RNA–Protein interactions for RNA: ENST00000376570.8

DDR1-227, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene DDR1, Length 3,820 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-227ENST00000376570 FAM106AQ4KMX7 169 aa9.12□□□□□ -0.95
DDR1-227ENST00000376570 OR4X2Q8NGF9 303 aa9.12□□□□□ -0.95
DDR1-227ENST00000376570 CENPVL3A0A0U1RRI6 287 aa9.12□□□□□ -0.95
DDR1-227ENST00000376570 GAGE12BA1L429 117 aa9.12□□□□□ -0.95
DDR1-227ENST00000376570 IGF1P05019 195 aa9.12□□□□□ -0.95
DDR1-227ENST00000376570 OR10AG1Q8NH19 301 aa9.12□□□□□ -0.95
DDR1-227ENST00000376570 C11orf52Q96A22 123 aa9.12□□□□□ -0.95
DDR1-227ENST00000376570 ZNF256Q9Y2P7 627 aaPredicted RBP9.12□□□□□ -0.95
DDR1-227ENST00000376570 PSMG4Q5JS54 123 aa9.11□□□□□ -0.95
DDR1-227ENST00000376570 ZNF502Q8TBZ5 544 aa9.11□□□□□ -0.95
DDR1-227ENST00000376570 A0A087WWL8 130 aa9.11□□□□□ -0.95
DDR1-227ENST00000376570 IGHV1-24A0A0C4DH33 117 aa9.11□□□□□ -0.95
DDR1-227ENST00000376570 TOMM40O96008 361 aa9.11□□□□□ -0.95
DDR1-227ENST00000376570 CTSGP08311 255 aa9.11□□□□□ -0.95
DDR1-227ENST00000376570 SYNJ2BPP57105 145 aa9.11□□□□□ -0.95
DDR1-227ENST00000376570 PSG9Q00887 426 aa9.11□□□□□ -0.95
DDR1-227ENST00000376570 C3orf36Q3SXR2 165 aa9.11□□□□□ -0.95
DDR1-227ENST00000376570 C14orf178Q8N769 122 aaPredicted RBP9.11□□□□□ -0.95
DDR1-227ENST00000376570 TRAV12-3A0A0B4J271 114 aa9.11□□□□□ -0.95
DDR1-227ENST00000376570 KIR3DS1Q14943 382 aa9.11□□□□□ -0.95
DDR1-227ENST00000376570 Q8N9W7 124 aa9.11□□□□□ -0.95
DDR1-227ENST00000376570 ORAOV1Q8WV07 137 aa9.11□□□□□ -0.95
DDR1-227ENST00000376570 ZNF414Q96IQ9 312 aa9.11□□□□□ -0.95
DDR1-227ENST00000376570 TTTY13Q9BZ97 58 aa9.11□□□□□ -0.95
DDR1-227ENST00000376570 CST9LQ9H4G1 147 aa9.1□□□□□ -0.95
DDR1-227ENST00000376570 VWC2LB2RUY7 222 aa9.1□□□□□ -0.95
DDR1-227ENST00000376570 SAP30O75446 220 aa9.1□□□□□ -0.95
DDR1-227ENST00000376570 EGR2P11161 476 aaPredicted RBP9.1□□□□□ -0.95
DDR1-227ENST00000376570 UNQ9165/PRO28630Q6UXU0 137 aa9.1□□□□□ -0.95
DDR1-227ENST00000376570 IGF2BP2-AS1Q96M15 143 aa9.1□□□□□ -0.95
DDR1-227ENST00000376570 KNCNA6PVL3 124 aa9.1□□□□□ -0.95
DDR1-227ENST00000376570 M0R1W7 72 aa9.1□□□□□ -0.95
DDR1-227ENST00000376570 NDUFA3O95167 84 aa9.1□□□□□ -0.95
DDR1-227ENST00000376570 BMI1P35226 326 aa9.1□□□□□ -0.95
DDR1-227ENST00000376570 THAP8Q8NA92 274 aa9.1□□□□□ -0.95
DDR1-227ENST00000376570 FOXC2Q99958 501 aa9.1□□□□□ -0.95
DDR1-227ENST00000376570 SMIM27A0A1W2PRY6 76 aa9.09□□□□□ -0.95
DDR1-227ENST00000376570 A6NDN8 102 aa9.09□□□□□ -0.95
DDR1-227ENST00000376570 LEPP41159 167 aa9.09□□□□□ -0.95
DDR1-227ENST00000376570 SRSF2Q01130 221 aaKnown RBP9.09□□□□□ -0.95
DDR1-227ENST00000376570 SIGLEC15Q6ZMC9 328 aa9.09□□□□□ -0.95
DDR1-227ENST00000376570 IGHV3-64A0A075B6Q5 118 aa9.09□□□□□ -0.95
DDR1-227ENST00000376570 FABP5P3A8MUU1 101 aa9.09□□□□□ -0.95
DDR1-227ENST00000376570 EDN2P20800 178 aa9.09□□□□□ -0.95
DDR1-227ENST00000376570 LOXL1Q08397 574 aaPredicted RBP9.09□□□□□ -0.95
DDR1-227ENST00000376570 PEF1Q9UBV8 284 aaKnown RBP9.09□□□□□ -0.95
DDR1-227ENST00000376570 UBE2E1P51965 193 aa9.09□□□□□ -0.95
DDR1-227ENST00000376570 GAGE1Q13065 139 aa9.09□□□□□ -0.95
DDR1-227ENST00000376570 SAPCD1Q5SSQ6 148 aa9.09□□□□□ -0.95
DDR1-227ENST00000376570 TEX15Q9BXT5 2789 aa9.09□□□□□ -0.96
DDR1-227ENST00000376570 CD7P09564 240 aa9.08□□□□□ -0.96
DDR1-227ENST00000376570 C1orf122Q6ZSJ8 110 aa9.08□□□□□ -0.96
DDR1-227ENST00000376570 RHPN1-AS1Q9BWJ2 59 aa9.08□□□□□ -0.96
DDR1-227ENST00000376570 FAM231BA6NCW3 169 aa9.08□□□□□ -0.96
DDR1-227ENST00000376570 ZNF80P51504 273 aaPredicted RBP9.08□□□□□ -0.96
DDR1-227ENST00000376570 OCIAD2Q56VL3 154 aa9.08□□□□□ -0.96
DDR1-227ENST00000376570 TMEM97Q5BJF2 176 aa9.08□□□□□ -0.96
DDR1-227ENST00000376570 ORMDL3Q8N138 153 aa9.08□□□□□ -0.96
DDR1-227ENST00000376570 NCOR1P1Q9H4R4 102 aa9.08□□□□□ -0.96
DDR1-227ENST00000376570 KLK9Q9UKQ9 250 aa9.08□□□□□ -0.96
DDR1-227ENST00000376570 MOB4Q9Y3A3 225 aa9.08□□□□□ -0.96
DDR1-227ENST00000376570 SPCS1Q9Y6A9 102 aa9.08□□□□□ -0.96
DDR1-227ENST00000376570 IGKV3OR2-268A0A0C4DH90 116 aa9.08□□□□□ -0.96
DDR1-227ENST00000376570 H3BRN7 92 aa9.08□□□□□ -0.96
DDR1-227ENST00000376570 IGHV1-69DA0A0B4J2H0 117 aa9.07□□□□□ -0.96
DDR1-227ENST00000376570 H7C2G1 150 aa9.07□□□□□ -0.96
DDR1-227ENST00000376570 IGHV1-69P01742 117 aa9.07□□□□□ -0.96
DDR1-227ENST00000376570 NPFFR1Q9GZQ6 430 aa9.07□□□□□ -0.96
DDR1-227ENST00000376570 NHP2Q9NX24 153 aaKnown RBP9.07□□□□□ -0.96
DDR1-227ENST00000376570 IGKV3D-20A0A0C4DH25 116 aa9.07□□□□□ -0.96
DDR1-227ENST00000376570 PRR25Q96S07 402 aa9.07□□□□□ -0.96
DDR1-227ENST00000376570 JMJD8Q96S16 334 aa9.07□□□□□ -0.96
DDR1-227ENST00000376570 GAS8-AS1O95177 125 aa9.07□□□□□ -0.96
DDR1-227ENST00000376570 MSMBP08118 114 aa9.07□□□□□ -0.96
DDR1-227ENST00000376570 ZNF56Q15929 161 aa9.07□□□□□ -0.96
DDR1-227ENST00000376570 DEFB112Q30KQ8 113 aa9.07□□□□□ -0.96
DDR1-227ENST00000376570 C8orf86Q6ZUL3 223 aa9.07□□□□□ -0.96
DDR1-227ENST00000376570 SPATA12Q7Z6I5 190 aa9.07□□□□□ -0.96
DDR1-227ENST00000376570 DYNLRB2Q8TF09 96 aa9.07□□□□□ -0.96
DDR1-227ENST00000376570 MRPS16Q9Y3D3 137 aaKnown RBP9.07□□□□□ -0.96
DDR1-227ENST00000376570 NPYP01303 97 aa9.06□□□□□ -0.96
DDR1-227ENST00000376570 LMO4P61968 165 aa9.06□□□□□ -0.96
DDR1-227ENST00000376570 SMAGPQ0VAQ4 97 aa9.06□□□□□ -0.96
DDR1-227ENST00000376570 GTSCR1Q86UQ5 136 aa9.06□□□□□ -0.96
DDR1-227ENST00000376570 MAP1LC3AQ9H492 121 aa9.06□□□□□ -0.96
DDR1-227ENST00000376570 LY96Q9Y6Y9 160 aa9.06□□□□□ -0.96
DDR1-227ENST00000376570 GNRH2O43555 120 aa9.06□□□□□ -0.96
DDR1-227ENST00000376570 PRM2P04554 102 aa9.06□□□□□ -0.96
DDR1-227ENST00000376570 FABP2P12104 132 aa9.06□□□□□ -0.96
DDR1-227ENST00000376570 OR11H6Q8NGC7 330 aa9.06□□□□□ -0.96
DDR1-227ENST00000376570 AGPAT4-IT1Q9H0P7 198 aa9.06□□□□□ -0.96
DDR1-227ENST00000376570 ST20Q9HBF5 79 aa9.06□□□□□ -0.96
DDR1-227ENST00000376570 MRPL27Q9P0M9 148 aaKnown RBP9.06□□□□□ -0.96
DDR1-227ENST00000376570 HRNRQ86YZ3 2850 aaPredicted RBP9.06□□□□□ -0.96
DDR1-227ENST00000376570 IGLV11-55A0A075B6I3 123 aa9.06□□□□□ -0.96
DDR1-227ENST00000376570 CFHR4Q92496 578 aa9.06□□□□□ -0.96
DDR1-227ENST00000376570 ATRQ13535 2644 aa9.05□□□□□ -0.96
DDR1-227ENST00000376570 BVES-AS1Q5T3Y7 98 aa9.05□□□□□ -0.96
DDR1-227ENST00000376570 SPINK13Q1W4C9 94 aa9.05□□□□□ -0.96
DDR1-227ENST00000376570 GTSF1LQ9H1H1 148 aa9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms