RNA–Protein interactions for RNA: ENST00000378043.8

BEST1-201, Transcript of bestrophin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BEST1, Length 2,740 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1-201ENST00000378043 PIFOQ8TCI5 191 aa8.38□□□□□ -1.07
BEST1-201ENST00000378043 RNASE8Q8TDE3 154 aaKnown RBP8.38□□□□□ -1.07
BEST1-201ENST00000378043 DKK2Q9UBU2 259 aa8.38□□□□□ -1.07
BEST1-201ENST00000378043 LINC00527Q9UJ94 153 aa8.38□□□□□ -1.07
BEST1-201ENST00000378043 TNFRSF6BO95407 300 aa8.37□□□□□ -1.07
BEST1-201ENST00000378043 VAMP3Q15836 100 aa8.37□□□□□ -1.07
BEST1-201ENST00000378043 BOD1L2Q8IYS8 172 aa8.37□□□□□ -1.07
BEST1-201ENST00000378043 ITLN2Q8WWU7 325 aaPredicted RBP8.37□□□□□ -1.07
BEST1-201ENST00000378043 METTL26Q96S19 204 aa8.37□□□□□ -1.07
BEST1-201ENST00000378043 IGHV3OR16-10A0A075B7F0 116 aa8.37□□□□□ -1.07
BEST1-201ENST00000378043 IGHV7-4-1A0A0J9YVY3 117 aa8.37□□□□□ -1.07
BEST1-201ENST00000378043 CD5LO43866 347 aa8.37□□□□□ -1.07
BEST1-201ENST00000378043 TRGV3P03979 118 aa8.37□□□□□ -1.07
BEST1-201ENST00000378043 OR1N2Q8NGR9 330 aa8.37□□□□□ -1.07
BEST1-201ENST00000378043 MAP1LC3AQ9H492 121 aa8.37□□□□□ -1.07
BEST1-201ENST00000378043 UQCRFS1P47985 274 aa8.36□□□□□ -1.07
BEST1-201ENST00000378043 C18orf15Q96N68 181 aa8.36□□□□□ -1.07
BEST1-201ENST00000378043 CBY3A6NI87 242 aa8.36□□□□□ -1.07
BEST1-201ENST00000378043 C9orf47Q6ZRZ4 202 aa8.36□□□□□ -1.07
BEST1-201ENST00000378043 IGLV2-18A0A075B6J9 118 aa8.35□□□□□ -1.07
BEST1-201ENST00000378043 K7EP13 123 aa8.35□□□□□ -1.07
BEST1-201ENST00000378043 LEPP41159 167 aa8.35□□□□□ -1.07
BEST1-201ENST00000378043 ATP5G2Q06055 141 aa8.35□□□□□ -1.07
BEST1-201ENST00000378043 TMEM97Q5BJF2 176 aa8.35□□□□□ -1.07
BEST1-201ENST00000378043 TMEM78Q5T7P6 136 aa8.35□□□□□ -1.07
BEST1-201ENST00000378043 MRPL53Q96EL3 112 aaKnown RBP8.35□□□□□ -1.07
BEST1-201ENST00000378043 TRAV41A0A0B4J266 112 aa8.35□□□□□ -1.07
BEST1-201ENST00000378043 IGHV4-39P01824 125 aa8.35□□□□□ -1.07
BEST1-201ENST00000378043 FCER1GP30273 86 aa8.35□□□□□ -1.07
BEST1-201ENST00000378043 PRR9Q5T870 116 aa8.35□□□□□ -1.07
BEST1-201ENST00000378043 AMMECR1LQ6DCA0 310 aa8.35□□□□□ -1.07
BEST1-201ENST00000378043 PCP2Q8IVA1 136 aa8.35□□□□□ -1.07
BEST1-201ENST00000378043 OR4C5Q8NGB2 326 aa8.35□□□□□ -1.07
BEST1-201ENST00000378043 C20orf173Q96LM9 149 aa8.35□□□□□ -1.07
BEST1-201ENST00000378043 TRAV8-6A0A0B4J262 113 aa8.34□□□□□ -1.07
BEST1-201ENST00000378043 TRBV12-3P01733 135 aa8.34□□□□□ -1.07
BEST1-201ENST00000378043 IGF1P05019 195 aa8.34□□□□□ -1.07
BEST1-201ENST00000378043 UNQ9165/PRO28630Q6UXU0 137 aa8.34□□□□□ -1.07
BEST1-201ENST00000378043 BRD3OSQ6XYD6 125 aa8.34□□□□□ -1.07
BEST1-201ENST00000378043 GPHB5Q86YW7 130 aa8.34□□□□□ -1.07
BEST1-201ENST00000378043 GLMPQ8WWB7 406 aa8.34□□□□□ -1.07
BEST1-201ENST00000378043 NXT2Q9NPJ8 142 aaKnown RBP8.34□□□□□ -1.07
BEST1-201ENST00000378043 SMAD7O15105 426 aaKnown RBP8.34□□□□□ -1.07
BEST1-201ENST00000378043 ODF1Q14990 250 aa8.34□□□□□ -1.07
BEST1-201ENST00000378043 ADAMTSL5Q6ZMM2 481 aa8.34□□□□□ -1.07
BEST1-201ENST00000378043 ZMAT4Q9H898 229 aa8.34□□□□□ -1.07
BEST1-201ENST00000378043 HHLA3Q9XRX5 114 aa8.34□□□□□ -1.07
BEST1-201ENST00000378043 MOB4Q9Y3A3 225 aa8.34□□□□□ -1.07
BEST1-201ENST00000378043 TRAV26-2A0A0B4J265 109 aa8.33□□□□□ -1.08
BEST1-201ENST00000378043 CRIP2P52943 208 aaPredicted RBP8.33□□□□□ -1.08
BEST1-201ENST00000378043 RBX1P62877 108 aa8.33□□□□□ -1.08
BEST1-201ENST00000378043 NRACQ8N912 160 aa8.33□□□□□ -1.08
BEST1-201ENST00000378043 HIF1ANQ9NWT6 349 aa8.33□□□□□ -1.08
BEST1-201ENST00000378043 C7orf71A4D174 169 aa8.33□□□□□ -1.08
BEST1-201ENST00000378043 TMEM158Q8WZ71 300 aa8.33□□□□□ -1.08
BEST1-201ENST00000378043 CBY1Q9Y3M2 126 aa8.33□□□□□ -1.08
BEST1-201ENST00000378043 CFAP46Q8IYW2 2715 aa8.33□□□□□ -1.08
BEST1-201ENST00000378043 UTP20O75691 2785 aaKnown RBP8.32□□□□□ -1.08
BEST1-201ENST00000378043 IGKV2D-26A0A0A0MRZ7 120 aa8.32□□□□□ -1.08
BEST1-201ENST00000378043 IGHV1-69DA0A0B4J2H0 117 aa8.32□□□□□ -1.08
BEST1-201ENST00000378043 FAM223BA6NKX1 122 aa8.32□□□□□ -1.08
BEST1-201ENST00000378043 IGHV1-69P01742 117 aa8.32□□□□□ -1.08
BEST1-201ENST00000378043 SEC11AP67812 179 aa8.32□□□□□ -1.08
BEST1-201ENST00000378043 FAM223AQ8IWN6 122 aa8.32□□□□□ -1.08
BEST1-201ENST00000378043 Q8N8P6 123 aa8.32□□□□□ -1.08
BEST1-201ENST00000378043 OR2K2Q8NGT1 345 aa8.32□□□□□ -1.08
BEST1-201ENST00000378043 C16orf92Q96LL3 132 aa8.32□□□□□ -1.08
BEST1-201ENST00000378043 CENPEQ02224 2701 aa8.32□□□□□ -1.08
BEST1-201ENST00000378043 IGHV4-4A0A075B6R2 117 aa8.32□□□□□ -1.08
BEST1-201ENST00000378043 NMUP48645 174 aa8.32□□□□□ -1.08
BEST1-201ENST00000378043 DEFB1P60022 68 aa8.32□□□□□ -1.08
BEST1-201ENST00000378043 ATP6V0BQ99437 205 aa8.32□□□□□ -1.08
BEST1-201ENST00000378043 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP8.32□□□□□ -1.08
BEST1-201ENST00000378043 TRAV40A0A0B4J280 105 aa8.31□□□□□ -1.08
BEST1-201ENST00000378043 IGHV4-61A0A0C4DH41 118 aa8.31□□□□□ -1.08
BEST1-201ENST00000378043 A1L4Q6 167 aa8.31□□□□□ -1.08
BEST1-201ENST00000378043 GNLYP22749 145 aa8.31□□□□□ -1.08
BEST1-201ENST00000378043 ARL3P36405 182 aa8.31□□□□□ -1.08
BEST1-201ENST00000378043 OR9G4Q8NGQ1 327 aa8.31□□□□□ -1.08
BEST1-201ENST00000378043 PRSS47A8MTI9 375 aa8.31□□□□□ -1.08
BEST1-201ENST00000378043 SIVA1O15304 175 aa8.31□□□□□ -1.08
BEST1-201ENST00000378043 TTTY13Q9BZ97 58 aa8.31□□□□□ -1.08
BEST1-201ENST00000378043 PKD1L2Q7Z442 2459 aa8.31□□□□□ -1.08
BEST1-201ENST00000378043 FLNCQ14315 2725 aa8.31□□□□□ -1.08
BEST1-201ENST00000378043 H3BVH4 76 aa8.31□□□□□ -1.08
BEST1-201ENST00000378043 SOCS3O14543 225 aa8.31□□□□□ -1.08
BEST1-201ENST00000378043 IGHV4-38-2P0DP08 117 aa8.31□□□□□ -1.08
BEST1-201ENST00000378043 C9orf139Q6ZV77 190 aa8.31□□□□□ -1.08
BEST1-201ENST00000378043 ZFAND2AQ8N6M9 145 aa8.31□□□□□ -1.08
BEST1-201ENST00000378043 MEGF9Q9H1U4 602 aa8.31□□□□□ -1.08
BEST1-201ENST00000378043 UFC1Q9Y3C8 167 aa8.31□□□□□ -1.08
BEST1-201ENST00000378043 SPRY2O43597 315 aa8.3□□□□□ -1.08
BEST1-201ENST00000378043 PRSS1P07477 247 aa8.3□□□□□ -1.08
BEST1-201ENST00000378043 SMIM17P0DL12 118 aa8.3□□□□□ -1.08
BEST1-201ENST00000378043 KLK15Q9H2R5 256 aa8.3□□□□□ -1.08
BEST1-201ENST00000378043 PRORYQ9H606 182 aa8.3□□□□□ -1.08
BEST1-201ENST00000378043 PEF1Q9UBV8 284 aaKnown RBP8.3□□□□□ -1.08
BEST1-201ENST00000378043 J3KRW8 73 aa8.3□□□□□ -1.08
BEST1-201ENST00000378043 HSD52Q0P140 79 aa8.3□□□□□ -1.08
BEST1-201ENST00000378043 SPANXN1Q5VSR9 72 aa8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms