RNA–Protein interactions for RNA: ENST00000376395.8

UBQLN1-202, Transcript of ubiquilin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBQLN1, Length 4,118 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN1-202ENST00000376395 ZNF815PA8K554 130 aa11.65□□□□□ -0.55
UBQLN1-202ENST00000376395 SHISA9B4DS77 424 aa11.65□□□□□ -0.55
UBQLN1-202ENST00000376395 PRTN3P24158 256 aa11.65□□□□□ -0.55
UBQLN1-202ENST00000376395 ATP5J2P56134 94 aa11.65□□□□□ -0.55
UBQLN1-202ENST00000376395 GTSF1LQ9H1H1 148 aa11.65□□□□□ -0.55
UBQLN1-202ENST00000376395 TMEM14CQ9P0S9 112 aa11.65□□□□□ -0.55
UBQLN1-202ENST00000376395 CD7P09564 240 aa11.64□□□□□ -0.55
UBQLN1-202ENST00000376395 KLRB1Q12918 225 aa11.64□□□□□ -0.55
UBQLN1-202ENST00000376395 OR5A1Q8NGJ0 315 aa11.64□□□□□ -0.55
UBQLN1-202ENST00000376395 I3L2K1 104 aa11.64□□□□□ -0.55
UBQLN1-202ENST00000376395 TAX1BP3O14907 124 aa11.64□□□□□ -0.55
UBQLN1-202ENST00000376395 C3orf36Q3SXR2 165 aa11.64□□□□□ -0.55
UBQLN1-202ENST00000376395 PIP4P1Q86T03 277 aa11.64□□□□□ -0.55
UBQLN1-202ENST00000376395 CHTOPQ9Y3Y2 248 aaKnown RBP11.64□□□□□ -0.55
UBQLN1-202ENST00000376395 IGHV2-70DA0A0C4DH43 119 aa11.64□□□□□ -0.55
UBQLN1-202ENST00000376395 SONP18583 2426 aaKnown RBP11.63□□□□□ -0.55
UBQLN1-202ENST00000376395 IGHV3-64A0A075B6Q5 118 aa11.63□□□□□ -0.55
UBQLN1-202ENST00000376395 IGHV3OR16-12A0A075B7B8 117 aa11.63□□□□□ -0.55
UBQLN1-202ENST00000376395 A0A1B0GXF2 115 aa11.63□□□□□ -0.55
UBQLN1-202ENST00000376395 TEX22C9J3V5 150 aa11.63□□□□□ -0.55
UBQLN1-202ENST00000376395 SAMD13Q5VXD3 122 aa11.63□□□□□ -0.55
UBQLN1-202ENST00000376395 KLF12Q9Y4X4 402 aa11.63□□□□□ -0.55
UBQLN1-202ENST00000376395 ATP6V0E1O15342 81 aa11.63□□□□□ -0.55
UBQLN1-202ENST00000376395 CEACAM4O75871 244 aa11.63□□□□□ -0.55
UBQLN1-202ENST00000376395 DEFB125Q8N687 156 aa11.63□□□□□ -0.55
UBQLN1-202ENST00000376395 TRAV21A0A0B4J279 112 aa11.62□□□□□ -0.55
UBQLN1-202ENST00000376395 C19orf71A6NCJ1 209 aa11.62□□□□□ -0.55
UBQLN1-202ENST00000376395 SAA4P35542 130 aa11.62□□□□□ -0.55
UBQLN1-202ENST00000376395 EFNA4P52798 201 aa11.62□□□□□ -0.55
UBQLN1-202ENST00000376395 MLST8Q9BVC4 326 aa11.62□□□□□ -0.55
UBQLN1-202ENST00000376395 KAAG1Q9UBP8 84 aa11.62□□□□□ -0.55
UBQLN1-202ENST00000376395 PSMB11A5LHX3 300 aa11.62□□□□□ -0.55
UBQLN1-202ENST00000376395 LY6DQ14210 128 aa11.62□□□□□ -0.55
UBQLN1-202ENST00000376395 UCNP55089 124 aa11.62□□□□□ -0.55
UBQLN1-202ENST00000376395 C7orf69Q9H7B7 122 aa11.62□□□□□ -0.55
UBQLN1-202ENST00000376395 K7EP13 123 aa11.61□□□□□ -0.55
UBQLN1-202ENST00000376395 PRO3102Q9H379 93 aa11.61□□□□□ -0.55
UBQLN1-202ENST00000376395 CFAP47Q6ZTR5 3102 aa11.61□□□□□ -0.55
UBQLN1-202ENST00000376395 RPL13AP40429 203 aaKnown RBP11.61□□□□□ -0.55
UBQLN1-202ENST00000376395 DYNAPQ8N1N2 210 aa11.61□□□□□ -0.55
UBQLN1-202ENST00000376395 SCRT2Q9NQ03 307 aa11.61□□□□□ -0.55
UBQLN1-202ENST00000376395 MRPL35Q9NZE8 188 aaKnown RBP11.61□□□□□ -0.55
UBQLN1-202ENST00000376395 TRAV41A0A0B4J266 112 aa11.6□□□□□ -0.55
UBQLN1-202ENST00000376395 LGALS9BQ3B8N2 356 aa11.6□□□□□ -0.55
UBQLN1-202ENST00000376395 ORMDL2Q53FV1 153 aa11.6□□□□□ -0.55
UBQLN1-202ENST00000376395 LGALS9CQ6DKI2 356 aa11.6□□□□□ -0.55
UBQLN1-202ENST00000376395 SYT8Q8NBV8 401 aa11.6□□□□□ -0.55
UBQLN1-202ENST00000376395 PRSS22Q9GZN4 317 aa11.6□□□□□ -0.55
UBQLN1-202ENST00000376395 C9orf118A6NHY6 69 aa11.6□□□□□ -0.55
UBQLN1-202ENST00000376395 IGLV1-47P01700 117 aa11.6□□□□□ -0.55
UBQLN1-202ENST00000376395 Q5PR19 223 aa11.6□□□□□ -0.55
UBQLN1-202ENST00000376395 AMTNQ6UX39 209 aa11.6□□□□□ -0.55
UBQLN1-202ENST00000376395 NEGR1Q7Z3B1 354 aa11.6□□□□□ -0.55
UBQLN1-202ENST00000376395 DTX2Q86UW9 622 aa11.6□□□□□ -0.55
UBQLN1-202ENST00000376395 BPESC1Q9GZL8 116 aa11.6□□□□□ -0.55
UBQLN1-202ENST00000376395 PRAC2D3DTV9 90 aa11.59□□□□□ -0.55
UBQLN1-202ENST00000376395 HOXA3O43365 443 aaPredicted RBP11.59□□□□□ -0.55
UBQLN1-202ENST00000376395 GAGE13Q4V321 117 aa11.59□□□□□ -0.55
UBQLN1-202ENST00000376395 PSMG4Q5JS54 123 aa11.59□□□□□ -0.55
UBQLN1-202ENST00000376395 DEFB1P60022 68 aa11.59□□□□□ -0.55
UBQLN1-202ENST00000376395 MYO18BQ8IUG5 2567 aa11.59□□□□□ -0.55
UBQLN1-202ENST00000376395 PCSK5Q92824 1860 aa11.59□□□□□ -0.55
UBQLN1-202ENST00000376395 H3BRM9 83 aa11.59□□□□□ -0.55
UBQLN1-202ENST00000376395 M0R1W7 72 aa11.59□□□□□ -0.55
UBQLN1-202ENST00000376395 CRYGCP07315 174 aa11.59□□□□□ -0.55
UBQLN1-202ENST00000376395 SRSF8Q9BRL6 282 aaKnown RBP11.59□□□□□ -0.55
UBQLN1-202ENST00000376395 LINC01545Q5VT33 79 aa11.58□□□□□ -0.55
UBQLN1-202ENST00000376395 URB1-AS1Q96HZ7 61 aa11.58□□□□□ -0.55
UBQLN1-202ENST00000376395 SMPXQ9UHP9 88 aa11.58□□□□□ -0.55
UBQLN1-202ENST00000376395 ETDBQ3ZM63 59 aa11.58□□□□□ -0.56
UBQLN1-202ENST00000376395 ADAMTSL5Q6ZMM2 481 aa11.58□□□□□ -0.56
UBQLN1-202ENST00000376395 A0A087WWL8 130 aa11.58□□□□□ -0.56
UBQLN1-202ENST00000376395 NPFFR1Q9GZQ6 430 aa11.58□□□□□ -0.56
UBQLN1-202ENST00000376395 ZNF688P0C7X2 276 aa11.58□□□□□ -0.56
UBQLN1-202ENST00000376395 SNRPD3P62318 126 aaKnown RBP11.58□□□□□ -0.56
UBQLN1-202ENST00000376395 PIMREGQ9BSJ6 248 aa11.58□□□□□ -0.56
UBQLN1-202ENST00000376395 ADGRG4Q8IZF6 3080 aa11.57□□□□□ -0.56
UBQLN1-202ENST00000376395 HIVEP3Q5T1R4 2406 aa11.57□□□□□ -0.56
UBQLN1-202ENST00000376395 MINOS1Q5TGZ0 78 aa11.57□□□□□ -0.56
UBQLN1-202ENST00000376395 MINOS1-NBL1R4GNA1 71 aa11.57□□□□□ -0.56
UBQLN1-202ENST00000376395 FCN3O75636 299 aa11.57□□□□□ -0.56
UBQLN1-202ENST00000376395 SIGMAR1Q99720 223 aa11.57□□□□□ -0.56
UBQLN1-202ENST00000376395 CSTL1Q9H114 145 aa11.57□□□□□ -0.56
UBQLN1-202ENST00000376395 CRIP1P50238 77 aa11.57□□□□□ -0.56
UBQLN1-202ENST00000376395 DYNLRB2Q8TF09 96 aa11.57□□□□□ -0.56
UBQLN1-202ENST00000376395 TRAV12-3A0A0B4J271 114 aa11.56□□□□□ -0.56
UBQLN1-202ENST00000376395 ZNF80P51504 273 aaPredicted RBP11.56□□□□□ -0.56
UBQLN1-202ENST00000376395 FOXE3Q13461 319 aa11.56□□□□□ -0.56
UBQLN1-202ENST00000376395 PAX2Q02962 417 aa11.56□□□□□ -0.56
UBQLN1-202ENST00000376395 C8orf86Q6ZUL3 223 aa11.56□□□□□ -0.56
UBQLN1-202ENST00000376395 LINC00574Q9H8X3 128 aa11.56□□□□□ -0.56
UBQLN1-202ENST00000376395 PGPEP1Q9NXJ5 209 aa11.56□□□□□ -0.56
UBQLN1-202ENST00000376395 TRAV2A0A0B4J234 112 aa11.55□□□□□ -0.56
UBQLN1-202ENST00000376395 IGKV3D-20A0A0C4DH25 116 aa11.55□□□□□ -0.56
UBQLN1-202ENST00000376395 H3BUX3 64 aa11.55□□□□□ -0.56
UBQLN1-202ENST00000376395 H7C1H1 209 aa11.55□□□□□ -0.56
UBQLN1-202ENST00000376395 PPP1R17O96001 155 aa11.55□□□□□ -0.56
UBQLN1-202ENST00000376395 CFHR4Q92496 578 aa11.55□□□□□ -0.56
UBQLN1-202ENST00000376395 MYCNOSP40205 109 aa11.55□□□□□ -0.56
UBQLN1-202ENST00000376395 AGPAT4-IT1Q9H0P7 198 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 125.2 ms