RNA–Protein interactions for RNA: ENST00000378156.8

NPHP4-201, Transcript of nephrocystin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPHP4, Length 4,994 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-201ENST00000378156 MYO18BQ8IUG5 2567 aa11.96□□□□□ -0.5
NPHP4-201ENST00000378156 J3QKU1 62 aa11.96□□□□□ -0.5
NPHP4-201ENST00000378156 ARMS2P0C7Q2 107 aa11.96□□□□□ -0.5
NPHP4-201ENST00000378156 Q6ZWC4 215 aa11.96□□□□□ -0.5
NPHP4-201ENST00000378156 CHCHD5Q9BSY4 110 aa11.96□□□□□ -0.5
NPHP4-201ENST00000378156 KLF2Q9Y5W3 355 aaPredicted RBP11.96□□□□□ -0.5
NPHP4-201ENST00000378156 CEP350Q5VT06 3117 aa11.96□□□□□ -0.5
NPHP4-201ENST00000378156 TMEM131Q92545 1883 aa11.95□□□□□ -0.5
NPHP4-201ENST00000378156 VWC2Q2TAL6 325 aa11.95□□□□□ -0.5
NPHP4-201ENST00000378156 C11orf52Q96A22 123 aa11.95□□□□□ -0.5
NPHP4-201ENST00000378156 FAM231DQ6ZW35 169 aa11.95□□□□□ -0.5
NPHP4-201ENST00000378156 LY6G5BQ8NDX9 201 aa11.95□□□□□ -0.5
NPHP4-201ENST00000378156 TRAV8-3A0A0A6YYJ7 113 aa11.95□□□□□ -0.5
NPHP4-201ENST00000378156 K7EP34 96 aa11.95□□□□□ -0.5
NPHP4-201ENST00000378156 INAFM2P0DMQ5 153 aa11.95□□□□□ -0.5
NPHP4-201ENST00000378156 Q6ZPA2 131 aa11.95□□□□□ -0.5
NPHP4-201ENST00000378156 LSM4Q9Y4Z0 139 aaKnown RBP11.95□□□□□ -0.5
NPHP4-201ENST00000378156 LEPROTO15243 131 aa11.95□□□□□ -0.5
NPHP4-201ENST00000378156 RPL36AP83881 106 aaKnown RBP11.95□□□□□ -0.5
NPHP4-201ENST00000378156 C9orf153Q5TBE3 101 aa11.95□□□□□ -0.5
NPHP4-201ENST00000378156 RPL36ALQ969Q0 106 aaKnown RBP11.95□□□□□ -0.5
NPHP4-201ENST00000378156 TIMM21Q9BVV7 248 aa11.95□□□□□ -0.5
NPHP4-201ENST00000378156 SMKR1H3BMG3 65 aa11.94□□□□□ -0.5
NPHP4-201ENST00000378156 WISP2O76076 250 aa11.94□□□□□ -0.5
NPHP4-201ENST00000378156 COX8AP10176 69 aa11.94□□□□□ -0.5
NPHP4-201ENST00000378156 C1orf122Q6ZSJ8 110 aa11.94□□□□□ -0.5
NPHP4-201ENST00000378156 K7EN84 100 aa11.94□□□□□ -0.5
NPHP4-201ENST00000378156 LHBP01229 141 aa11.94□□□□□ -0.5
NPHP4-201ENST00000378156 TSSC4Q9Y5U2 329 aaPredicted RBP11.94□□□□□ -0.5
NPHP4-201ENST00000378156 IGLV2-14P01704 120 aa11.94□□□□□ -0.5
NPHP4-201ENST00000378156 ERCC8Q13216 396 aa11.94□□□□□ -0.5
NPHP4-201ENST00000378156 J3QLI3 93 aa11.93□□□□□ -0.5
NPHP4-201ENST00000378156 DTX2Q86UW9 622 aa11.93□□□□□ -0.5
NPHP4-201ENST00000378156 TRBV19A0A075B6N1 114 aa11.93□□□□□ -0.5
NPHP4-201ENST00000378156 ZNF415Q09FC8 603 aa11.93□□□□□ -0.5
NPHP4-201ENST00000378156 LGALS9BQ3B8N2 356 aa11.93□□□□□ -0.5
NPHP4-201ENST00000378156 LGALS9CQ6DKI2 356 aa11.93□□□□□ -0.5
NPHP4-201ENST00000378156 C14orf178Q8N769 122 aaPredicted RBP11.93□□□□□ -0.5
NPHP4-201ENST00000378156 IGHV1-24A0A0C4DH33 117 aa11.93□□□□□ -0.5
NPHP4-201ENST00000378156 FAM104BQ5XKR9 115 aa11.93□□□□□ -0.5
NPHP4-201ENST00000378156 DEFB131AP59861 70 aa11.92□□□□□ -0.5
NPHP4-201ENST00000378156 C8orf31Q8N9H6 132 aa11.92□□□□□ -0.5
NPHP4-201ENST00000378156 ZNF48Q96MX3 618 aaPredicted RBP11.92□□□□□ -0.5
NPHP4-201ENST00000378156 LAMTOR3Q9UHA4 124 aa11.92□□□□□ -0.5
NPHP4-201ENST00000378156 RNF114Q9Y508 228 aa11.92□□□□□ -0.5
NPHP4-201ENST00000378156 PRSS46E5RG02 174 aa11.92□□□□□ -0.5
NPHP4-201ENST00000378156 H3BMM0 161 aa11.92□□□□□ -0.5
NPHP4-201ENST00000378156 IGLL1P15814 213 aa11.92□□□□□ -0.5
NPHP4-201ENST00000378156 ETDBQ3ZM63 59 aa11.92□□□□□ -0.5
NPHP4-201ENST00000378156 TMEM75Q8N9X5 138 aa11.92□□□□□ -0.5
NPHP4-201ENST00000378156 UBE2WQ96B02 151 aa11.92□□□□□ -0.5
NPHP4-201ENST00000378156 TRGV1A0A0A0MS02 117 aa11.92□□□□□ -0.5
NPHP4-201ENST00000378156 SEM1Q6ZVN7 128 aa11.92□□□□□ -0.5
NPHP4-201ENST00000378156 C1QTNF4Q9BXJ3 329 aa11.92□□□□□ -0.5
NPHP4-201ENST00000378156 ARHGAP21Q5T5U3 1957 aa11.92□□□□□ -0.5
NPHP4-201ENST00000378156 VWC2LB2RUY7 222 aa11.91□□□□□ -0.5
NPHP4-201ENST00000378156 RPL35AP18077 110 aaKnown RBP11.91□□□□□ -0.5
NPHP4-201ENST00000378156 NPC2P61916 151 aa11.91□□□□□ -0.5
NPHP4-201ENST00000378156 TAL2Q16559 108 aa11.91□□□□□ -0.5
NPHP4-201ENST00000378156 UBE2E2Q96LR5 201 aa11.91□□□□□ -0.5
NPHP4-201ENST00000378156 PRADC1Q9BSG0 188 aa11.91□□□□□ -0.5
NPHP4-201ENST00000378156 FXYD5Q96DB9 178 aa11.91□□□□□ -0.5
NPHP4-201ENST00000378156 C11orf1Q9H5F2 150 aa11.91□□□□□ -0.5
NPHP4-201ENST00000378156 MUC22E2RYF6 1773 aaPredicted RBP11.91□□□□□ -0.5
NPHP4-201ENST00000378156 IGHV3-73A0A0B4J1V6 119 aa11.91□□□□□ -0.5
NPHP4-201ENST00000378156 IGLC1P0CG04 106 aa11.91□□□□□ -0.5
NPHP4-201ENST00000378156 GAGE2AQ6NT46 116 aa11.91□□□□□ -0.5
NPHP4-201ENST00000378156 TMEM213A2RRL7 107 aa11.9□□□□□ -0.5
NPHP4-201ENST00000378156 IL17RELQ6ZVW7 336 aa11.9□□□□□ -0.5
NPHP4-201ENST00000378156 Q8N8P6 123 aa11.9□□□□□ -0.5
NPHP4-201ENST00000378156 IGF2RP11717 2491 aa11.9□□□□□ -0.5
NPHP4-201ENST00000378156 SMIM27A0A1W2PRY6 76 aa11.9□□□□□ -0.5
NPHP4-201ENST00000378156 DEFB104AQ8WTQ1 72 aa11.9□□□□□ -0.5
NPHP4-201ENST00000378156 INSP01308 110 aa11.9□□□□□ -0.5
NPHP4-201ENST00000378156 TMEM141Q96I45 108 aa11.9□□□□□ -0.5
NPHP4-201ENST00000378156 ATP6V0BQ99437 205 aa11.9□□□□□ -0.5
NPHP4-201ENST00000378156 C8orf49Q96NF6 230 aa11.9□□□□□ -0.5
NPHP4-201ENST00000378156 SIVA1O15304 175 aa11.89□□□□□ -0.51
NPHP4-201ENST00000378156 PRIMA1Q86XR5 153 aa11.89□□□□□ -0.51
NPHP4-201ENST00000378156 PYGO2Q9BRQ0 406 aa11.89□□□□□ -0.51
NPHP4-201ENST00000378156 BVES-AS1Q5T3Y7 98 aa11.89□□□□□ -0.51
NPHP4-201ENST00000378156 A0A1W2PPM0 123 aa11.89□□□□□ -0.51
NPHP4-201ENST00000378156 ADAMTS9Q9P2N4 1935 aa11.89□□□□□ -0.51
NPHP4-201ENST00000378156 GAGE12HA6NDE8 117 aa11.89□□□□□ -0.51
NPHP4-201ENST00000378156 NDUFA4O00483 81 aa11.89□□□□□ -0.51
NPHP4-201ENST00000378156 SPANXCQ9NY87 97 aa11.88□□□□□ -0.51
NPHP4-201ENST00000378156 PLA2G5P39877 138 aa11.88□□□□□ -0.51
NPHP4-201ENST00000378156 OR11H6Q8NGC7 330 aa11.88□□□□□ -0.51
NPHP4-201ENST00000378156 CCDC168Q8NDH2 2452 aa11.88□□□□□ -0.51
NPHP4-201ENST00000378156 THAP8Q8NA92 274 aa11.88□□□□□ -0.51
NPHP4-201ENST00000378156 C6orf226Q5I0X4 101 aa11.87□□□□□ -0.51
NPHP4-201ENST00000378156 FAM120AOSQ5T036 256 aa11.87□□□□□ -0.51
NPHP4-201ENST00000378156 UTF1Q5T230 341 aa11.87□□□□□ -0.51
NPHP4-201ENST00000378156 C2orf66Q6UXQ4 117 aa11.87□□□□□ -0.51
NPHP4-201ENST00000378156 SPXQ9BT56 116 aa11.87□□□□□ -0.51
NPHP4-201ENST00000378156 TMEM14CQ9P0S9 112 aa11.87□□□□□ -0.51
NPHP4-201ENST00000378156 PCNTO95613 3336 aa11.87□□□□□ -0.51
NPHP4-201ENST00000378156 A0A087WX48 190 aa11.87□□□□□ -0.51
NPHP4-201ENST00000378156 IGLC7A0M8Q6 106 aa11.87□□□□□ -0.51
NPHP4-201ENST00000378156 LINC01619G3V211 115 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms