□ -0.62
TRIM13-202ENST00000378182 DEFB135Q30KP9 77 aa11.18□□□□□ -0.62
TRIM13-202ENST00000378182 NCR3O14931 201 aa11.17□□□□□ -0.62
TRIM13-202ENST00000378182 Q6ZR03 302 aa11.17□□□□□ -0.62
TRIM13-202ENST00000378182 C17orf82Q86X59 251 aaPredicted RBP11.17□□□□□ -0.62
TRIM13-202ENST00000378182 BAALCQ8WXS3 180 aa11.17□□□□□ -0.62
TRIM13-202ENST00000378182 IGHV4-61A0A0C4DH41 118 aa11.17□□□□□ -0.62
TRIM13-202ENST00000378182 FGF6P10767 208 aa11.17□□□□□ -0.62
TRIM13-202ENST00000378182 LOXP28300 417 aaPredicted RBP11.17□□□□□ -0.62
TRIM13-202ENST00000378182 MPV17L2Q567V2 206 aa11.17□□□□□ -0.62
TRIM13-202ENST00000378182 NDUFA12Q9UI09 145 aa11.17□□□□□ -0.62
TRIM13-202ENST00000378182 PCNX2A6NKB5 2137 aa11.17□□□□□ -0.62
TRIM13-202ENST00000378182 FOXE3Q13461 319 aa11.17□□□□□ -0.62
TRIM13-202ENST00000378182 C3orf79P0CE67 100 aa11.17□□□□□ -0.62
TRIM13-202ENST00000378182 PRSS46E5RG02 174 aa11.16□□□□□ -0.62
TRIM13-202ENST00000378182 Q6ZRM9 215 aa11.16□□□□□ -0.62
TRIM13-202ENST00000378182 THSD7BQ9C0I4 1608 aa11.16□□□□□ -0.62
TRIM13-202ENST00000378182 ELANEP08246 267 aa11.16□□□□□ -0.62
TRIM13-202ENST00000378182 C17orf77Q96MU5 243 aa11.16□□□□□ -0.62
TRIM13-202ENST00000378182 HERVK_113P63121 156 aa11.16□□□□□ -0.62
TRIM13-202ENST00000378182 CYYR1Q96J86 154 aa11.16□□□□□ -0.62
TRIM13-202ENST00000378182 TM2D2Q9BX73 214 aa11.16□□□□□ -0.62
TRIM13-202ENST00000378182 SIP14410 1827 aa11.15□□□□□ -0.62
TRIM13-202ENST00000378182 ARHGAP21Q5T5U3 1957 aa11.15□□□□□ -0.62
TRIM13-202ENST00000378182 ZNF503-AS2A6NEH8 195 aa11.15□□□□□ -0.62
TRIM13-202ENST00000378182 AMTNQ6UX39 209 aa11.15□□□□□ -0.62
TRIM13-202ENST00000378182 PKDREJQ9NTG1 2253 aa11.15□□□□□ -0.62
TRIM13-202ENST00000378182 TRBV19A0A075B6N1 114 aa11.15□□□□□ -0.62
TRIM13-202ENST00000378182 YPEL3P61236 119 aaPredicted RBP11.15□□□□□ -0.62
TRIM13-202ENST00000378182 FOXI2Q6ZQN5 318 aa11.15□□□□□ -0.62
TRIM13-202ENST00000378182 WIPF3A6NGB9 483 aa11.15□□□□□ -0.63
TRIM13-202ENST00000378182 PROP1O75360 226 aa11.15□□□□□ -0.63
TRIM13-202ENST00000378182 TRAV13-2A0A0B4J235 113 aa11.14□□□□□ -0.63
TRIM13-202ENST00000378182 SHISA9B4DS77 424 aa11.14□□□□□ -0.63
TRIM13-202ENST00000378182 Q8N8P6 123 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms